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The map label for this gene is fixN [H]

Identifier: 117920551

GI number: 117920551

Start: 2531582

End: 2533018

Strand: Direct

Name: fixN [H]

Synonym: Shewana3_2107

Alternate gene names: 117920551

Gene position: 2531582-2533018 (Clockwise)

Preceding gene: 117920549

Following gene: 117920552

Centisome position: 50.91

GC content: 46.83

Gene sequence:

>1437_bases
ATGATGAACCATTCCCAGCCAACAGGCGCTGATTACAATTACACCATTGTCCGCCAATTTGCCTTAACCACAGTTTTGTG
GGGTATTGTTGGTATGTCAGTCGGTGTATTAATTGCGGCTCAGTTAATCTGGCCACATCTGAACTTTGATACTCCTTGGT
TTACGTATAGTCGCTTGCGACCATTACATACCAATGCGGTTATCTTCGCGTTCGGAACATCAGCCCTCTTTGCAACATCC
TATTATGTCGTACAACGCACCTGTCAAACCCGACTATTTGCACCTAAATTAGCTGCATTTACGTTTTGGGGATGGCAAGC
CATCATTCTGTCAGCAGCAATCACTCTGCCAATGGGTTACACCAGTGGTAAAGAATATGCTGAATTAGAATGGCCAATCG
ATATCGCCATCACCATCGTTTGGGTCTCCTATGCAATAGTGTTCTTCGGCACTATTATCAAACGAACAACATCGCATATT
TACGTAGCGAACTGGTTCTTTGGTGCATTTATCATTACGGTTGCCGTGCTTCACATCGTGAACTCTATGGCCGTTCCTGT
TAGCTTGTTCAAGTCATACTCTATGTACAGTGGCGCGGTCGATGCCATGGTGCAATGGTGGTATGGTCACAACGCGGTAG
GCTTCCTGTTAACCGCAGGCTTCTTAGGTATGATGTACTACTTCGTTCCTAAGCAAGCGGGTCGTCCTGTTTACTCATAT
CGTCTGTCTATCGTGCACTTCTGGGCACTGATCGCACTGTACATTTGGGCAGGTCCTCACCACTTACACTACACTGCCCT
GCCAGACTGGACTCAGTCGTTAGGTATGGTGATGTCACTGATCCTGTTCGCACCATCTTGGGGTGGTATGATCAACGGTA
TCATGACCTTATCTGGTGCATGGCACAAACTGCGTACTGACCCAGTACTGCGTTTCTTAGTGGTTTCGCTGTCTTTCTAC
GGTATGTCGACCTTCGAAGGTCCGATGATGGCCATTAAGACAGTTAACGCTTTATCTCACTACACAGACTGGACTGTAGG
TCACGTTCACTCAGGCGCGCTAGGCTGGGTGGCAATGGTGTCTATCGGTTCTCTGTATCACTTGATCCCAGTACTATTCG
GCCATGGCCGTATGTACAGCATCAAGTTAGTTAACGTGCATTTCTGGTTAGCAACTATCGGTACTGTTCTTTACATCGTG
TCTATGTGGATTTCGGGTGTAATGCAGGGTCTGATGTGGCGTGCAGTTAACGCTGACGGTACTTTGACTTATAGCTTTGT
TGAAAGTCTGGAAGCTTCTTATCCTTTCTACTTCGTACGTTTCCTCGGCGGTTGTTTCTTCTTAACCGGTATGCTGATCA
TGGCATACAACGTGATCCGTACTGTGAAAGCCTCTAAAGATTCATTGCCAGCACTGGCTGAAGCAAAAGCGGCTTAA

Upstream 100 bases:

>100_bases
CATGGCTTCACAACCCTAATAGGGAAGTGGGCTTTGTGTCATATATAACAGGTAAAGCTTGTCTTTACTAAAAGTAAAAG
TAATAAGCAGTGGAAGCATT

Downstream 100 bases:

>100_bases
GGAGCAAACTCGATGAAATTTAATCATGAGATAGTTGAAAAAAACATCGGTTTGTTAGCGATCTTCACTGTTATCGCTAT
CAGCTTCGGTAGCTTGGTAG

Product: cbb3-type cytochrome c oxidase subunit I

Products: NA

Alternate protein names: Cytochrome CBB3 subunit 1; Cytochrome c oxidase polypeptide I homolog; Heme B/copper cytochrome c oxidase subunit [H]

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MMNHSQPTGADYNYTIVRQFALTTVLWGIVGMSVGVLIAAQLIWPHLNFDTPWFTYSRLRPLHTNAVIFAFGTSALFATS
YYVVQRTCQTRLFAPKLAAFTFWGWQAIILSAAITLPMGYTSGKEYAELEWPIDIAITIVWVSYAIVFFGTIIKRTTSHI
YVANWFFGAFIITVAVLHIVNSMAVPVSLFKSYSMYSGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAGRPVYSY
RLSIVHFWALIALYIWAGPHHLHYTALPDWTQSLGMVMSLILFAPSWGGMINGIMTLSGAWHKLRTDPVLRFLVVSLSFY
GMSTFEGPMMAIKTVNALSHYTDWTVGHVHSGALGWVAMVSIGSLYHLIPVLFGHGRMYSIKLVNVHFWLATIGTVLYIV
SMWISGVMQGLMWRAVNADGTLTYSFVESLEASYPFYFVRFLGGCFFLTGMLIMAYNVIRTVKASKDSLPALAEAKAA

Sequences:

>Translated_478_residues
MMNHSQPTGADYNYTIVRQFALTTVLWGIVGMSVGVLIAAQLIWPHLNFDTPWFTYSRLRPLHTNAVIFAFGTSALFATS
YYVVQRTCQTRLFAPKLAAFTFWGWQAIILSAAITLPMGYTSGKEYAELEWPIDIAITIVWVSYAIVFFGTIIKRTTSHI
YVANWFFGAFIITVAVLHIVNSMAVPVSLFKSYSMYSGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAGRPVYSY
RLSIVHFWALIALYIWAGPHHLHYTALPDWTQSLGMVMSLILFAPSWGGMINGIMTLSGAWHKLRTDPVLRFLVVSLSFY
GMSTFEGPMMAIKTVNALSHYTDWTVGHVHSGALGWVAMVSIGSLYHLIPVLFGHGRMYSIKLVNVHFWLATIGTVLYIV
SMWISGVMQGLMWRAVNADGTLTYSFVESLEASYPFYFVRFLGGCFFLTGMLIMAYNVIRTVKASKDSLPALAEAKAA
>Mature_478_residues
MMNHSQPTGADYNYTIVRQFALTTVLWGIVGMSVGVLIAAQLIWPHLNFDTPWFTYSRLRPLHTNAVIFAFGTSALFATS
YYVVQRTCQTRLFAPKLAAFTFWGWQAIILSAAITLPMGYTSGKEYAELEWPIDIAITIVWVSYAIVFFGTIIKRTTSHI
YVANWFFGAFIITVAVLHIVNSMAVPVSLFKSYSMYSGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAGRPVYSY
RLSIVHFWALIALYIWAGPHHLHYTALPDWTQSLGMVMSLILFAPSWGGMINGIMTLSGAWHKLRTDPVLRFLVVSLSFY
GMSTFEGPMMAIKTVNALSHYTDWTVGHVHSGALGWVAMVSIGSLYHLIPVLFGHGRMYSIKLVNVHFWLATIGTVLYIV
SMWISGVMQGLMWRAVNADGTLTYSFVESLEASYPFYFVRFLGGCFFLTGMLIMAYNVIRTVKASKDSLPALAEAKAA

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 53567; Mature: 53567

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNHSQPTGADYNYTIVRQFALTTVLWGIVGMSVGVLIAAQLIWPHLNFDTPWFTYSRLR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCC
PLHTNAVIFAFGTSALFATSYYVVQRTCQTRLFAPKLAAFTFWGWQAIILSAAITLPMGY
CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TSGKEYAELEWPIDIAITIVWVSYAIVFFGTIIKRTTSHIYVANWFFGAFIITVAVLHIV
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHH
NSMAVPVSLFKSYSMYSGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAGRPVYSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RLSIVHFWALIALYIWAGPHHLHYTALPDWTQSLGMVMSLILFAPSWGGMINGIMTLSGA
HHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
WHKLRTDPVLRFLVVSLSFYGMSTFEGPMMAIKTVNALSHYTDWTVGHVHSGALGWVAMV
HHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
SIGSLYHLIPVLFGHGRMYSIKLVNVHFWLATIGTVLYIVSMWISGVMQGLMWRAVNADG
HHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
TLTYSFVESLEASYPFYFVRFLGGCFFLTGMLIMAYNVIRTVKASKDSLPALAEAKAA
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCC
>Mature Secondary Structure
MMNHSQPTGADYNYTIVRQFALTTVLWGIVGMSVGVLIAAQLIWPHLNFDTPWFTYSRLR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCC
PLHTNAVIFAFGTSALFATSYYVVQRTCQTRLFAPKLAAFTFWGWQAIILSAAITLPMGY
CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TSGKEYAELEWPIDIAITIVWVSYAIVFFGTIIKRTTSHIYVANWFFGAFIITVAVLHIV
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHH
NSMAVPVSLFKSYSMYSGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAGRPVYSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RLSIVHFWALIALYIWAGPHHLHYTALPDWTQSLGMVMSLILFAPSWGGMINGIMTLSGA
HHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
WHKLRTDPVLRFLVVSLSFYGMSTFEGPMMAIKTVNALSHYTDWTVGHVHSGALGWVAMV
HHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
SIGSLYHLIPVLFGHGRMYSIKLVNVHFWLATIGTVLYIVSMWISGVMQGLMWRAVNADG
HHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
TLTYSFVESLEASYPFYFVRFLGGCFFLTGMLIMAYNVIRTVKASKDSLPALAEAKAA
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8386371; 12597275 [H]