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The map label for this gene is rnfG [H]

Identifier: 117920616

GI number: 117920616

Start: 2605396

End: 2606022

Strand: Direct

Name: rnfG [H]

Synonym: Shewana3_2172

Alternate gene names: 117920616

Gene position: 2605396-2606022 (Clockwise)

Preceding gene: 117920615

Following gene: 117920617

Centisome position: 52.4

GC content: 49.76

Gene sequence:

>627_bases
ATGATTAAAAATGGTCTGTTACTTGCGCTATTTGCCCTGCTCTGCACGGGCTTAGTCGCAGTGGTCAATCAACAGACCTT
AGACAAAATTAAGCAGCAGGAGCAGCAGGAATTGATGCGCGTACTGCATCAGCTGATCCCTGATGAGCTCCATGACAATG
AGCTAACCGCGCAATGCACCCTGTTGCAGGATAAAGAGGCGCTCGGCACCGAAGATGCCATGCCCGCCTATATTGCTACC
GCTGCTGGTAAACCCGTTGCTATCGCCCTAGAAGCCATTGCCCCCGATGGTTACAACGGCAATATTAAGCTGATTGTGGG
CATCAATACCCAAGGTGAAGTATTAGGCGTGCGCACACTCGCCCACCAAGAAACCCCAGGCCTTGGGGATAAAATCGATT
TACGTAAATCCGACTGGGTGACGCAATTCGTCGGTAAAGTGCTTAAATCAGAAGATGATAAGCAATGGCTAGTGCAAAAA
GACGGTGGTGATTTCGACCAATTTACCGGCGCGACAATCACACCACGCGCCTATGTGAAAGCGGTTAAGCGCGCCGTATG
GTACTTTACTCAGCATCAAGCAGAGATTTTCAGCCAACCTCTGAATTGTGAGGCCAACCATGACTAA

Upstream 100 bases:

>100_bases
TGCGTCCGCGCACCTATGGCCATTCAGCGCCCTAGGCCTGTGGCAAAAGAATCAAGCATGCTTGAACAAAGATTCTTGAG
GAATAAAAGTGAATAATCCA

Downstream 100 bases:

>100_bases
TTATCGCGAAATTGCCTGGCAAGGACTGTGGAAAAACAACCCTGGCTTAGTGCAATTACTGGGTCTGTGCCCCCTGTTAG
CCGTAACGGCCACCCTCACC

Product: electron transport complex protein RnfG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MIKNGLLLALFALLCTGLVAVVNQQTLDKIKQQEQQELMRVLHQLIPDELHDNELTAQCTLLQDKEALGTEDAMPAYIAT
AAGKPVAIALEAIAPDGYNGNIKLIVGINTQGEVLGVRTLAHQETPGLGDKIDLRKSDWVTQFVGKVLKSEDDKQWLVQK
DGGDFDQFTGATITPRAYVKAVKRAVWYFTQHQAEIFSQPLNCEANHD

Sequences:

>Translated_208_residues
MIKNGLLLALFALLCTGLVAVVNQQTLDKIKQQEQQELMRVLHQLIPDELHDNELTAQCTLLQDKEALGTEDAMPAYIAT
AAGKPVAIALEAIAPDGYNGNIKLIVGINTQGEVLGVRTLAHQETPGLGDKIDLRKSDWVTQFVGKVLKSEDDKQWLVQK
DGGDFDQFTGATITPRAYVKAVKRAVWYFTQHQAEIFSQPLNCEANHD
>Mature_208_residues
MIKNGLLLALFALLCTGLVAVVNQQTLDKIKQQEQQELMRVLHQLIPDELHDNELTAQCTLLQDKEALGTEDAMPAYIAT
AAGKPVAIALEAIAPDGYNGNIKLIVGINTQGEVLGVRTLAHQETPGLGDKIDLRKSDWVTQFVGKVLKSEDDKQWLVQK
DGGDFDQFTGATITPRAYVKAVKRAVWYFTQHQAEIFSQPLNCEANHD

Specific function: May be part of a membrane complex involved in electron transport [H]

COG id: COG4659

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfG

Gene ontology:

Cell location: Cell inner membrane (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rnfG family [H]

Homologues:

Organism=Escherichia coli, GI1787918, Length=202, Percent_Identity=50, Blast_Score=188, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022989
- InterPro:   IPR010209
- InterPro:   IPR007329 [H]

Pfam domain/function: PF04205 FMN_bind [H]

EC number: NA

Molecular weight: Translated: 22951; Mature: 22951

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKNGLLLALFALLCTGLVAVVNQQTLDKIKQQEQQELMRVLHQLIPDELHDNELTAQCT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEEEEE
LLQDKEALGTEDAMPAYIATAAGKPVAIALEAIAPDGYNGNIKLIVGINTQGEVLGVRTL
EECCHHHCCCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCEEEHHHH
AHQETPGLGDKIDLRKSDWVTQFVGKVLKSEDDKQWLVQKDGGDFDQFTGATITPRAYVK
HHCCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHCCCCCCCHHHHHH
AVKRAVWYFTQHQAEIFSQPLNCEANHD
HHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIKNGLLLALFALLCTGLVAVVNQQTLDKIKQQEQQELMRVLHQLIPDELHDNELTAQCT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEEEEE
LLQDKEALGTEDAMPAYIATAAGKPVAIALEAIAPDGYNGNIKLIVGINTQGEVLGVRTL
EECCHHHCCCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCEEEHHHH
AHQETPGLGDKIDLRKSDWVTQFVGKVLKSEDDKQWLVQKDGGDFDQFTGATITPRAYVK
HHCCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHCCCCCCCHHHHHH
AVKRAVWYFTQHQAEIFSQPLNCEANHD
HHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA