Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117920373

Identifier: 117920373

GI number: 117920373

Start: 2293035

End: 2293550

Strand: Direct

Name: 117920373

Synonym: Shewana3_1928

Alternate gene names: NA

Gene position: 2293035-2293550 (Clockwise)

Preceding gene: 117920372

Following gene: 117920377

Centisome position: 46.12

GC content: 48.06

Gene sequence:

>516_bases
ATGAAACGTTATTTCACGGCAGTCTTATTCGCACTGTTCTCTGAAGTCGCACTGTTTTCAGAAGTCACAGTTGCTGAGCC
ACTTAAGTGGCAGACAAGATTAGCAGATCATGACGCGATGATTTTTGCCTCAAGCACGGGTGTAGATAGCTTGAAAGATG
CGATAGCCGCAGTTCCCAAGTCGGTGTGGATTCGCTCGGTACAAGTGTCACCCCTTGCACAGTTCGATGGTTTTCAGCAC
GAGTTGCACACTTATCTGCAGCAACATTATCCGCAGATGTTAGCCGATGCCTTGGCTTCGGCGGGCAATATACATAACTC
AAAGGTGGTGGCCCTACGGCAGGGATTTAAGGAAGCCACTCTCGCCTCAGGTTTTGTTAAGCTGATGAATGCCGATTTTA
GTGCGCGCTGCGAAAGAATCACCTCAGTCGATATCGAGAAGTTTTTTATCACGACACAATCCTCATCACCCCAATTTGAA
GCCATGCTCTGGTTAAAGACCGAACAGTGCCACTAG

Upstream 100 bases:

>100_bases
TTGAACAGGGATTACAACATAAGGATATGCTGCGATTAGCGCTGGAATTATAAGCCGTGCTGACGATTATGGACGTAATG
ACAAATCGAAAGGATCTCGG

Downstream 100 bases:

>100_bases
GCTACAAAAATCCCTTATCTAGCGTGAGTCACTATCAATATTTCCTTGACCAAACTGCTATCCCTCTTTACTGAGTCAGC
CAATCAATGCTGTTAGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKRYFTAVLFALFSEVALFSEVTVAEPLKWQTRLADHDAMIFASSTGVDSLKDAIAAVPKSVWIRSVQVSPLAQFDGFQH
ELHTYLQQHYPQMLADALASAGNIHNSKVVALRQGFKEATLASGFVKLMNADFSARCERITSVDIEKFFITTQSSSPQFE
AMLWLKTEQCH

Sequences:

>Translated_171_residues
MKRYFTAVLFALFSEVALFSEVTVAEPLKWQTRLADHDAMIFASSTGVDSLKDAIAAVPKSVWIRSVQVSPLAQFDGFQH
ELHTYLQQHYPQMLADALASAGNIHNSKVVALRQGFKEATLASGFVKLMNADFSARCERITSVDIEKFFITTQSSSPQFE
AMLWLKTEQCH
>Mature_171_residues
MKRYFTAVLFALFSEVALFSEVTVAEPLKWQTRLADHDAMIFASSTGVDSLKDAIAAVPKSVWIRSVQVSPLAQFDGFQH
ELHTYLQQHYPQMLADALASAGNIHNSKVVALRQGFKEATLASGFVKLMNADFSARCERITSVDIEKFFITTQSSSPQFE
AMLWLKTEQCH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19149; Mature: 19149

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYFTAVLFALFSEVALFSEVTVAEPLKWQTRLADHDAMIFASSTGVDSLKDAIAAVPK
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCH
SVWIRSVQVSPLAQFDGFQHELHTYLQQHYPQMLADALASAGNIHNSKVVALRQGFKEAT
HHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHH
LASGFVKLMNADFSARCERITSVDIEKFFITTQSSSPQFEAMLWLKTEQCH
HHHHHHHHHCCCHHHHHHHHHHCCHHHEEEEECCCCCCEEEEEEEECCCCC
>Mature Secondary Structure
MKRYFTAVLFALFSEVALFSEVTVAEPLKWQTRLADHDAMIFASSTGVDSLKDAIAAVPK
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCH
SVWIRSVQVSPLAQFDGFQHELHTYLQQHYPQMLADALASAGNIHNSKVVALRQGFKEAT
HHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHH
LASGFVKLMNADFSARCERITSVDIEKFFITTQSSSPQFEAMLWLKTEQCH
HHHHHHHHHCCCHHHHHHHHHHCCHHHEEEEECCCCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA