| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920391
Identifier: 117920391
GI number: 117920391
Start: 2313761
End: 2315701
Strand: Reverse
Name: 117920391
Synonym: Shewana3_1946
Alternate gene names: NA
Gene position: 2315701-2313761 (Counterclockwise)
Preceding gene: 117920392
Following gene: 117920390
Centisome position: 46.57
GC content: 49.87
Gene sequence:
>1941_bases ATGCAAAAATCCATTTTAACGGCTAGCCTGTTTGGCTGGTGTTTATCCACTCTCGGTGCAGCCTATGCTGCGCCAAGCCC TGTGCCGCTGCTGGTTGAGCAGTGTTTGCGCCAACCCAATATCGATTTGGCTGGCGCCTTCGCCAGTTATGCTCGCACCC GCAATCTATCTGCCTTAACACTGGCGGATAAGGTCCTAGTGTTAGAGCAGCAAACCATAGGGCTCAATAACGTCAACGAC AGACTCACCTACTACCGAGGTTTGCCGCTGTCGGGGGATGAGCGCCAAGGTTTACTACAGTGTCAGTTGCGCTTGGCCGA CACTCTGAGCCACTTACTAAACCAAGCTGAATTTAGCCAACTGGCGTTTGAGCTGACACAAGCAGCTTCAGAAAATGATG ATGCAGCAAATCAGGAACAGGTGTTGCTCGGTGAGCAATTAACGGCTTTGTTGCGCCAGCATTTATCCATTATGGATAAA GCCAAGCTGCACACGGCGCAGGCCAGCATTCGCCAAGGCTTGGGCAACCAACAATTTCAACTGGATATTCAAGCAGATAA ATGCCAGCTTACAGATGAAGTAGCCGAAGTTAATACGACCAATAACGAGGAAGAAACATCTGATAAGGATGCGCAGCAGC CAAGCTCTCGCTTCTCAGGCACTATCGCGAGTTATCTGTTAAAGCAACCCGATGCCGAATGCCGTCAAACCCTATGGCAA GCCTATCAAGGTCGAGCTAGGGAGCATAATCAAGTCGCTTTACACCGTATTGCCGAGCTGCGTCAACGCCTCGCCAATGA CGCAGGTTTTAGCGACTACGCCAGTTACAGCCTCAAGGATCAGCTACTCAATACCCCTGAGTTAGTTAAAGCGTTTCTCG ACAGCCAAACCGAAGCGATTCAAGTTGCCCCTTGGGATCTTGGCCGTACCTTATCGCAATTACCCAGTGCACAAACCACC GCCCTCAATACCCGAGAGCTACTCGACAAGGCCTTAACAACCTTAGGCGAGTTTGGTTTACGTTTTGAGGTGATTGGCGA ACATCTAGATTCAACAGCCACGCAAACGACACTTTCTCAAACGGTACTTTCTCAAACGGCACCAGCACAAGCGCAGCAAC AGATCCTCCGCGTTTATCATATGGATAGATTACTGGGGGAAGTGTACCTGGCCATTGGTGCTCAAGATGAAGTGAATAAA CTTGGGAATGCCAGTCAACACACCCTCAGGCAAAGTGTGATTGGGCAGCAATTTGGTCAACAGGCGCTCGAGCTGCCCGC GACACTCAATAATTTCAAAGATATTGAACGCTTTACCCAAGCCCTTGCCGATGCGATAACCTCGCTGGCACGCGGCAGTC ATTTTTACCTTAACAACACCTTAGGCCCGACGCTCGATACCAATCAATTACCAAGCCTTTGGCTCGCTAAGGTGTTACGC CAAGCACTATTTCCCCAATTTGATACCCAATATATTCAACCGAGGGAAACGCTCGCAAGCGCCTATGCGACTCAGCTTAA AGTCTTTCGCGCTAAGGTGGCACTTAACTTTTACCAGTCCTTAAACCAGCAGAGCTATCCGGATTTACCTGCTGAATTTA GCAAAAGCTTTGGGGCGAACTGGGCGCAAGCGATTGATTACCCATATAGTTTCAATGCTATCGCCAGCGAAGGCCCACGC TATTATCAATCCCTGTGGCAAGCCAAGCTCGCGACGCTTGTCCATCAATCCACCCAAGACTGCCAAGATAAACTTGGGCT TTTTAATCTCCTCGTGGTCAATGAGACCGCACTCACCTTGAGCGAGCAACTGCGCGCCATACTTGGCGAACCCGTGGATG CCGCTGCGCTTATCCAAAGGATTATCCATGTCTCAGGATCTGAAAATCACCCACACACCACAACCGAAACACAAACTCAC ACTATCCATTGCGCTTTTTAG
Upstream 100 bases:
>100_bases CTGGCGATCCAGATTGCAAATGGAAAAGGCATTTTGCCTAGACTTAAGCATGTCGAAGCCATGTCATCCCATTCAATGAC AGTTGCAGAACGTGTAGCCT
Downstream 100 bases:
>100_bases CGGTTTAACCTTCTTTACCGCGCAGAGTGCTTTCGCCAATTCGCAAAGCACGCTCCTAAGTCACGCTGGGCTTGAGAACT CACAAAACTTTCTCAAGCCA
Product: response regulator receiver protein
Products: NA
Alternate protein names: Peptidase M3A And M3B Thimet/Oligopeptidase F
Number of amino acids: Translated: 646; Mature: 646
Protein sequence:
>646_residues MQKSILTASLFGWCLSTLGAAYAAPSPVPLLVEQCLRQPNIDLAGAFASYARTRNLSALTLADKVLVLEQQTIGLNNVND RLTYYRGLPLSGDERQGLLQCQLRLADTLSHLLNQAEFSQLAFELTQAASENDDAANQEQVLLGEQLTALLRQHLSIMDK AKLHTAQASIRQGLGNQQFQLDIQADKCQLTDEVAEVNTTNNEEETSDKDAQQPSSRFSGTIASYLLKQPDAECRQTLWQ AYQGRAREHNQVALHRIAELRQRLANDAGFSDYASYSLKDQLLNTPELVKAFLDSQTEAIQVAPWDLGRTLSQLPSAQTT ALNTRELLDKALTTLGEFGLRFEVIGEHLDSTATQTTLSQTVLSQTAPAQAQQQILRVYHMDRLLGEVYLAIGAQDEVNK LGNASQHTLRQSVIGQQFGQQALELPATLNNFKDIERFTQALADAITSLARGSHFYLNNTLGPTLDTNQLPSLWLAKVLR QALFPQFDTQYIQPRETLASAYATQLKVFRAKVALNFYQSLNQQSYPDLPAEFSKSFGANWAQAIDYPYSFNAIASEGPR YYQSLWQAKLATLVHQSTQDCQDKLGLFNLLVVNETALTLSEQLRAILGEPVDAAALIQRIIHVSGSENHPHTTTETQTH TIHCAF
Sequences:
>Translated_646_residues MQKSILTASLFGWCLSTLGAAYAAPSPVPLLVEQCLRQPNIDLAGAFASYARTRNLSALTLADKVLVLEQQTIGLNNVND RLTYYRGLPLSGDERQGLLQCQLRLADTLSHLLNQAEFSQLAFELTQAASENDDAANQEQVLLGEQLTALLRQHLSIMDK AKLHTAQASIRQGLGNQQFQLDIQADKCQLTDEVAEVNTTNNEEETSDKDAQQPSSRFSGTIASYLLKQPDAECRQTLWQ AYQGRAREHNQVALHRIAELRQRLANDAGFSDYASYSLKDQLLNTPELVKAFLDSQTEAIQVAPWDLGRTLSQLPSAQTT ALNTRELLDKALTTLGEFGLRFEVIGEHLDSTATQTTLSQTVLSQTAPAQAQQQILRVYHMDRLLGEVYLAIGAQDEVNK LGNASQHTLRQSVIGQQFGQQALELPATLNNFKDIERFTQALADAITSLARGSHFYLNNTLGPTLDTNQLPSLWLAKVLR QALFPQFDTQYIQPRETLASAYATQLKVFRAKVALNFYQSLNQQSYPDLPAEFSKSFGANWAQAIDYPYSFNAIASEGPR YYQSLWQAKLATLVHQSTQDCQDKLGLFNLLVVNETALTLSEQLRAILGEPVDAAALIQRIIHVSGSENHPHTTTETQTH TIHCAF >Mature_646_residues MQKSILTASLFGWCLSTLGAAYAAPSPVPLLVEQCLRQPNIDLAGAFASYARTRNLSALTLADKVLVLEQQTIGLNNVND RLTYYRGLPLSGDERQGLLQCQLRLADTLSHLLNQAEFSQLAFELTQAASENDDAANQEQVLLGEQLTALLRQHLSIMDK AKLHTAQASIRQGLGNQQFQLDIQADKCQLTDEVAEVNTTNNEEETSDKDAQQPSSRFSGTIASYLLKQPDAECRQTLWQ AYQGRAREHNQVALHRIAELRQRLANDAGFSDYASYSLKDQLLNTPELVKAFLDSQTEAIQVAPWDLGRTLSQLPSAQTT ALNTRELLDKALTTLGEFGLRFEVIGEHLDSTATQTTLSQTVLSQTAPAQAQQQILRVYHMDRLLGEVYLAIGAQDEVNK LGNASQHTLRQSVIGQQFGQQALELPATLNNFKDIERFTQALADAITSLARGSHFYLNNTLGPTLDTNQLPSLWLAKVLR QALFPQFDTQYIQPRETLASAYATQLKVFRAKVALNFYQSLNQQSYPDLPAEFSKSFGANWAQAIDYPYSFNAIASEGPR YYQSLWQAKLATLVHQSTQDCQDKLGLFNLLVVNETALTLSEQLRAILGEPVDAAALIQRIIHVSGSENHPHTTTETQTH TIHCAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71677; Mature: 71677
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKSILTASLFGWCLSTLGAAYAAPSPVPLLVEQCLRQPNIDLAGAFASYARTRNLSALT CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHH LADKVLVLEQQTIGLNNVNDRLTYYRGLPLSGDERQGLLQCQLRLADTLSHLLNQAEFSQ HHHHHHHEEHHHCCCCCCCCHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LAFELTQAASENDDAANQEQVLLGEQLTALLRQHLSIMDKAKLHTAQASIRQGLGNQQFQ HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LDIQADKCQLTDEVAEVNTTNNEEETSDKDAQQPSSRFSGTIASYLLKQPDAECRQTLWQ EEEECCHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHH AYQGRAREHNQVALHRIAELRQRLANDAGFSDYASYSLKDQLLNTPELVKAFLDSQTEAI HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCEE QVAPWDLGRTLSQLPSAQTTALNTRELLDKALTTLGEFGLRFEVIGEHLDSTATQTTLSQ EECCCHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH TVLSQTAPAQAQQQILRVYHMDRLLGEVYLAIGAQDEVNKLGNASQHTLRQSVIGQQFGQ HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHH QALELPATLNNFKDIERFTQALADAITSLARGSHFYLNNTLGPTLDTNQLPSLWLAKVLR HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHH QALFPQFDTQYIQPRETLASAYATQLKVFRAKVALNFYQSLNQQSYPDLPAEFSKSFGAN HHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC WAQAIDYPYSFNAIASEGPRYYQSLWQAKLATLVHQSTQDCQDKLGLFNLLVVNETALTL HHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEECHHHHHH SEQLRAILGEPVDAAALIQRIIHVSGSENHPHTTTETQTHTIHCAF HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MQKSILTASLFGWCLSTLGAAYAAPSPVPLLVEQCLRQPNIDLAGAFASYARTRNLSALT CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHH LADKVLVLEQQTIGLNNVNDRLTYYRGLPLSGDERQGLLQCQLRLADTLSHLLNQAEFSQ HHHHHHHEEHHHCCCCCCCCHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LAFELTQAASENDDAANQEQVLLGEQLTALLRQHLSIMDKAKLHTAQASIRQGLGNQQFQ HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LDIQADKCQLTDEVAEVNTTNNEEETSDKDAQQPSSRFSGTIASYLLKQPDAECRQTLWQ EEEECCHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHH AYQGRAREHNQVALHRIAELRQRLANDAGFSDYASYSLKDQLLNTPELVKAFLDSQTEAI HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCEE QVAPWDLGRTLSQLPSAQTTALNTRELLDKALTTLGEFGLRFEVIGEHLDSTATQTTLSQ EECCCHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH TVLSQTAPAQAQQQILRVYHMDRLLGEVYLAIGAQDEVNKLGNASQHTLRQSVIGQQFGQ HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHH QALELPATLNNFKDIERFTQALADAITSLARGSHFYLNNTLGPTLDTNQLPSLWLAKVLR HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHH QALFPQFDTQYIQPRETLASAYATQLKVFRAKVALNFYQSLNQQSYPDLPAEFSKSFGAN HHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC WAQAIDYPYSFNAIASEGPRYYQSLWQAKLATLVHQSTQDCQDKLGLFNLLVVNETALTL HHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEECHHHHHH SEQLRAILGEPVDAAALIQRIIHVSGSENHPHTTTETQTHTIHCAF HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA