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The map label for this gene is cbbGC [H]

Identifier: 117920568

GI number: 117920568

Start: 2549430

End: 2550440

Strand: Direct

Name: cbbGC [H]

Synonym: Shewana3_2124

Alternate gene names: 117920568

Gene position: 2549430-2550440 (Clockwise)

Preceding gene: 117920567

Following gene: 117920577

Centisome position: 51.27

GC content: 45.3

Gene sequence:

>1011_bases
ATGACTATCCGTGTAGCAATAAATGGTTATGGCCGTATCGGTAGAAACGTATTACGCGCCCTGTATGAAAGCGAAAAAGC
TTACCCAATCAAAATTGTTGCCATCAACGATTTAGGCGACGCTTCAATCAACGCTCACCTGACAAAATACGATTCTGTAC
ATGGTCGTTTCAATGCCAAAGTTGAGCATGATGCTGAAGCAATTTATGTCAACGGCGACAAGATCCTCACCTTCCAAGAA
CGCGATCCAGGTAAATTACCTTGGGGCGACTTACAAGTTGACGTCGTGTTCGAATGTACTGGTATCTTCACTTCTAAAGA
ATCTGTACAGCCACATTTAGCGGCGGGCGCGAAGAAAGTCATTATTTCTGCACCAGGTAAAAACGTTGATGCAACCGTCG
TTTACGGTGTGAACAACAATGTATTGACCGCGGATATGACAGTTATCTCTAATGCTTCATGTACCACTAACTGTTTAGCA
CCTTTCGCTAAGCCGTTAAATGACGAAATTGGTATTGAATCCGGTCTGATGACCACCATTCATGCTTACACCAACGATCA
ACGTTTATCTGACGTATACCACACAGATTTACGTCGTGCCCGCGCTGCAGCACTGTCAATGATCCCAACTAAAACTGGCG
CTGCCGCGGCAGTAGGTTTAGTTGTACCTGAATTACAAGGTAAATTCGATGGTTTAGCAGTACGTGTACCGACTGTTAAC
GTGTCTTTAGTGGATTTATCTTTCATTGCAGCACGTGATACCACTGTTGAAGAAGTTAACGCCATCATCGAACGTGCCGC
TGCTGTTGCGCCTCTGAGCGAAGTGTTAGCGGTTAACAAAGAGCCACTGGTGTCTATCGACTTTAACCACAATGCGTTTT
CATCTAACTTCGATGCGACTCAAACCCGCGTTAACGGCCGTTTAGTTAAAGTGATGGCATGGTACGATAACGAATGGGGC
TTCAGTAACCGTATGTTGGACAACGCGGTTGCGCTGATGAACGCGAAGTAA

Upstream 100 bases:

>100_bases
TAACCGAATCCCGGCAAAATTGCCGAATTCACTTGACGATAGCTGTCAGTTTGGTAATTTTACTACCAGTTGAATTTTAT
AATCACCAGAGGGATATGAG

Downstream 100 bases:

>100_bases
TCATTCTTCTTTATCAAAAAGCCCCGCTCTTGCGGGGCTTTTTTTATACCGATTTCACGGCTCATTAATCCACTGTCGTT
ACCAATGCTCGCATTTCGCC

Product: glyceraldehyde-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MTIRVAINGYGRIGRNVLRALYESEKAYPIKIVAINDLGDASINAHLTKYDSVHGRFNAKVEHDAEAIYVNGDKILTFQE
RDPGKLPWGDLQVDVVFECTGIFTSKESVQPHLAAGAKKVIISAPGKNVDATVVYGVNNNVLTADMTVISNASCTTNCLA
PFAKPLNDEIGIESGLMTTIHAYTNDQRLSDVYHTDLRRARAAALSMIPTKTGAAAAVGLVVPELQGKFDGLAVRVPTVN
VSLVDLSFIAARDTTVEEVNAIIERAAAVAPLSEVLAVNKEPLVSIDFNHNAFSSNFDATQTRVNGRLVKVMAWYDNEWG
FSNRMLDNAVALMNAK

Sequences:

>Translated_336_residues
MTIRVAINGYGRIGRNVLRALYESEKAYPIKIVAINDLGDASINAHLTKYDSVHGRFNAKVEHDAEAIYVNGDKILTFQE
RDPGKLPWGDLQVDVVFECTGIFTSKESVQPHLAAGAKKVIISAPGKNVDATVVYGVNNNVLTADMTVISNASCTTNCLA
PFAKPLNDEIGIESGLMTTIHAYTNDQRLSDVYHTDLRRARAAALSMIPTKTGAAAAVGLVVPELQGKFDGLAVRVPTVN
VSLVDLSFIAARDTTVEEVNAIIERAAAVAPLSEVLAVNKEPLVSIDFNHNAFSSNFDATQTRVNGRLVKVMAWYDNEWG
FSNRMLDNAVALMNAK
>Mature_335_residues
TIRVAINGYGRIGRNVLRALYESEKAYPIKIVAINDLGDASINAHLTKYDSVHGRFNAKVEHDAEAIYVNGDKILTFQER
DPGKLPWGDLQVDVVFECTGIFTSKESVQPHLAAGAKKVIISAPGKNVDATVVYGVNNNVLTADMTVISNASCTTNCLAP
FAKPLNDEIGIESGLMTTIHAYTNDQRLSDVYHTDLRRARAAALSMIPTKTGAAAAVGLVVPELQGKFDGLAVRVPTVNV
SLVDLSFIAARDTTVEEVNAIIERAAAVAPLSEVLAVNKEPLVSIDFNHNAFSSNFDATQTRVNGRLVKVMAWYDNEWGF
SNRMLDNAVALMNAK

Specific function: Could Play A Role In Pyridoxal 5'-Phosphate Synthesis. [C]

COG id: COG0057

COG function: function code G; Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI7669492, Length=329, Percent_Identity=45.5927051671732, Blast_Score=278, Evalue=5e-75,
Organism=Homo sapiens, GI7657116, Length=329, Percent_Identity=41.6413373860182, Blast_Score=246, Evalue=3e-65,
Organism=Escherichia coli, GI1789295, Length=334, Percent_Identity=51.1976047904192, Blast_Score=350, Evalue=1e-97,
Organism=Escherichia coli, GI1788079, Length=329, Percent_Identity=48.6322188449848, Blast_Score=291, Evalue=3e-80,
Organism=Caenorhabditis elegans, GI17534677, Length=332, Percent_Identity=45.4819277108434, Blast_Score=266, Evalue=2e-71,
Organism=Caenorhabditis elegans, GI17534679, Length=332, Percent_Identity=45.4819277108434, Blast_Score=265, Evalue=3e-71,
Organism=Caenorhabditis elegans, GI32566163, Length=332, Percent_Identity=45.1807228915663, Blast_Score=258, Evalue=3e-69,
Organism=Caenorhabditis elegans, GI17568413, Length=332, Percent_Identity=45.1807228915663, Blast_Score=258, Evalue=4e-69,
Organism=Saccharomyces cerevisiae, GI6322468, Length=328, Percent_Identity=47.2560975609756, Blast_Score=302, Evalue=5e-83,
Organism=Saccharomyces cerevisiae, GI6322409, Length=328, Percent_Identity=47.2560975609756, Blast_Score=302, Evalue=6e-83,
Organism=Saccharomyces cerevisiae, GI6321631, Length=328, Percent_Identity=47.2560975609756, Blast_Score=299, Evalue=3e-82,
Organism=Drosophila melanogaster, GI85725000, Length=328, Percent_Identity=46.6463414634146, Blast_Score=272, Evalue=2e-73,
Organism=Drosophila melanogaster, GI22023983, Length=328, Percent_Identity=46.6463414634146, Blast_Score=272, Evalue=2e-73,
Organism=Drosophila melanogaster, GI17933600, Length=328, Percent_Identity=46.0365853658537, Blast_Score=268, Evalue=3e-72,
Organism=Drosophila melanogaster, GI18110149, Length=328, Percent_Identity=46.0365853658537, Blast_Score=268, Evalue=3e-72,
Organism=Drosophila melanogaster, GI19922412, Length=328, Percent_Identity=45.1219512195122, Blast_Score=258, Evalue=3e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020831
- InterPro:   IPR020830
- InterPro:   IPR020829
- InterPro:   IPR020828
- InterPro:   IPR006424
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02800 Gp_dh_C; PF00044 Gp_dh_N [H]

EC number: =1.2.1.12 [H]

Molecular weight: Translated: 36376; Mature: 36245

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS00071 GAPDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRVAINGYGRIGRNVLRALYESEKAYPIKIVAINDLGDASINAHLTKYDSVHGRFNAK
CEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCEEECE
VEHDAEAIYVNGDKILTFQERDPGKLPWGDLQVDVVFECTGIFTSKESVQPHLAAGAKKV
EECCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCHHHCCCEEE
IISAPGKNVDATVVYGVNNNVLTADMTVISNASCTTNCLAPFAKPLNDEIGIESGLMTTI
EEECCCCCCCEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEE
HAYTNDQRLSDVYHTDLRRARAAALSMIPTKTGAAAAVGLVVPELQGKFDGLAVRVPTVN
EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEE
VSLVDLSFIAARDTTVEEVNAIIERAAAVAPLSEVLAVNKEPLVSIDFNHNAFSSNFDAT
EEEEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEECCCCCCCCCCCCH
QTRVNGRLVKVMAWYDNEWGFSNRMLDNAVALMNAK
HEECCCEEEEEEEEECCCCCCCHHHHHHEEEEEECC
>Mature Secondary Structure 
TIRVAINGYGRIGRNVLRALYESEKAYPIKIVAINDLGDASINAHLTKYDSVHGRFNAK
EEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCEEECE
VEHDAEAIYVNGDKILTFQERDPGKLPWGDLQVDVVFECTGIFTSKESVQPHLAAGAKKV
EECCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCHHHCCCEEE
IISAPGKNVDATVVYGVNNNVLTADMTVISNASCTTNCLAPFAKPLNDEIGIESGLMTTI
EEECCCCCCCEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEE
HAYTNDQRLSDVYHTDLRRARAAALSMIPTKTGAAAAVGLVVPELQGKFDGLAVRVPTVN
EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEE
VSLVDLSFIAARDTTVEEVNAIIERAAAVAPLSEVLAVNKEPLVSIDFNHNAFSSNFDAT
EEEEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEECCCCCCCCCCCCH
QTRVNGRLVKVMAWYDNEWGFSNRMLDNAVALMNAK
HEECCCEEEEEEEEECCCCCCCHHHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7763137 [H]