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The map label for this gene is iscA [H]

Identifier: 117920721

GI number: 117920721

Start: 2741297

End: 2741620

Strand: Reverse

Name: iscA [H]

Synonym: Shewana3_2278

Alternate gene names: 117920721

Gene position: 2741620-2741297 (Counterclockwise)

Preceding gene: 117920722

Following gene: 117920720

Centisome position: 55.14

GC content: 45.68

Gene sequence:

>324_bases
ATGGCGATTACAATGACCCCAGCGGCAACTGAGCGTGTCAGATCTTTCTTAGCGAATCGAGGCAAGGGCATCGGCCTGCG
CCTCGGCTTAAAGACCTCTGGCTGTTCGGGTATGGCGTATGTGCTTGAGTTTGTTGATGCGCTGAATGATGACGATGAAG
TGTATGATATTGATGGTGTTAAAATCATTATCGATGCGAAAAGCTTCATCTATCTACAGGGCATTGAGTTGGATTTTGTT
AAAGAAGGCCTGAACGAAGGTTTCCAATTTAACAATCCTAACGCAAAAGGTGAGTGCGGTTGCGGTGAGAGTTTCACTGT
TTAA

Upstream 100 bases:

>100_bases
CACCGGTGAAAATCCACTGTTCCATTTTGGCAGAAGATGCCATTAAAGCGGCAATCGACGAGTACAAATCGAAACAAGCT
AAGTAACATCTGGAGTTAAG

Downstream 100 bases:

>100_bases
TTGCCGAATTGACGCATGAATTATTTCGAGCTGTTTAAGTTTTCCCCTGCCTTCGATATTGACACCGCTGTGCTTGCAGA
ACGCTACCGCGAACTGCAAC

Product: iron-sulfur cluster assembly protein IscA

Products: NA

Alternate protein names: Iron-sulfur cluster assembly protein [H]

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MAITMTPAATERVRSFLANRGKGIGLRLGLKTSGCSGMAYVLEFVDALNDDDEVYDIDGVKIIIDAKSFIYLQGIELDFV
KEGLNEGFQFNNPNAKGECGCGESFTV

Sequences:

>Translated_107_residues
MAITMTPAATERVRSFLANRGKGIGLRLGLKTSGCSGMAYVLEFVDALNDDDEVYDIDGVKIIIDAKSFIYLQGIELDFV
KEGLNEGFQFNNPNAKGECGCGESFTV
>Mature_106_residues
AITMTPAATERVRSFLANRGKGIGLRLGLKTSGCSGMAYVLEFVDALNDDDEVYDIDGVKIIIDAKSFIYLQGIELDFVK
EGLNEGFQFNNPNAKGECGCGESFTV

Specific function: Is able to transfer iron-sulfur clusters to apo- ferredoxin. Multiple cycles of [2Fe2S] cluster formation and transfer are observed, suggesting that iscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transi

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=106, Percent_Identity=41.5094339622642, Blast_Score=108, Evalue=1e-24,
Organism=Homo sapiens, GI160420328, Length=83, Percent_Identity=36.144578313253, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1788877, Length=107, Percent_Identity=65.4205607476635, Blast_Score=150, Evalue=2e-38,
Organism=Escherichia coli, GI1787974, Length=105, Percent_Identity=44.7619047619048, Blast_Score=109, Evalue=4e-26,
Organism=Escherichia coli, GI1786351, Length=110, Percent_Identity=38.1818181818182, Blast_Score=71, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI25146411, Length=106, Percent_Identity=40.5660377358491, Blast_Score=96, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI193209025, Length=106, Percent_Identity=40.5660377358491, Blast_Score=96, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6323001, Length=105, Percent_Identity=41.9047619047619, Blast_Score=95, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24642263, Length=106, Percent_Identity=44.3396226415094, Blast_Score=106, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870
- InterPro:   IPR011302 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 11592; Mature: 11461

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITMTPAATERVRSFLANRGKGIGLRLGLKTSGCSGMAYVLEFVDALNDDDEVYDIDGV
CEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEECCCE
KIIIDAKSFIYLQGIELDFVKEGLNEGFQFNNPNAKGECGCGESFTV
EEEEECCCEEEEECCCHHHHHHHHHCCCEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AITMTPAATERVRSFLANRGKGIGLRLGLKTSGCSGMAYVLEFVDALNDDDEVYDIDGV
EEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEECCCE
KIIIDAKSFIYLQGIELDFVKEGLNEGFQFNNPNAKGECGCGESFTV
EEEEECCCEEEEECCCHHHHHHHHHCCCEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA