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The map label for this gene is ybhK [C]

Identifier: 117920564

GI number: 117920564

Start: 2543481

End: 2544404

Strand: Direct

Name: ybhK [C]

Synonym: Shewana3_2120

Alternate gene names: 117920564

Gene position: 2543481-2544404 (Clockwise)

Preceding gene: 117920561

Following gene: 117920567

Centisome position: 51.15

GC content: 49.46

Gene sequence:

>924_bases
ATGCAGCATCAAATCTTAAATCAATACAGACACGTGGTCGCCATTGGCGGTGGTCACGGCTTGGGTCGAGTACTCTCATC
GCTGGATTTTCTGGGCAATCGTCTCACAGGCATTGTTGCAACCACAGATAATGGTGGCTCTACGGGCAGATTACGGGCCG
AACAGGACTGTATTGCCTGGGGCGATCTGCGTAATTGTCTGTCTCAACTAGCCCATCGCCCATCGGTGAGCTCGCAATTA
TTTGAGTACCGCTTTCAGGGCGAAACCGAACTAAGCGGCCACAATCTAGGGAATTTGATGCTGCTTGCCCTCGATAAGCT
TTGCGTTAGGCCCCTCGAGGCCGTCAATCTTATACGTCATATGCTTAAGATTGAAACCAATATCATCCCTATGTCAGAAC
AACCAACCCATTTAGTGGCATTGCAGGCCTCTGGTTGTAAGGTCTTTGGTGAGGTTAATGTCGATAAGATGAATGAGGCG
CCAATTGCCTTATGTCTTGAACCACAGGTCGATGCAACTGCCGAAGCCTGTGAGGCCATCAGCCGTGCGGATCTGATTAT
CCTAGGCCCAGGGAGCTTCCTGACCAGTATTATGCCACCGCTGTTACTGCCCTGCTTTGCTAAAGCCTTAGCGATGACCA
CTGCGCCCGTGGTTTTTATCGATAATCTGAATGAAGAAACTTCACCAGCTGGCCAGTTTAGTATTGAGCAGCGGATAGCT
TGGTGCCATCAAGTGATTGGCAAGCCTGTGATCACTAAAGTGCTACGTCACTCAGAACAAGTGCGCCTTGGCACTTTAAT
GAATTACTTCCCGTTAAGGAATCGCCACAATCCGCAATTACACGATCAGGCAGGGCTGCGTGATGCGCTCAGTGCAGTAT
TGAGAATTAAGTCGGATTTACCGCTAGAAACCTTGGCGTCATAA

Upstream 100 bases:

>100_bases
GTTCCGTTAACGCAGGTATTGGCAACTGAGCCCAAACGAGGCTTCGCAACACCGCTTAACAACAGGACAGGATTTTTTGG
GTATTCAGGAAGGAACCCTC

Downstream 100 bases:

>100_bases
CGACAGACTAACCGCATCCTTTAGCATCCAACAGATTCAAAATGCTAAAGGACAGCTCAAAATACAAAAAGGACAGCCTA
GGCTGTCCTTTTTAGTGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MQHQILNQYRHVVAIGGGHGLGRVLSSLDFLGNRLTGIVATTDNGGSTGRLRAEQDCIAWGDLRNCLSQLAHRPSVSSQL
FEYRFQGETELSGHNLGNLMLLALDKLCVRPLEAVNLIRHMLKIETNIIPMSEQPTHLVALQASGCKVFGEVNVDKMNEA
PIALCLEPQVDATAEACEAISRADLIILGPGSFLTSIMPPLLLPCFAKALAMTTAPVVFIDNLNEETSPAGQFSIEQRIA
WCHQVIGKPVITKVLRHSEQVRLGTLMNYFPLRNRHNPQLHDQAGLRDALSAVLRIKSDLPLETLAS

Sequences:

>Translated_307_residues
MQHQILNQYRHVVAIGGGHGLGRVLSSLDFLGNRLTGIVATTDNGGSTGRLRAEQDCIAWGDLRNCLSQLAHRPSVSSQL
FEYRFQGETELSGHNLGNLMLLALDKLCVRPLEAVNLIRHMLKIETNIIPMSEQPTHLVALQASGCKVFGEVNVDKMNEA
PIALCLEPQVDATAEACEAISRADLIILGPGSFLTSIMPPLLLPCFAKALAMTTAPVVFIDNLNEETSPAGQFSIEQRIA
WCHQVIGKPVITKVLRHSEQVRLGTLMNYFPLRNRHNPQLHDQAGLRDALSAVLRIKSDLPLETLAS
>Mature_307_residues
MQHQILNQYRHVVAIGGGHGLGRVLSSLDFLGNRLTGIVATTDNGGSTGRLRAEQDCIAWGDLRNCLSQLAHRPSVSSQL
FEYRFQGETELSGHNLGNLMLLALDKLCVRPLEAVNLIRHMLKIETNIIPMSEQPTHLVALQASGCKVFGEVNVDKMNEA
PIALCLEPQVDATAEACEAISRADLIILGPGSFLTSIMPPLLLPCFAKALAMTTAPVVFIDNLNEETSPAGQFSIEQRIA
WCHQVIGKPVITKVLRHSEQVRLGTLMNYFPLRNRHNPQLHDQAGLRDALSAVLRIKSDLPLETLAS

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=256, Percent_Identity=58.984375, Blast_Score=271, Evalue=5e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 33603; Mature: 33603

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHQILNQYRHVVAIGGGHGLGRVLSSLDFLGNRLTGIVATTDNGGSTGRLRAEQDCIAW
CCCHHHHHCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEECCHHHHHH
GDLRNCLSQLAHRPSVSSQLFEYRFQGETELSGHNLGNLMLLALDKLCVRPLEAVNLIRH
HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHH
MLKIETNIIPMSEQPTHLVALQASGCKVFGEVNVDKMNEAPIALCLEPQVDATAEACEAI
HHHHHCCEECCCCCCCEEEEEECCCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHH
SRADLIILGPGSFLTSIMPPLLLPCFAKALAMTTAPVVFIDNLNEETSPAGQFSIEQRIA
HHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHH
WCHQVIGKPVITKVLRHSEQVRLGTLMNYFPLRNRHNPQLHDQAGLRDALSAVLRIKSDL
HHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHCCC
PLETLAS
CHHHHCC
>Mature Secondary Structure
MQHQILNQYRHVVAIGGGHGLGRVLSSLDFLGNRLTGIVATTDNGGSTGRLRAEQDCIAW
CCCHHHHHCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEECCHHHHHH
GDLRNCLSQLAHRPSVSSQLFEYRFQGETELSGHNLGNLMLLALDKLCVRPLEAVNLIRH
HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHH
MLKIETNIIPMSEQPTHLVALQASGCKVFGEVNVDKMNEAPIALCLEPQVDATAEACEAI
HHHHHCCEECCCCCCCEEEEEECCCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHH
SRADLIILGPGSFLTSIMPPLLLPCFAKALAMTTAPVVFIDNLNEETSPAGQFSIEQRIA
HHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHH
WCHQVIGKPVITKVLRHSEQVRLGTLMNYFPLRNRHNPQLHDQAGLRDALSAVLRIKSDL
HHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHCCC
PLETLAS
CHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]