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The map label for this gene is ygaV [C]

Identifier: 117920780

GI number: 117920780

Start: 2811250

End: 2811537

Strand: Reverse

Name: ygaV [C]

Synonym: Shewana3_2337

Alternate gene names: 117920780

Gene position: 2811537-2811250 (Counterclockwise)

Preceding gene: 117920783

Following gene: 117920779

Centisome position: 56.55

GC content: 46.53

Gene sequence:

>288_bases
ATGAATACAGAAAATGCAGCTAAAGTATTGAAGGAGCTAGGGCATCCCACTCGTCTTGCCCTGTTCAGAATATTGGTAAA
AGGCGGTTATGGGGGCGTTGCCGTGGGGCAATTACAGGAAGCATTACAGATCCCAGGTTCAACACTCTCACACCATATTA
GCGCCTTAATGTCGGCCGGCATTATCTCCCAGCGGCGTGAGGGCAGGGTGTTATATTGTGTGCCTGACTATGAATTATTA
CAGGGACTGGTGCATTTTTTACAGGATCAATGTTGTAGTGAACAATGA

Upstream 100 bases:

>100_bases
TCCCTAGGCTGTTTGCCCTTCATTTTGACGTCGCTCGTGAATAGATATTTCTGGTATTATCGAATAACTTAACAAATGAC
TCTGAAATCACAGTACCGAT

Downstream 100 bases:

>100_bases
GACGTTTGTTAGGGGATGATAAATCCTTTGATATGGATATTTACATATACGATAATTCGTATATAGTGTCGGTATCTTTA
TAAGGACTCATTCCTATGAA

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator; Transcriptional Regulator ArsR Family Protein; Arsenic Operon Regulator; ArsR Family Regulatory Protein; ArsR Operon Regulator ArsI; Transcriptional Regulator ArsR Domain; Transcription Regulator ArsR; Transcriptional Regulator ArsR; Arsenical Resistance Transcriptional Regulator; Arsenical Resistance Transcriptional Regulator Arsr

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MNTENAAKVLKELGHPTRLALFRILVKGGYGGVAVGQLQEALQIPGSTLSHHISALMSAGIISQRREGRVLYCVPDYELL
QGLVHFLQDQCCSEQ

Sequences:

>Translated_95_residues
MNTENAAKVLKELGHPTRLALFRILVKGGYGGVAVGQLQEALQIPGSTLSHHISALMSAGIISQRREGRVLYCVPDYELL
QGLVHFLQDQCCSEQ
>Mature_95_residues
MNTENAAKVLKELGHPTRLALFRILVKGGYGGVAVGQLQEALQIPGSTLSHHISALMSAGIISQRREGRVLYCVPDYELL
QGLVHFLQDQCCSEQ

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10375; Mature: 10375

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTENAAKVLKELGHPTRLALFRILVKGGYGGVAVGQLQEALQIPGSTLSHHISALMSAG
CCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IISQRREGRVLYCVPDYELLQGLVHFLQDQCCSEQ
HHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNTENAAKVLKELGHPTRLALFRILVKGGYGGVAVGQLQEALQIPGSTLSHHISALMSAG
CCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IISQRREGRVLYCVPDYELLQGLVHFLQDQCCSEQ
HHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA