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The map label for this gene is 117920522

Identifier: 117920522

GI number: 117920522

Start: 2487102

End: 2488103

Strand: Direct

Name: 117920522

Synonym: Shewana3_2078

Alternate gene names: NA

Gene position: 2487102-2488103 (Clockwise)

Preceding gene: 117920521

Following gene: 117920523

Centisome position: 50.02

GC content: 50.3

Gene sequence:

>1002_bases
ATGATAAGAGCAACAAATAGCCCCCTAGTCGAGCAGCGCGCCGATCCCTTTGTGTACCGACATAGCGACGGTTATTACTA
CTTTACGGGCTCAGTTCCGACCTACGATCGGATTGAACTGCGTAAAGCCAAGACCTTAGACGGCTTAAAAGACGCCCAAA
CCTTCGACATCTGGTTTAAACACCCAAGTGGCCCGATGAGCCGCCACGTATGGGCGCCCGAGATCCATTATCTCGATGGC
AAATGGTACATCTACTTTGCGGCCAGCGAAGAGGAAGATATTTGGGCATTGCGCCCCTATGTGCTTGAGTGCCAAGGGCA
AGATCCCTTGAATGATGAATGGATTGAACTTGGTATGATGCAGGCGGCCGATGGTGATAATAAGTCATTTATCGACTTTT
CCTTAGATGCGACCATTTTCGAAAACAACGGTAAGCGTTACTTCTGCTGGGCGGAGAAAACCGGTGGACAATTTGCGGCA
TCCAACCTGTATCTTGCGGAAATGGCATCGCCCATCAAGTTAAAGACGGCGCAATTTATGCTCACCACCCCAGATTACGA
TTGGGAGCGCGTCGATTTTTGGGTTAACGAAGGGCCTGCAGTACTTAAACATCAAGGAAAAATCTTTATTACCTTCTCGG
CCAGCGCGACAGGTGCTTGTTATTGCATGGGTTATATGGAGGCCGATGAGCATGCTGATCTGCTCGATCGTAACTCCTGG
AAGAAAACCCGCCAGCCAGTGCTGTGCACTGATGTCGACAAGCAAATCTTCGGTCCTGGTCATAACAGTTTCACCGTGGC
AGAAGATGGCGTGACGCCCATCTGTGTGTACCATGCCCGTGATTATGAACATGCGGTGGGCGATCCTAGTGTGGTGCCAA
AGACAGATACCCGTCCATTAGCGCAAATTATTAAAGATCCACTCTATGATCCCAATCGCCATGCGCGGACGCTAGCGGTG
TCATTTGATGAGAGCGGGCGCCCCTTGTTCGACCTCTACTAA

Upstream 100 bases:

>100_bases
AACCCTGCATCGGCAAGGCACGCAATCCCGCTAACAAGCGAAATGCATTTAATAAACACAAAATAGCACACTTAAGTAAT
CGAAATAGAAAGGTTTTTCC

Downstream 100 bases:

>100_bases
TTTATTTGCCGCCATAAATGATGTAATACCCGCGGGGCATGCTTCAGCAGCCCCGCTTTTTTATGCCCGATTGAAGCGCT
ATTGCTTAGGTAAAGCGCGA

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Alpha-N-arabinofuranosidase II; Alpha-N-AFase II; Arabinosidase II [H]

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MIRATNSPLVEQRADPFVYRHSDGYYYFTGSVPTYDRIELRKAKTLDGLKDAQTFDIWFKHPSGPMSRHVWAPEIHYLDG
KWYIYFAASEEEDIWALRPYVLECQGQDPLNDEWIELGMMQAADGDNKSFIDFSLDATIFENNGKRYFCWAEKTGGQFAA
SNLYLAEMASPIKLKTAQFMLTTPDYDWERVDFWVNEGPAVLKHQGKIFITFSASATGACYCMGYMEADEHADLLDRNSW
KKTRQPVLCTDVDKQIFGPGHNSFTVAEDGVTPICVYHARDYEHAVGDPSVVPKTDTRPLAQIIKDPLYDPNRHARTLAV
SFDESGRPLFDLY

Sequences:

>Translated_333_residues
MIRATNSPLVEQRADPFVYRHSDGYYYFTGSVPTYDRIELRKAKTLDGLKDAQTFDIWFKHPSGPMSRHVWAPEIHYLDG
KWYIYFAASEEEDIWALRPYVLECQGQDPLNDEWIELGMMQAADGDNKSFIDFSLDATIFENNGKRYFCWAEKTGGQFAA
SNLYLAEMASPIKLKTAQFMLTTPDYDWERVDFWVNEGPAVLKHQGKIFITFSASATGACYCMGYMEADEHADLLDRNSW
KKTRQPVLCTDVDKQIFGPGHNSFTVAEDGVTPICVYHARDYEHAVGDPSVVPKTDTRPLAQIIKDPLYDPNRHARTLAV
SFDESGRPLFDLY
>Mature_333_residues
MIRATNSPLVEQRADPFVYRHSDGYYYFTGSVPTYDRIELRKAKTLDGLKDAQTFDIWFKHPSGPMSRHVWAPEIHYLDG
KWYIYFAASEEEDIWALRPYVLECQGQDPLNDEWIELGMMQAADGDNKSFIDFSLDATIFENNGKRYFCWAEKTGGQFAA
SNLYLAEMASPIKLKTAQFMLTTPDYDWERVDFWVNEGPAVLKHQGKIFITFSASATGACYCMGYMEADEHADLLDRNSW
KKTRQPVLCTDVDKQIFGPGHNSFTVAEDGVTPICVYHARDYEHAVGDPSVVPKTDTRPLAQIIKDPLYDPNRHARTLAV
SFDESGRPLFDLY

Specific function: Unknown

COG id: COG3940

COG function: function code R; Predicted beta-xylosidase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 43 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016828
- InterPro:   IPR006710
- InterPro:   IPR006311 [H]

Pfam domain/function: PF04616 Glyco_hydro_43 [H]

EC number: =3.2.1.55 [H]

Molecular weight: Translated: 38099; Mature: 38099

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRATNSPLVEQRADPFVYRHSDGYYYFTGSVPTYDRIELRKAKTLDGLKDAQTFDIWFK
CCCCCCCCHHHHCCCCEEEEECCCEEEEECCCCCCCCEEEEHHHCCCCCCCCEEEEEEEE
HPSGPMSRHVWAPEIHYLDGKWYIYFAASEEEDIWALRPYVLECQGQDPLNDEWIELGMM
CCCCCHHCCCCCCEEEEECCEEEEEEEECCCCCEEEECCEEEEECCCCCCCHHHHEEEEE
QAADGDNKSFIDFSLDATIFENNGKRYFCWAEKTGGQFAASNLYLAEMASPIKLKTAQFM
EECCCCCCEEEEEEEEEEEEECCCCEEEEEEECCCCEEEECCEEEECCCCCEEEEEEEEE
LTTPDYDWERVDFWVNEGPAVLKHQGKIFITFSASATGACYCMGYMEADEHADLLDRNSW
EECCCCCCEEEEEEECCCCEEEEECCEEEEEEECCCCCEEEEEEECCCCCCHHHHCCCCC
KKTRQPVLCTDVDKQIFGPGHNSFTVAEDGVTPICVYHARDYEHAVGDPSVVPKTDTRPL
HHHCCCEEEECCCHHHCCCCCCCEEEECCCCCEEEEEECCCCHHHCCCCCCCCCCCCHHH
AQIIKDPLYDPNRHARTLAVSFDESGRPLFDLY
HHHHHCCCCCCCCCEEEEEEEECCCCCEEEECC
>Mature Secondary Structure
MIRATNSPLVEQRADPFVYRHSDGYYYFTGSVPTYDRIELRKAKTLDGLKDAQTFDIWFK
CCCCCCCCHHHHCCCCEEEEECCCEEEEECCCCCCCCEEEEHHHCCCCCCCCEEEEEEEE
HPSGPMSRHVWAPEIHYLDGKWYIYFAASEEEDIWALRPYVLECQGQDPLNDEWIELGMM
CCCCCHHCCCCCCEEEEECCEEEEEEEECCCCCEEEECCEEEEECCCCCCCHHHHEEEEE
QAADGDNKSFIDFSLDATIFENNGKRYFCWAEKTGGQFAASNLYLAEMASPIKLKTAQFM
EECCCCCCEEEEEEEEEEEEECCCCEEEEEEECCCCEEEECCEEEECCCCCEEEEEEEEE
LTTPDYDWERVDFWVNEGPAVLKHQGKIFITFSASATGACYCMGYMEADEHADLLDRNSW
EECCCCCCEEEEEEECCCCEEEEECCEEEEEEECCCCCEEEEEEECCCCCCHHHHCCCCC
KKTRQPVLCTDVDKQIFGPGHNSFTVAEDGVTPICVYHARDYEHAVGDPSVVPKTDTRPL
HHHCCCEEEECCCHHHCCCCCCCEEEECCCCCEEEEEECCCCHHHCCCCCCCCCCCCHHH
AQIIKDPLYDPNRHARTLAVSFDESGRPLFDLY
HHHHHCCCCCCCCCEEEEEEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10657233 [H]