| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920626
Identifier: 117920626
GI number: 117920626
Start: 2616153
End: 2618924
Strand: Reverse
Name: 117920626
Synonym: Shewana3_2182
Alternate gene names: NA
Gene position: 2618924-2616153 (Counterclockwise)
Preceding gene: 117920627
Following gene: 117920625
Centisome position: 52.67
GC content: 42.06
Gene sequence:
>2772_bases ATGAGCACCGAAAAGGATATTGAACAAGTGAACAGACAAGACCAAAACATTATACAAGATCTCGCGATGGCATTTAGTCC GCCAGTATACCCTCAAGTATTGAACGTTCAGGTGACTAAAGCGTATTGGACACCACATGCTATGGCCTTGTTTGCTGACA TCTATAAACTGGCCGAACAACACTTTATAAAACAAGGAGCTAAAGACAAAAATGTAACATTACCTACATCGGCATTACGT AATTTGTTACATGGCAGCTTGCCCAACCTACTTTCGACCAATCAGTATCTAGGACTAGGACCACACTCTCTATATCGCAA AGACATATCACTGTGTGGCTTGTTTAAGCAAAATATACATACTGTAGAACGATTCTATGCATGCTTGGATGAGTGGATTG AGCATGACATGACAGGTTTTATTGAACGCTATGATATTCCGGATCATTTCCGCGAGGAAATGTACGGTTTGGCAGATAAC ACCTCGTTAGTAACTTTTACGGATGATTCACTTTGTCTCTATCCATGGATTTCCCCGCATGTTGATACGGCACCATCTCT TGGAGAGCGTTTGACTATATCAGCCAATGACATCGCTGTTCTGCTGGAAGGTGAAGTGATTTTTCCTGAGTTACCACCTG TTCGTCGTGTTGCTGGGCACGGAGGTAATCGAGCAGAATTAGTGACACTTCCCATTAATGATCACCAAGAGGGACGATTC AGTTTGGTTTGTGAAATCTCAGTCGAAACCTTGCCAACTGATAATACTCCAATAATCAACATTAACTTCAAAAAACGCAG ATGGTTGGAAAGCTTAAATAATGATTACACCCGAGCACTCACAAAAAGTGGATATCTCATAGAGTCTGAAGGTACTCGCG CTTATCATTTTTGTCTGGAAAAAAATCAAACTAATAATTGGAAGTGGACACCAGATAGCGCATTTTCCGCCTTGGAACGT CGCTTTGACCTTACATTTACAGAGGCTTTGATGTTTCAGGAGCCTTCTGACCAAAGCGATTTCATTGGAATAGTGCATGA CTATGAAAATGAAGGTGATCAAAAAAACGAAATTGGAGCTGGAGTCCCCGAAAAGGATAGAAAAGACGCATTTGATCTCA TCTCTCAAATTTTGTCAAAATTTGGCTTTACACCGTTTAGTGCATTTGAACGAGTCAAAAGCCCGATTAAAGCGTTTTCT AACGTGACTTATATGAGCAAGTTAGTCAAAGATAAACCGACGGATATCAAGCTTGAGGCGGCAGACTCACTCTATCTCGG ACAACCCCTTCCACCCTCTTTGTTTGAATATGATGATATCGATGCATTAACTGCCGGTACAAAAGTATATTTGCCCGACT TAATCCAAGGGTATCTGAGCGATGAAAATGTTACGAAACACGTGAAATCACAGACGCTTTTTCTCGTTTCACAATCTGCA GCTGAAGGGGAGGTGCTCAAACGAATTGCATATACCCTTTTTGGTGATTGCTTAACAATAAAATCTGTTTCGCTTCCCGA GCTCGTTCACGGGCCGCGGGTAGACCTACCCAGCAGTGAGGTGAAAAATAAGCACACACGAAAATCGGCTCGCAAGAAGC AATGGGAAGGTTTCGTCAAAAGTCTCTCCGAAGATTCAATGTCGTCTATATGCCTAATCCAGGCGCCTATGTTTTATGAA ACGAGTTCAGGGCCTAAACCTGACGACGAGGTGAACAAACCAGCGGCTAAATTAGCTTTTTCCAGTGAACAAGGATTCCC GGTTCAATACTTGCTACCTCCAGATACAAGGAGCAGCTCGACTACCAAACTTGAAAAATACATTATGCAGGCTCAGCAAG CTTTGCTGGATTTGATTTTCGGACATCTTGGTAAACTGCCGAACCTCTCGAAACGCACCTCTCATTACCATTCTGATGAA AAAGCACCTAAGTACCTATATGGCATTAATATGTTTACCGCGACAACTGAGACTCGTGCGAGCAAAGCTGAGATTATCGT TGCGTCCAGAGTTTGTATAGAGTCGGGATTAACCGAAATCAAAATTGCTCATAGTACAGCTCAAAATGTGATTACAGATT GGATGCCATTTAGGAATGCTATTCAATATTTAACAAAAAGATCTGAAGCAACTTTGTCCTTGGGTAAGTCATGGGGTGAC AAACAGCACTTGGTGAAAGAGTTTTGCTCGTCGATTTTAGATGAAGCACAAAAAAGTACACCTCATGCATATGTATATAT CAAAGCTGAAGGCTGCCGCAGTTATTGGAATTGGTTAGGTGATAGTGGTGTGGCTGATTTTGCCACACATGCTAAGAGTA AGTGGTCTCTGTTGAGAATCGTCAGAGTTAGAGATCAGGCACCCAAATTACTTCAGCACAAAATAGTCGACGGGCATGAT AAACCTACAACGACCCCCAGTCTATTCAAGTTGCATACAACAGACTTGCCTGTATATTGGTCGCTTGGTGAACCAATCCA ACAATATACACGAGGGTTAAGTTGCTACAGGACATTAACAGTGAGTCAGGCAAATCCCAAAACCAAAGAAAAAGTAGTGA AAACATTCTCACCAGATATAAAGCAGGCAATGCGACCAAATGCCACTGAGTTTACACTAATCAGTTCTTTACCCGAAGAT GAACCGGATACAATATCACAGTTTTCAGCTTCGCTTAGGCGCGGGTTGATGCCTGCAAGACTTGAGACTTGGGTGAAGTC TCCTTCCCCAATCTTTGTGATGAATAAATTAGAGGAGTACCTTAAACTTTAA
Upstream 100 bases:
>100_bases AAACTGAAAATTTGTTATACAGCCGACAAAGCGATTATGAAGACCCAACAGTTCAAGAGAACTACCAGCCAGGATGTTTC TTTCAGGAAGGATTAGAGTA
Downstream 100 bases:
>100_bases TTACTAACTTTTCCCTAAATATAAGTGTTTGAAGTGGAATTGGAGATTATGGGTTCTATTAAAATATCTGCTATAAAAAG ACTGTTTGCGATGTCTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 923; Mature: 922
Protein sequence:
>923_residues MSTEKDIEQVNRQDQNIIQDLAMAFSPPVYPQVLNVQVTKAYWTPHAMALFADIYKLAEQHFIKQGAKDKNVTLPTSALR NLLHGSLPNLLSTNQYLGLGPHSLYRKDISLCGLFKQNIHTVERFYACLDEWIEHDMTGFIERYDIPDHFREEMYGLADN TSLVTFTDDSLCLYPWISPHVDTAPSLGERLTISANDIAVLLEGEVIFPELPPVRRVAGHGGNRAELVTLPINDHQEGRF SLVCEISVETLPTDNTPIININFKKRRWLESLNNDYTRALTKSGYLIESEGTRAYHFCLEKNQTNNWKWTPDSAFSALER RFDLTFTEALMFQEPSDQSDFIGIVHDYENEGDQKNEIGAGVPEKDRKDAFDLISQILSKFGFTPFSAFERVKSPIKAFS NVTYMSKLVKDKPTDIKLEAADSLYLGQPLPPSLFEYDDIDALTAGTKVYLPDLIQGYLSDENVTKHVKSQTLFLVSQSA AEGEVLKRIAYTLFGDCLTIKSVSLPELVHGPRVDLPSSEVKNKHTRKSARKKQWEGFVKSLSEDSMSSICLIQAPMFYE TSSGPKPDDEVNKPAAKLAFSSEQGFPVQYLLPPDTRSSSTTKLEKYIMQAQQALLDLIFGHLGKLPNLSKRTSHYHSDE KAPKYLYGINMFTATTETRASKAEIIVASRVCIESGLTEIKIAHSTAQNVITDWMPFRNAIQYLTKRSEATLSLGKSWGD KQHLVKEFCSSILDEAQKSTPHAYVYIKAEGCRSYWNWLGDSGVADFATHAKSKWSLLRIVRVRDQAPKLLQHKIVDGHD KPTTTPSLFKLHTTDLPVYWSLGEPIQQYTRGLSCYRTLTVSQANPKTKEKVVKTFSPDIKQAMRPNATEFTLISSLPED EPDTISQFSASLRRGLMPARLETWVKSPSPIFVMNKLEEYLKL
Sequences:
>Translated_923_residues MSTEKDIEQVNRQDQNIIQDLAMAFSPPVYPQVLNVQVTKAYWTPHAMALFADIYKLAEQHFIKQGAKDKNVTLPTSALR NLLHGSLPNLLSTNQYLGLGPHSLYRKDISLCGLFKQNIHTVERFYACLDEWIEHDMTGFIERYDIPDHFREEMYGLADN TSLVTFTDDSLCLYPWISPHVDTAPSLGERLTISANDIAVLLEGEVIFPELPPVRRVAGHGGNRAELVTLPINDHQEGRF SLVCEISVETLPTDNTPIININFKKRRWLESLNNDYTRALTKSGYLIESEGTRAYHFCLEKNQTNNWKWTPDSAFSALER RFDLTFTEALMFQEPSDQSDFIGIVHDYENEGDQKNEIGAGVPEKDRKDAFDLISQILSKFGFTPFSAFERVKSPIKAFS NVTYMSKLVKDKPTDIKLEAADSLYLGQPLPPSLFEYDDIDALTAGTKVYLPDLIQGYLSDENVTKHVKSQTLFLVSQSA AEGEVLKRIAYTLFGDCLTIKSVSLPELVHGPRVDLPSSEVKNKHTRKSARKKQWEGFVKSLSEDSMSSICLIQAPMFYE TSSGPKPDDEVNKPAAKLAFSSEQGFPVQYLLPPDTRSSSTTKLEKYIMQAQQALLDLIFGHLGKLPNLSKRTSHYHSDE KAPKYLYGINMFTATTETRASKAEIIVASRVCIESGLTEIKIAHSTAQNVITDWMPFRNAIQYLTKRSEATLSLGKSWGD KQHLVKEFCSSILDEAQKSTPHAYVYIKAEGCRSYWNWLGDSGVADFATHAKSKWSLLRIVRVRDQAPKLLQHKIVDGHD KPTTTPSLFKLHTTDLPVYWSLGEPIQQYTRGLSCYRTLTVSQANPKTKEKVVKTFSPDIKQAMRPNATEFTLISSLPED EPDTISQFSASLRRGLMPARLETWVKSPSPIFVMNKLEEYLKL >Mature_922_residues STEKDIEQVNRQDQNIIQDLAMAFSPPVYPQVLNVQVTKAYWTPHAMALFADIYKLAEQHFIKQGAKDKNVTLPTSALRN LLHGSLPNLLSTNQYLGLGPHSLYRKDISLCGLFKQNIHTVERFYACLDEWIEHDMTGFIERYDIPDHFREEMYGLADNT SLVTFTDDSLCLYPWISPHVDTAPSLGERLTISANDIAVLLEGEVIFPELPPVRRVAGHGGNRAELVTLPINDHQEGRFS LVCEISVETLPTDNTPIININFKKRRWLESLNNDYTRALTKSGYLIESEGTRAYHFCLEKNQTNNWKWTPDSAFSALERR FDLTFTEALMFQEPSDQSDFIGIVHDYENEGDQKNEIGAGVPEKDRKDAFDLISQILSKFGFTPFSAFERVKSPIKAFSN VTYMSKLVKDKPTDIKLEAADSLYLGQPLPPSLFEYDDIDALTAGTKVYLPDLIQGYLSDENVTKHVKSQTLFLVSQSAA EGEVLKRIAYTLFGDCLTIKSVSLPELVHGPRVDLPSSEVKNKHTRKSARKKQWEGFVKSLSEDSMSSICLIQAPMFYET SSGPKPDDEVNKPAAKLAFSSEQGFPVQYLLPPDTRSSSTTKLEKYIMQAQQALLDLIFGHLGKLPNLSKRTSHYHSDEK APKYLYGINMFTATTETRASKAEIIVASRVCIESGLTEIKIAHSTAQNVITDWMPFRNAIQYLTKRSEATLSLGKSWGDK QHLVKEFCSSILDEAQKSTPHAYVYIKAEGCRSYWNWLGDSGVADFATHAKSKWSLLRIVRVRDQAPKLLQHKIVDGHDK PTTTPSLFKLHTTDLPVYWSLGEPIQQYTRGLSCYRTLTVSQANPKTKEKVVKTFSPDIKQAMRPNATEFTLISSLPEDE PDTISQFSASLRRGLMPARLETWVKSPSPIFVMNKLEEYLKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 104309; Mature: 104177
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEKDIEQVNRQDQNIIQDLAMAFSPPVYPQVLNVQVTKAYWTPHAMALFADIYKLAEQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHH HFIKQGAKDKNVTLPTSALRNLLHGSLPNLLSTNQYLGLGPHSLYRKDISLCGLFKQNIH HHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH TVERFYACLDEWIEHDMTGFIERYDIPDHFREEMYGLADNTSLVTFTDDSLCLYPWISPH HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCEEEECCCCCC VDTAPSLGERLTISANDIAVLLEGEVIFPELPPVRRVAGHGGNRAELVTLPINDHQEGRF CCCCCCCCCEEEEECCCEEEEEECCEECCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCE SLVCEISVETLPTDNTPIININFKKRRWLESLNNDYTRALTKSGYLIESEGTRAYHFCLE EEEEEEEEEECCCCCCCEEEEECHHHHHHHHHCCHHHHHHHCCCCEEECCCCEEEEEEEE KNQTNNWKWTPDSAFSALERRFDLTFTEALMFQEPSDQSDFIGIVHDYENEGDQKNEIGA CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCC GVPEKDRKDAFDLISQILSKFGFTPFSAFERVKSPIKAFSNVTYMSKLVKDKPTDIKLEA CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE ADSLYLGQPLPPSLFEYDDIDALTAGTKVYLPDLIQGYLSDENVTKHVKSQTLFLVSQSA CCCEECCCCCCCCCCCCCCCHHHHCCCEEECHHHHHHHHCCCHHHHHHHHCEEEEEECCC AEGEVLKRIAYTLFGDCLTIKSVSLPELVHGPRVDLPSSEVKNKHTRKSARKKQWEGFVK CHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SLSEDSMSSICLIQAPMFYETSSGPKPDDEVNKPAAKLAFSSEQGFPVQYLLPPDTRSSS HHCHHHHCCEEEEECCCEEECCCCCCCCHHHCCCHHHHEECCCCCCCEEEEECCCCCCCH TTKLEKYIMQAQQALLDLIFGHLGKLPNLSKRTSHYHSDEKAPKYLYGINMFTATTETRA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEECEEEEECCCCCC SKAEIIVASRVCIESGLTEIKIAHSTAQNVITDWMPFRNAIQYLTKRSEATLSLGKSWGD CCHHEEHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC KQHLVKEFCSSILDEAQKSTPHAYVYIKAEGCRSYWNWLGDSGVADFATHAKSKWSLLRI HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VRVRDQAPKLLQHKIVDGHDKPTTTPSLFKLHTTDLPVYWSLGEPIQQYTRGLSCYRTLT HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEECCCHHHHHHHCCHHHHHEEE VSQANPKTKEKVVKTFSPDIKQAMRPNATEFTLISSLPEDEPDTISQFSASLRRGLMPAR ECCCCCHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHH LETWVKSPSPIFVMNKLEEYLKL HHHHHCCCCCEEHHHHHHHHHCC >Mature Secondary Structure STEKDIEQVNRQDQNIIQDLAMAFSPPVYPQVLNVQVTKAYWTPHAMALFADIYKLAEQ CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHH HFIKQGAKDKNVTLPTSALRNLLHGSLPNLLSTNQYLGLGPHSLYRKDISLCGLFKQNIH HHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH TVERFYACLDEWIEHDMTGFIERYDIPDHFREEMYGLADNTSLVTFTDDSLCLYPWISPH HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCEEEECCCCCC VDTAPSLGERLTISANDIAVLLEGEVIFPELPPVRRVAGHGGNRAELVTLPINDHQEGRF CCCCCCCCCEEEEECCCEEEEEECCEECCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCE SLVCEISVETLPTDNTPIININFKKRRWLESLNNDYTRALTKSGYLIESEGTRAYHFCLE EEEEEEEEEECCCCCCCEEEEECHHHHHHHHHCCHHHHHHHCCCCEEECCCCEEEEEEEE KNQTNNWKWTPDSAFSALERRFDLTFTEALMFQEPSDQSDFIGIVHDYENEGDQKNEIGA CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCC GVPEKDRKDAFDLISQILSKFGFTPFSAFERVKSPIKAFSNVTYMSKLVKDKPTDIKLEA CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE ADSLYLGQPLPPSLFEYDDIDALTAGTKVYLPDLIQGYLSDENVTKHVKSQTLFLVSQSA CCCEECCCCCCCCCCCCCCCHHHHCCCEEECHHHHHHHHCCCHHHHHHHHCEEEEEECCC AEGEVLKRIAYTLFGDCLTIKSVSLPELVHGPRVDLPSSEVKNKHTRKSARKKQWEGFVK CHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SLSEDSMSSICLIQAPMFYETSSGPKPDDEVNKPAAKLAFSSEQGFPVQYLLPPDTRSSS HHCHHHHCCEEEEECCCEEECCCCCCCCHHHCCCHHHHEECCCCCCCEEEEECCCCCCCH TTKLEKYIMQAQQALLDLIFGHLGKLPNLSKRTSHYHSDEKAPKYLYGINMFTATTETRA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEECEEEEECCCCCC SKAEIIVASRVCIESGLTEIKIAHSTAQNVITDWMPFRNAIQYLTKRSEATLSLGKSWGD CCHHEEHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC KQHLVKEFCSSILDEAQKSTPHAYVYIKAEGCRSYWNWLGDSGVADFATHAKSKWSLLRI HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VRVRDQAPKLLQHKIVDGHDKPTTTPSLFKLHTTDLPVYWSLGEPIQQYTRGLSCYRTLT HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEECCCHHHHHHHCCHHHHHEEE VSQANPKTKEKVVKTFSPDIKQAMRPNATEFTLISSLPEDEPDTISQFSASLRRGLMPAR ECCCCCHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHH LETWVKSPSPIFVMNKLEEYLKL HHHHHCCCCCEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA