| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920621
Identifier: 117920621
GI number: 117920621
Start: 2610605
End: 2612809
Strand: Direct
Name: 117920621
Synonym: Shewana3_2177
Alternate gene names: NA
Gene position: 2610605-2612809 (Clockwise)
Preceding gene: 117920620
Following gene: 117920622
Centisome position: 52.5
GC content: 45.76
Gene sequence:
>2205_bases ATGGCGGTGACATTCACCGACAGTGACAGTAGAACCATCAATATTCTCTTTTGCAATCTGAATAAAAACTTTCCAAATAT AGGTACGCGTTTCACAGACGATGACCGATTAGCGCCTGAAACACATGATTTATTGTTTGCCTATATGCTTGATGTATTGA AGGAAAACATAACCATAAATAGAAGGCAAGATAAAATCACGACAGCAAGATACTTCCTTTGCCGCTTGAATGAGAATGTC GCCTCTGCTTCCCTTGATAAAATTCAACACGTCATCGACTCGCTGAAATACTCTCGCCCCCTAACGAATTTCATCAACTG GCTACACCATCATAAAATGTTGCCCAAAAGCTGTCAGCCCTACATAAATACCACCACTGAAGCAGCTCGAAATAAAAGTG GTGATGATGCACTGGCGGCGGAGAAAGGCAAACTGCCTTCGGAAAAATCGCTGTTAGCGCTCGGCGCTATCTTTCATGAT GTCATCCCCCCCTATCTGGATGATGACCAAAATGATATTGATGCTTGGCAACCGCTTATCGCATCGACGCAAACGCAGCG AGACAGCTTTATTTGCACCATGGCAGCGCTAGGCATGGCGTCACCTAATCGCATCGGTGCAGAGCAAGTGCTTCTGACTA CACAACGCATACAGCGCCATTCGCAAGTTGTCGATGGACAAGAAAAAACAGTGCATTATCTGAACTGGCGAGGCTCAAAG GGCTTTAAGGACAATCAAAATCACATCAATGCCGAAATGGTTGAGAGTCTAGACCGAGCCTTGCACTTCACCATCCTAGC GACAGAACCTGCCAGAGCCCTGGCTCGGTTCTATCGACAGCCAAATCGCCCATTGAAAGAAGTGCTGGGTGATTTTAAGC CTAGCGATGAGAACATTGCCCTGCTAAAGCCATCCATGAACAAACCCACCCACCTTTTGCATCTTGGCTTGCTGCTAGGC TTTTTTGAAGGCAGTGACAAATGTGTGCGAGTTACCCCTGACACAAAAGGGGCAATCGACAAAACTTATAAACCGCATAA TCCAAAGTTCATCAAACCCATTGCCCAACTTGAGCCGTTCGATACATTGGTATTTAAGCCTCGCTGCCCTTACGCTCGGG CGCTAACAGGATCTAATTTTGCAAAGCAATGTCAATACCAAAATTATACTGCGGGTCAACAAGCACTTACCGTGGCCGCC TTTCAAAATCACACCATCGAGATAAATCAATCTCAACTGAGTGGCTACAATAAGCAGCAAACGAAGTCTGTAGATGTAGA GCACGCCTTGTTTATGTATACAGAAAAGCAAATGGGCGGCAAGGTAACACACCCTTTTCTTTTGGTGCCGATTGGCTCGC TCAGTCGGATCTTTGCTGACGATTTAAGTAAAGCCAGTAAAAACAGGCTGACGATTTTTGAGCGACACGGCTTTGCCAGC GATTTTGTGCTCAAGCCTCACCAACTTCGCCACTGGCAAAATGATTACCTTGCGAAAAAAGGGCTACCTCACCATCTCAT CACCCTGCTGTCCGGTCGAAAAAGCGCAGAGCAAACCCTGACGTATATCCATACCACAGATGCCGAGAACGCCTCGGTGA TTTGGGATATCTCTTACTCTAATGAGCCAGAAAGGGACGTTAAAGAGAAAGTCAGTCTTCGTATTAGAACCATGAACCAA TACAATGAGGCTATCGACAATGAAACGCCTACTTTTGTCCATGAAACAGGGTTTTGCACTCAGAACCTCGCCCTATCACC TTGCACTTACATGTCAGAGTTTGAAACACAATGTGCGCTGTGCTCATCGTCGTGCCATATCGCCCATGATAGTGAGGCAA TTGCCTTGCTTATGAAGGATCTAAAAGTACAGACGCATAACTTGGAAAAGGTTCAGACTACCATCAACTTTGTCACCAGT CGAAGCATGCAGATGTGGTACAAAACCCATTATCGCAACACGTGCATGCTAAAGCACCTCATTGAAGTGCTATCCGATGA CGCCATCGAAAAAGGCAGTATGGTACGTTTACTTACTCGTTCAAATAGCATAAGAATCACCAGTTTAGAGACAAAAACAG TGGCAGAACACAAGTTAGCGCTACCTGATGCCGAGCAAGCCCTTCAAGCCGCGCTTGAGGCAAAAAAAGCTAAAAGCCAA GATGCAGCCACGAATAATTTCTTAGGCTTTCTAGGTTCACTCTAG
Upstream 100 bases:
>100_bases TCGCTACATTGATAACCAGTGTGCTTACGTGGCCAAAAAGAAAACTCAGCCATTAATGGGCTTTACTAACTCTCAGGGGG AGCCTGCGTCATGGGATGAT
Downstream 100 bases:
>100_bases GGAGGCAATATGGCACTTAAATCACTCGAAACTGAACAGCAAATTTCCATACAAGCCCTCATTCGAAGCTGGGAAGGAAA ATTAACCTGGGACTTGTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 734; Mature: 733
Protein sequence:
>734_residues MAVTFTDSDSRTINILFCNLNKNFPNIGTRFTDDDRLAPETHDLLFAYMLDVLKENITINRRQDKITTARYFLCRLNENV ASASLDKIQHVIDSLKYSRPLTNFINWLHHHKMLPKSCQPYINTTTEAARNKSGDDALAAEKGKLPSEKSLLALGAIFHD VIPPYLDDDQNDIDAWQPLIASTQTQRDSFICTMAALGMASPNRIGAEQVLLTTQRIQRHSQVVDGQEKTVHYLNWRGSK GFKDNQNHINAEMVESLDRALHFTILATEPARALARFYRQPNRPLKEVLGDFKPSDENIALLKPSMNKPTHLLHLGLLLG FFEGSDKCVRVTPDTKGAIDKTYKPHNPKFIKPIAQLEPFDTLVFKPRCPYARALTGSNFAKQCQYQNYTAGQQALTVAA FQNHTIEINQSQLSGYNKQQTKSVDVEHALFMYTEKQMGGKVTHPFLLVPIGSLSRIFADDLSKASKNRLTIFERHGFAS DFVLKPHQLRHWQNDYLAKKGLPHHLITLLSGRKSAEQTLTYIHTTDAENASVIWDISYSNEPERDVKEKVSLRIRTMNQ YNEAIDNETPTFVHETGFCTQNLALSPCTYMSEFETQCALCSSSCHIAHDSEAIALLMKDLKVQTHNLEKVQTTINFVTS RSMQMWYKTHYRNTCMLKHLIEVLSDDAIEKGSMVRLLTRSNSIRITSLETKTVAEHKLALPDAEQALQAALEAKKAKSQ DAATNNFLGFLGSL
Sequences:
>Translated_734_residues MAVTFTDSDSRTINILFCNLNKNFPNIGTRFTDDDRLAPETHDLLFAYMLDVLKENITINRRQDKITTARYFLCRLNENV ASASLDKIQHVIDSLKYSRPLTNFINWLHHHKMLPKSCQPYINTTTEAARNKSGDDALAAEKGKLPSEKSLLALGAIFHD VIPPYLDDDQNDIDAWQPLIASTQTQRDSFICTMAALGMASPNRIGAEQVLLTTQRIQRHSQVVDGQEKTVHYLNWRGSK GFKDNQNHINAEMVESLDRALHFTILATEPARALARFYRQPNRPLKEVLGDFKPSDENIALLKPSMNKPTHLLHLGLLLG FFEGSDKCVRVTPDTKGAIDKTYKPHNPKFIKPIAQLEPFDTLVFKPRCPYARALTGSNFAKQCQYQNYTAGQQALTVAA FQNHTIEINQSQLSGYNKQQTKSVDVEHALFMYTEKQMGGKVTHPFLLVPIGSLSRIFADDLSKASKNRLTIFERHGFAS DFVLKPHQLRHWQNDYLAKKGLPHHLITLLSGRKSAEQTLTYIHTTDAENASVIWDISYSNEPERDVKEKVSLRIRTMNQ YNEAIDNETPTFVHETGFCTQNLALSPCTYMSEFETQCALCSSSCHIAHDSEAIALLMKDLKVQTHNLEKVQTTINFVTS RSMQMWYKTHYRNTCMLKHLIEVLSDDAIEKGSMVRLLTRSNSIRITSLETKTVAEHKLALPDAEQALQAALEAKKAKSQ DAATNNFLGFLGSL >Mature_733_residues AVTFTDSDSRTINILFCNLNKNFPNIGTRFTDDDRLAPETHDLLFAYMLDVLKENITINRRQDKITTARYFLCRLNENVA SASLDKIQHVIDSLKYSRPLTNFINWLHHHKMLPKSCQPYINTTTEAARNKSGDDALAAEKGKLPSEKSLLALGAIFHDV IPPYLDDDQNDIDAWQPLIASTQTQRDSFICTMAALGMASPNRIGAEQVLLTTQRIQRHSQVVDGQEKTVHYLNWRGSKG FKDNQNHINAEMVESLDRALHFTILATEPARALARFYRQPNRPLKEVLGDFKPSDENIALLKPSMNKPTHLLHLGLLLGF FEGSDKCVRVTPDTKGAIDKTYKPHNPKFIKPIAQLEPFDTLVFKPRCPYARALTGSNFAKQCQYQNYTAGQQALTVAAF QNHTIEINQSQLSGYNKQQTKSVDVEHALFMYTEKQMGGKVTHPFLLVPIGSLSRIFADDLSKASKNRLTIFERHGFASD FVLKPHQLRHWQNDYLAKKGLPHHLITLLSGRKSAEQTLTYIHTTDAENASVIWDISYSNEPERDVKEKVSLRIRTMNQY NEAIDNETPTFVHETGFCTQNLALSPCTYMSEFETQCALCSSSCHIAHDSEAIALLMKDLKVQTHNLEKVQTTINFVTSR SMQMWYKTHYRNTCMLKHLIEVLSDDAIEKGSMVRLLTRSNSIRITSLETKTVAEHKLALPDAEQALQAALEAKKAKSQD AATNNFLGFLGSL
Specific function: Unknown
COG id: COG4688
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83059; Mature: 82928
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTFTDSDSRTINILFCNLNKNFPNIGTRFTDDDRLAPETHDLLFAYMLDVLKENITIN CEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE RRQDKITTARYFLCRLNENVASASLDKIQHVIDSLKYSRPLTNFINWLHHHKMLPKSCQP CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC YINTTTEAARNKSGDDALAAEKGKLPSEKSLLALGAIFHDVIPPYLDDDQNDIDAWQPLI CCCCCHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH ASTQTQRDSFICTMAALGMASPNRIGAEQVLLTTQRIQRHSQVVDGQEKTVHYLNWRGSK HCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC GFKDNQNHINAEMVESLDRALHFTILATEPARALARFYRQPNRPLKEVLGDFKPSDENIA CCCCCCCCCCHHHHHHHHHHEEEEEEECCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEE LLKPSMNKPTHLLHLGLLLGFFEGSDKCVRVTPDTKGAIDKTYKPHNPKFIKPIAQLEPF EECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHCHHHHCCCC DTLVFKPRCPYARALTGSNFAKQCQYQNYTAGQQALTVAAFQNHTIEINQSQLSGYNKQQ HHEEECCCCCHHHHCCCCCHHHHHCCCCCCCCHHHEEEEEECCCEEEEEHHHHCCCCCHH TKSVDVEHALFMYTEKQMGGKVTHPFLLVPIGSLSRIFADDLSKASKNRLTIFERHGFAS CCCCCHHHHHEEEEHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCC DFVLKPHQLRHWQNDYLAKKGLPHHLITLLSGRKSAEQTLTYIHTTDAENASVIWDISYS CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHEEEEEEECCCCCCEEEEEECCC NEPERDVKEKVSLRIRTMNQYNEAIDNETPTFVHETGFCTQNLALSPCTYMSEFETQCAL CCCHHHHHHHHHEEEEEHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHH CSSSCHIAHDSEAIALLMKDLKVQTHNLEKVQTTINFVTSRSMQMWYKTHYRNTCMLKHL HCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IEVLSDDAIEKGSMVRLLTRSNSIRITSLETKTVAEHKLALPDAEQALQAALEAKKAKSQ HHHHCCCCCCCCCEEEEEECCCCEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC DAATNNFLGFLGSL CCHHHHHHHHHCCC >Mature Secondary Structure AVTFTDSDSRTINILFCNLNKNFPNIGTRFTDDDRLAPETHDLLFAYMLDVLKENITIN EEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE RRQDKITTARYFLCRLNENVASASLDKIQHVIDSLKYSRPLTNFINWLHHHKMLPKSCQP CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC YINTTTEAARNKSGDDALAAEKGKLPSEKSLLALGAIFHDVIPPYLDDDQNDIDAWQPLI CCCCCHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH ASTQTQRDSFICTMAALGMASPNRIGAEQVLLTTQRIQRHSQVVDGQEKTVHYLNWRGSK HCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC GFKDNQNHINAEMVESLDRALHFTILATEPARALARFYRQPNRPLKEVLGDFKPSDENIA CCCCCCCCCCHHHHHHHHHHEEEEEEECCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEE LLKPSMNKPTHLLHLGLLLGFFEGSDKCVRVTPDTKGAIDKTYKPHNPKFIKPIAQLEPF EECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHCHHHHCCCC DTLVFKPRCPYARALTGSNFAKQCQYQNYTAGQQALTVAAFQNHTIEINQSQLSGYNKQQ HHEEECCCCCHHHHCCCCCHHHHHCCCCCCCCHHHEEEEEECCCEEEEEHHHHCCCCCHH TKSVDVEHALFMYTEKQMGGKVTHPFLLVPIGSLSRIFADDLSKASKNRLTIFERHGFAS CCCCCHHHHHEEEEHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCC DFVLKPHQLRHWQNDYLAKKGLPHHLITLLSGRKSAEQTLTYIHTTDAENASVIWDISYS CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHEEEEEEECCCCCCEEEEEECCC NEPERDVKEKVSLRIRTMNQYNEAIDNETPTFVHETGFCTQNLALSPCTYMSEFETQCAL CCCHHHHHHHHHEEEEEHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHH CSSSCHIAHDSEAIALLMKDLKVQTHNLEKVQTTINFVTSRSMQMWYKTHYRNTCMLKHL HCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IEVLSDDAIEKGSMVRLLTRSNSIRITSLETKTVAEHKLALPDAEQALQAALEAKKAKSQ HHHHCCCCCCCCCEEEEEECCCCEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC DAATNNFLGFLGSL CCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA