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The map label for this gene is tarF [H]

Identifier: 117920447

GI number: 117920447

Start: 2386366

End: 2387763

Strand: Reverse

Name: tarF [H]

Synonym: Shewana3_2002

Alternate gene names: 117920447

Gene position: 2387763-2386366 (Counterclockwise)

Preceding gene: 117920448

Following gene: 117920445

Centisome position: 48.02

GC content: 47.93

Gene sequence:

>1398_bases
ATGGGCACAAATCTAGCATTAGCCTTACTGAAGAAATGCATTTTCACCCTCTCTTGGTTAGTACCAAGAAACGCTAACAA
GGCGGTATTAGGTTGCTACAAGAACCGTTTTGCTGACAATAGCAAATACCTGTTTTTGCATTGGCAGCAGACGCACTTTA
TGCAAACCATTTGGATAAGCGGCGATAAAGCCCTTATCCATGCCCTCAGGCAACAAGGCTATACCGCCCATTCGCGCTGG
AGCCTGCTGGGCATTTACCATGCGCTCACGGCCAAATACTATGTGTACAATAGTTATATTGGCGATATTAATCAGTGGCT
TGCAGCAGGCGCGATTCGTATCAATCTCTGGCATGGCTCGCCACTTAAAAAAATCGAGTTTGATATCACCACAGGGCCAT
TGGCCCCCAAGTATCAAACCCAGTCCCTTTGGCAAGCTGGGCTGCAGGCGCTGCGTTATCATCAGGAATATGTCCGTCCG
AGTTTGATGCTAAGCCCAAGCCCATTGGTCGGTGAGAGTTTCCGACGCGCCTTTCGGTTAAAAGAAGATTCCCTGCTATC
AAGCACTAATCCGCGCACCGATTACTATCTGCGTTACCCAGAGCAACGCCAAACGTTGCCCTTAAAGGCGGATGCGACGG
CCTATCGCCGAGTGATTCTCTACGCCCCTTCTTGGCGGGATGCCCTATGGCAAAATAGTCAGAATGTAGCTTCACATTCG
ACCCCACATTTAACGGGAGGTCATAGCGATTCGCCCTACCAAGCCGCCTTTGACTGGCAAAGCCTGTCCCAACATTTAGT
CGATACAGATACCTTGTTACTGTTACGCCTGCATCCCAATGAACGCCACTACGCAGCGCAGTTTTGTGCCTATCCCAATG
TACTCGATATCAGCGATTGGGACAATATTTATGGGATTTTGCATCGTGTCGACCTGCTGATCACCGATTATTCGTCGTTA
TTTATCGATGTACTGCCACTTGAGATCCCTGTCCTCTTCTACCGTTTTGACCATGAGCAGTATCTCAACCAAAGCCGTGA
TTGCTACGATATAGGTCAAGATCCGCTCAGTATTGGCCAGGTCGCCTATCAATTCGATGACTTATTGGCACTGCTGCAAG
AGATGAGTCACCTTAACGCCAAACCCCAGCCCTGCGAGGCTTACAAACAATTACAGCGTTTGTATTGGTCGCAGCATGCT
ATGGGTTCATCAGCAGACAGTTTAGCGACTGATGGTTTGTCTATTGATGGTGTATCTATGGTTTGTGTATCTATGGTTGG
TATATCTATGAATGAAAGGCATGATGATAGTTTTGCGCGCTTAGAACGGCATCTGCGCCAAGGGCAAACTCAGTCGTATA
AGTTGGCCTTTGGCACTGATATCAAGCCTCAAATATGA

Upstream 100 bases:

>100_bases
CTATGCCACACACTAAGGTGGCGCTAGCGATTCCCCAATTGATTAAGTAAGGCCGAGATTGAAGGAAATCATCGAAATCA
AAGGGTAAGTGAGGGATATC

Downstream 100 bases:

>100_bases
AAGTTCAGATATTAAGGCTCTGGTATAAAGCCATTTATAAGAAGGTGTCTTTAAACCAATCCCAGATCCCGAGTGAGATT
TCGGGTAATAAATCGATACC

Product: peptidyl-dipeptidase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MGTNLALALLKKCIFTLSWLVPRNANKAVLGCYKNRFADNSKYLFLHWQQTHFMQTIWISGDKALIHALRQQGYTAHSRW
SLLGIYHALTAKYYVYNSYIGDINQWLAAGAIRINLWHGSPLKKIEFDITTGPLAPKYQTQSLWQAGLQALRYHQEYVRP
SLMLSPSPLVGESFRRAFRLKEDSLLSSTNPRTDYYLRYPEQRQTLPLKADATAYRRVILYAPSWRDALWQNSQNVASHS
TPHLTGGHSDSPYQAAFDWQSLSQHLVDTDTLLLLRLHPNERHYAAQFCAYPNVLDISDWDNIYGILHRVDLLITDYSSL
FIDVLPLEIPVLFYRFDHEQYLNQSRDCYDIGQDPLSIGQVAYQFDDLLALLQEMSHLNAKPQPCEAYKQLQRLYWSQHA
MGSSADSLATDGLSIDGVSMVCVSMVGISMNERHDDSFARLERHLRQGQTQSYKLAFGTDIKPQI

Sequences:

>Translated_465_residues
MGTNLALALLKKCIFTLSWLVPRNANKAVLGCYKNRFADNSKYLFLHWQQTHFMQTIWISGDKALIHALRQQGYTAHSRW
SLLGIYHALTAKYYVYNSYIGDINQWLAAGAIRINLWHGSPLKKIEFDITTGPLAPKYQTQSLWQAGLQALRYHQEYVRP
SLMLSPSPLVGESFRRAFRLKEDSLLSSTNPRTDYYLRYPEQRQTLPLKADATAYRRVILYAPSWRDALWQNSQNVASHS
TPHLTGGHSDSPYQAAFDWQSLSQHLVDTDTLLLLRLHPNERHYAAQFCAYPNVLDISDWDNIYGILHRVDLLITDYSSL
FIDVLPLEIPVLFYRFDHEQYLNQSRDCYDIGQDPLSIGQVAYQFDDLLALLQEMSHLNAKPQPCEAYKQLQRLYWSQHA
MGSSADSLATDGLSIDGVSMVCVSMVGISMNERHDDSFARLERHLRQGQTQSYKLAFGTDIKPQI
>Mature_464_residues
GTNLALALLKKCIFTLSWLVPRNANKAVLGCYKNRFADNSKYLFLHWQQTHFMQTIWISGDKALIHALRQQGYTAHSRWS
LLGIYHALTAKYYVYNSYIGDINQWLAAGAIRINLWHGSPLKKIEFDITTGPLAPKYQTQSLWQAGLQALRYHQEYVRPS
LMLSPSPLVGESFRRAFRLKEDSLLSSTNPRTDYYLRYPEQRQTLPLKADATAYRRVILYAPSWRDALWQNSQNVASHST
PHLTGGHSDSPYQAAFDWQSLSQHLVDTDTLLLLRLHPNERHYAAQFCAYPNVLDISDWDNIYGILHRVDLLITDYSSLF
IDVLPLEIPVLFYRFDHEQYLNQSRDCYDIGQDPLSIGQVAYQFDDLLALLQEMSHLNAKPQPCEAYKQLQRLYWSQHAM
GSSADSLATDGLSIDGVSMVCVSMVGISMNERHDDSFARLERHLRQGQTQSYKLAFGTDIKPQI

Specific function: Catalyzes the addition of a second single glycerol-P residue to the prenolpyrophosphate-linked dissacharide, to complete the linkage unit (Potential) [H]

COG id: COG1887

COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-glycerol glycerophosphotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007554 [H]

Pfam domain/function: PF04464 Glyphos_transf [H]

EC number: NA

Molecular weight: Translated: 53446; Mature: 53315

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTNLALALLKKCIFTLSWLVPRNANKAVLGCYKNRFADNSKYLFLHWQQTHFMQTIWIS
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
GDKALIHALRQQGYTAHSRWSLLGIYHALTAKYYVYNSYIGDINQWLAAGAIRINLWHGS
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHCCEEEEEEECCC
PLKKIEFDITTGPLAPKYQTQSLWQAGLQALRYHQEYVRPSLMLSPSPLVGESFRRAFRL
CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHC
KEDSLLSSTNPRTDYYLRYPEQRQTLPLKADATAYRRVILYAPSWRDALWQNSQNVASHS
CHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCHHEEEEEEECCCHHHHHHCCCCCHHCCC
TPHLTGGHSDSPYQAAFDWQSLSQHLVDTDTLLLLRLHPNERHYAAQFCAYPNVLDISDW
CCCCCCCCCCCCCCHHCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCCEEECCCH
DNIYGILHRVDLLITDYSSLFIDVLPLEIPVLFYRFDHEQYLNQSRDCYDIGQDPLSIGQ
HHHHHHHHHHHHHHHCHHHHHHHHHHHHEEEEEEEECHHHHHCCCCCCHHCCCCCHHHHH
VAYQFDDLLALLQEMSHLNAKPQPCEAYKQLQRLYWSQHAMGSSADSLATDGLSIDGVSM
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHH
VCVSMVGISMNERHDDSFARLERHLRQGQTQSYKLAFGTDIKPQI
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure 
GTNLALALLKKCIFTLSWLVPRNANKAVLGCYKNRFADNSKYLFLHWQQTHFMQTIWIS
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
GDKALIHALRQQGYTAHSRWSLLGIYHALTAKYYVYNSYIGDINQWLAAGAIRINLWHGS
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHCCEEEEEEECCC
PLKKIEFDITTGPLAPKYQTQSLWQAGLQALRYHQEYVRPSLMLSPSPLVGESFRRAFRL
CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHC
KEDSLLSSTNPRTDYYLRYPEQRQTLPLKADATAYRRVILYAPSWRDALWQNSQNVASHS
CHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCHHEEEEEEECCCHHHHHHCCCCCHHCCC
TPHLTGGHSDSPYQAAFDWQSLSQHLVDTDTLLLLRLHPNERHYAAQFCAYPNVLDISDW
CCCCCCCCCCCCCCHHCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCCEEECCCH
DNIYGILHRVDLLITDYSSLFIDVLPLEIPVLFYRFDHEQYLNQSRDCYDIGQDPLSIGQ
HHHHHHHHHHHHHHHCHHHHHHHHHHHHEEEEEEEECHHHHHCCCCCCHHCCCCCHHHHH
VAYQFDDLLALLQEMSHLNAKPQPCEAYKQLQRLYWSQHAMGSSADSLATDGLSIDGVSM
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHH
VCVSMVGISMNERHDDSFARLERHLRQGQTQSYKLAFGTDIKPQI
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11882717 [H]