| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920480
Identifier: 117920480
GI number: 117920480
Start: 2435122
End: 2436213
Strand: Direct
Name: 117920480
Synonym: Shewana3_2035
Alternate gene names: NA
Gene position: 2435122-2436213 (Clockwise)
Preceding gene: 117920479
Following gene: 117920481
Centisome position: 48.97
GC content: 44.78
Gene sequence:
>1092_bases ATGGGTTACGAAGTAGATTTTTTAGGTGTAGGCAGCGAGTCTAAAAGTGGCGATGCTATTGCCATCCGTTTTGGCAATTT GCATGGCCGCCGGGACGAACAAACAGTGGTGGTGATTGATGGTGGATTTAGTGATACCGGTTCTGAATTGGTAGAACACA TCCGCATACACTTTGGGACTGACATCGTTGATTTGGTTATTAGTTCTCATCCAGATCAAGACCACATTAATGGTCTTGAA GCGTTATTAAATGAGCTGGATGTCAAAGAGCTGTGGTTGCACCAACCATGGCTACACAACCAGAACTTAGCTGATGAATT TGCTGATGGCCGTTTAACTGACTCAAGTCTGGGTGAGCGTTTAAAGCAAAACTTAGAGCGTGCCTGGTCACTGGCAAAAT TGGCGAACCGCAAAGGTATTTTGATAAAAGAGCCATTCACTGGGCTTACCGATAAATCAGGTTCGGTCAAAGTTTTGGGA CCCAGCCAGTCTTATTACGAATCATTAATCCCCGATTTTGATGGAATGCCAAAACGTGCTGAAGCAAGTACTGTCGCCAA CGAGAGCTGGTTTGATAAAGCTGTACGTAATGTAAAAACATTTCTTGCAAACTGGGGAGAGGATCATATTTCAGATGATG GCCAAACTTCAGCAAAAAATAATTCGAGCGTAATTACCCAGTTTATCGTAGATGGAAGGCGTCTAGTCTTTACTGCGGAT GCGGGGATTCAGGCATTAGAGCATGCCGCCGAACAAATTGAGTCATGTTACTCTGGCGCTGAGTTGAAGTTTATACAAAT CCCACACCATGGAAGTAAACGTAATATCGGGCCAACAGTATTAAACCGTTTGATTGGTAGTCCTGTGGTGCACAGCTCTG CACGCGATATAACGGCAATTGCATCAACCGCTAAAGCGGGGGAGCCGAAGCATCCAAGGAAGGCTGTGTTAAATGCATTC ACCCATCGCGGTGCCAGAGTATTGGTTACTCGTGGGCAAGGGATACTACATTATCATAATTCACCTGGGCGTTCAGGATG GTCTTCATTAAATGCTGAGCCATATCACTTCTCTTATGAAGAGGAAGTGTAA
Upstream 100 bases:
>100_bases TTGATTGATTTAGTCTATCATTTTGAATTTTAATGGGTTTGTTGTGGTGGCATGCCTCGTGAATTATCTCCTGTGAAAAA CATTTCATAGGAGATTCAAA
Downstream 100 bases:
>100_bases TCATGGCTTGGATTTCATTAAAAGCACAGAATTTACCGTCATTAACTTCAATCATTATTGCGCAGTTATCGGTTGCTTAT GCTTTGTCAAACTCAGGCTT
Product: metallo-beta-lactamase superfamily hydrolase
Products: NA
Alternate protein names: Beta-Lactamase-Like; Hydrolase
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MGYEVDFLGVGSESKSGDAIAIRFGNLHGRRDEQTVVVIDGGFSDTGSELVEHIRIHFGTDIVDLVISSHPDQDHINGLE ALLNELDVKELWLHQPWLHNQNLADEFADGRLTDSSLGERLKQNLERAWSLAKLANRKGILIKEPFTGLTDKSGSVKVLG PSQSYYESLIPDFDGMPKRAEASTVANESWFDKAVRNVKTFLANWGEDHISDDGQTSAKNNSSVITQFIVDGRRLVFTAD AGIQALEHAAEQIESCYSGAELKFIQIPHHGSKRNIGPTVLNRLIGSPVVHSSARDITAIASTAKAGEPKHPRKAVLNAF THRGARVLVTRGQGILHYHNSPGRSGWSSLNAEPYHFSYEEEV
Sequences:
>Translated_363_residues MGYEVDFLGVGSESKSGDAIAIRFGNLHGRRDEQTVVVIDGGFSDTGSELVEHIRIHFGTDIVDLVISSHPDQDHINGLE ALLNELDVKELWLHQPWLHNQNLADEFADGRLTDSSLGERLKQNLERAWSLAKLANRKGILIKEPFTGLTDKSGSVKVLG PSQSYYESLIPDFDGMPKRAEASTVANESWFDKAVRNVKTFLANWGEDHISDDGQTSAKNNSSVITQFIVDGRRLVFTAD AGIQALEHAAEQIESCYSGAELKFIQIPHHGSKRNIGPTVLNRLIGSPVVHSSARDITAIASTAKAGEPKHPRKAVLNAF THRGARVLVTRGQGILHYHNSPGRSGWSSLNAEPYHFSYEEEV >Mature_362_residues GYEVDFLGVGSESKSGDAIAIRFGNLHGRRDEQTVVVIDGGFSDTGSELVEHIRIHFGTDIVDLVISSHPDQDHINGLEA LLNELDVKELWLHQPWLHNQNLADEFADGRLTDSSLGERLKQNLERAWSLAKLANRKGILIKEPFTGLTDKSGSVKVLGP SQSYYESLIPDFDGMPKRAEASTVANESWFDKAVRNVKTFLANWGEDHISDDGQTSAKNNSSVITQFIVDGRRLVFTADA GIQALEHAAEQIESCYSGAELKFIQIPHHGSKRNIGPTVLNRLIGSPVVHSSARDITAIASTAKAGEPKHPRKAVLNAFT HRGARVLVTRGQGILHYHNSPGRSGWSSLNAEPYHFSYEEEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39934; Mature: 39803
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYEVDFLGVGSESKSGDAIAIRFGNLHGRRDEQTVVVIDGGFSDTGSELVEHIRIHFGT CCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCC DIVDLVISSHPDQDHINGLEALLNELDVKELWLHQPWLHNQNLADEFADGRLTDSSLGER HHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHH LKQNLERAWSLAKLANRKGILIKEPFTGLTDKSGSVKVLGPSQSYYESLIPDFDGMPKRA HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCC EASTVANESWFDKAVRNVKTFLANWGEDHISDDGQTSAKNNSSVITQFIVDGRRLVFTAD HHHHHCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEC AGIQALEHAAEQIESCYSGAELKFIQIPHHGSKRNIGPTVLNRLIGSPVVHSSARDITAI HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHH ASTAKAGEPKHPRKAVLNAFTHRGARVLVTRGQGILHYHNSPGRSGWSSLNAEPYHFSYE HHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCHHCCCCCCCCCCCC EEV CCC >Mature Secondary Structure GYEVDFLGVGSESKSGDAIAIRFGNLHGRRDEQTVVVIDGGFSDTGSELVEHIRIHFGT CEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCC DIVDLVISSHPDQDHINGLEALLNELDVKELWLHQPWLHNQNLADEFADGRLTDSSLGER HHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHH LKQNLERAWSLAKLANRKGILIKEPFTGLTDKSGSVKVLGPSQSYYESLIPDFDGMPKRA HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCC EASTVANESWFDKAVRNVKTFLANWGEDHISDDGQTSAKNNSSVITQFIVDGRRLVFTAD HHHHHCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEC AGIQALEHAAEQIESCYSGAELKFIQIPHHGSKRNIGPTVLNRLIGSPVVHSSARDITAI HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHH ASTAKAGEPKHPRKAVLNAFTHRGARVLVTRGQGILHYHNSPGRSGWSSLNAEPYHFSYE HHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCHHCCCCCCCCCCCC EEV CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA