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The map label for this gene is pqiA [H]

Identifier: 117920364

GI number: 117920364

Start: 2280935

End: 2282218

Strand: Direct

Name: pqiA [H]

Synonym: Shewana3_1919

Alternate gene names: 117920364

Gene position: 2280935-2282218 (Clockwise)

Preceding gene: 117920363

Following gene: 117920365

Centisome position: 45.87

GC content: 50.31

Gene sequence:

>1284_bases
GTGTCACAGAACATTTATTCCCGCCATGATGGCGTGTTACAGGCCTGTGAGGAGTGTGGTTTAGTCACGCCTTACACCGA
GCCGAAGCCTGGCTATCGTGCCCATTGCCCAAGATGTCAGCATGGATTGCAGTCTGTGTTGGCCACTCCCTTTCAGCCGA
TTTGGGCCTATGGGGCCGCGACTTTAATCATGCTAGGACTGAGTCTGGGGTTCCCTTTCTTATCCTTTAGCGTGCAGGGC
TTATCCCAAAAGGCGAGTCTGTGGTCGGCGCTGATCAGTATGCACTATGCCAGTAACAGTCTGTTGGCCTTGGTGATCTT
ACTGTGTGTGGTGATCTTGCCACTGATTTATATCAGTTTTTCAATGCTGATTTATCGACAGGCCTATTTAGTCCAGCAAG
GGAGAACGATTGAACTGAGCTGGCTTAAACGCGCTAGCAAGTGGGTATTTCGTTTTGAGTCTTGGTTGATGGCGGATGTG
TTCCTTGTGGGTATCTTAGTCGCCATGGTGAAAATTCTGTCGCTGGCAGAAGTCGGCTTTGGACCGTCTTTCTGGGCGTT
TTGCATTTATACCTTGCTGCTAGTGAAGTTTGTCAGCCTAGTCGACAGCTCATGGGTATGGGATAAATTAACGCCGAGAG
TCGCAACGCCGTACGTGAGTGTGGGTGAGTCGCACCTGCAACAGAATCATGGCGTTTGCCCTATTTGTGGTCAGTTAAAT
GCCATCGATGCGACTGAATGCAGCCGCTGCGCGGGCGCTGTGCACAAGTACTTACCCGCAAACAGCATGCAAGCCGCGTG
GGCATTTTTGCTGGCGGCAACGGTGTTTTATATTCCGGCAAACTTCTATCCGATTATGTACACCACTAGTGTGGGCCAAA
CCGAGGCATCAACCATTATCAGTGGTGTCGTGCTGCTATGGCATTTGGGCTCTTACCCTGTGGCCTCAATTATCTTCTTC
GCCAGCATAGTGATCCCCACGGCCAAAATCGCTTCTCTAGCGTATTTGTTCCGCCAAGCGGGTAAAGCTCACTCATCAGA
CCAAGCCATTAAAAATCAACAGCTATACCGAGTGACTGAATTTATTGGTCGTTGGTCGATGATTGATATTTTTGTGGTGG
CCTTACTCACGGCACTGGTACAGCTCGATGAACTAATGGCGATTAAACCCGGCCCAGCGGCACTGTCCTTTGCCATGGTG
GTGATCTTAACCATGCTGTCAGCAATCGCCTTTGATTCTCGCGTGCTGTGGCGACAATCCAGCACCACCAACTGCGAAAA
ATGA

Upstream 100 bases:

>100_bases
TTGCCGTTAGGTGGTACTACAGCGGCAGGGGCGCCTGATTTCATGACGATTATTCGTTGCTAATAATCCTCTTTAATCGT
GACTAGAGTGAGGAGTTGCC

Downstream 100 bases:

>100_bases
CCCATTTAATATGAGTAGTAACATGATAAATAATGAAAATATCCGAGCGAAAGAGTCTAAGGTTAGACAGCTTTCGCCCG
TGTGGTTGATCCCTATGATC

Product: PqiA family integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MSQNIYSRHDGVLQACEECGLVTPYTEPKPGYRAHCPRCQHGLQSVLATPFQPIWAYGAATLIMLGLSLGFPFLSFSVQG
LSQKASLWSALISMHYASNSLLALVILLCVVILPLIYISFSMLIYRQAYLVQQGRTIELSWLKRASKWVFRFESWLMADV
FLVGILVAMVKILSLAEVGFGPSFWAFCIYTLLLVKFVSLVDSSWVWDKLTPRVATPYVSVGESHLQQNHGVCPICGQLN
AIDATECSRCAGAVHKYLPANSMQAAWAFLLAATVFYIPANFYPIMYTTSVGQTEASTIISGVVLLWHLGSYPVASIIFF
ASIVIPTAKIASLAYLFRQAGKAHSSDQAIKNQQLYRVTEFIGRWSMIDIFVVALLTALVQLDELMAIKPGPAALSFAMV
VILTMLSAIAFDSRVLWRQSSTTNCEK

Sequences:

>Translated_427_residues
MSQNIYSRHDGVLQACEECGLVTPYTEPKPGYRAHCPRCQHGLQSVLATPFQPIWAYGAATLIMLGLSLGFPFLSFSVQG
LSQKASLWSALISMHYASNSLLALVILLCVVILPLIYISFSMLIYRQAYLVQQGRTIELSWLKRASKWVFRFESWLMADV
FLVGILVAMVKILSLAEVGFGPSFWAFCIYTLLLVKFVSLVDSSWVWDKLTPRVATPYVSVGESHLQQNHGVCPICGQLN
AIDATECSRCAGAVHKYLPANSMQAAWAFLLAATVFYIPANFYPIMYTTSVGQTEASTIISGVVLLWHLGSYPVASIIFF
ASIVIPTAKIASLAYLFRQAGKAHSSDQAIKNQQLYRVTEFIGRWSMIDIFVVALLTALVQLDELMAIKPGPAALSFAMV
VILTMLSAIAFDSRVLWRQSSTTNCEK
>Mature_426_residues
SQNIYSRHDGVLQACEECGLVTPYTEPKPGYRAHCPRCQHGLQSVLATPFQPIWAYGAATLIMLGLSLGFPFLSFSVQGL
SQKASLWSALISMHYASNSLLALVILLCVVILPLIYISFSMLIYRQAYLVQQGRTIELSWLKRASKWVFRFESWLMADVF
LVGILVAMVKILSLAEVGFGPSFWAFCIYTLLLVKFVSLVDSSWVWDKLTPRVATPYVSVGESHLQQNHGVCPICGQLNA
IDATECSRCAGAVHKYLPANSMQAAWAFLLAATVFYIPANFYPIMYTTSVGQTEASTIISGVVLLWHLGSYPVASIIFFA
SIVIPTAKIASLAYLFRQAGKAHSSDQAIKNQQLYRVTEFIGRWSMIDIFVVALLTALVQLDELMAIKPGPAALSFAMVV
ILTMLSAIAFDSRVLWRQSSTTNCEK

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1787183, Length=419, Percent_Identity=36.0381861575179, Blast_Score=240, Evalue=1e-64,
Organism=Escherichia coli, GI1788137, Length=419, Percent_Identity=27.6849642004773, Blast_Score=155, Evalue=4e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 47215; Mature: 47084

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCC
>Mature Secondary Structure 
SQNIYSRHDGVLQACEECGLVTPYTEPKPGYRAHCPRCQHGLQSVLATPFQPIWAYGAA
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
TLIMLGLSLGFPFLSFSVQGLSQKASLWSALISMHYASNSLLALVILLCVVILPLIYISF
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
SMLIYRQAYLVQQGRTIELSWLKRASKWVFRFESWLMADVFLVGILVAMVKILSLAEVGF
HHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GPSFWAFCIYTLLLVKFVSLVDSSWVWDKLTPRVATPYVSVGESHLQQNHGVCPICGQLN
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHCHHHHHHCCCCCCCCCCCC
AIDATECSRCAGAVHKYLPANSMQAAWAFLLAATVFYIPANFYPIMYTTSVGQTEASTII
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH
SGVVLLWHLGSYPVASIIFFASIVIPTAKIASLAYLFRQAGKAHSSDQAIKNQQLYRVTE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
FIGRWSMIDIFVVALLTALVQLDELMAIKPGPAALSFAMVVILTMLSAIAFDSRVLWRQS
HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEECC
STTNCEK
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]