| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920349
Identifier: 117920349
GI number: 117920349
Start: 2261679
End: 2262101
Strand: Direct
Name: 117920349
Synonym: Shewana3_1904
Alternate gene names: NA
Gene position: 2261679-2262101 (Clockwise)
Preceding gene: 117920348
Following gene: 117920360
Centisome position: 45.49
GC content: 39.95
Gene sequence:
>423_bases ATGGTTACATTTAGACCAGCTAAGGATTTAGCAAAAGCAGCACATTTTACTCTGTCGAATATGCGGCCATATTATGCACA ATACTCTGTCGATTGGGATGAAGCTCAGATTGAGCAAATGACGCAAGAACTTGTGAACTTTGATATTTTATTTGAAGAAA AGCTTGTTGGTGTTGTTAGATTATCTTTTGACATTGAAGAGTGCTGGTTACGAGATTTGCAAGTGGATCAGAGTTACCAG AATCGTGGGATTGGCTCAATCGCTATTGCTGAGGCGGAACGTCTGGCTAAAGAGCATGGTTCTCACATTTTGAAGCTTAA AGTGTTTAAAAATAGCCCTGCCGTTCATTTGTATAAGAGACAAGGGTTTGGTTTAACAAGTGAAGATGATCGGTTTTACT ACATGAGCCGTGCCATCTCCTAA
Upstream 100 bases:
>100_bases GAATTGAAAAAAATTATAAGCCCATAATAAACTTAACAAAAACTTGAAGTTGGACGGCACTACGTGTGGTCCCTTAATTG GGCGTTAGGAGAATAGAGCG
Downstream 100 bases:
>100_bases CCATAAAATTTTATCGCCAGCCAAAAGCGCTGGCGGTGACGTCAACCCGCAGCGCGGCATTCCGCGCTAAATTGGGGCGT TAAGCCATAGATATTTTTAC
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Histone Acetyltransferase HPA2/Related Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; Acetyltransferase Putative Phage Gene
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MVTFRPAKDLAKAAHFTLSNMRPYYAQYSVDWDEAQIEQMTQELVNFDILFEEKLVGVVRLSFDIEECWLRDLQVDQSYQ NRGIGSIAIAEAERLAKEHGSHILKLKVFKNSPAVHLYKRQGFGLTSEDDRFYYMSRAIS
Sequences:
>Translated_140_residues MVTFRPAKDLAKAAHFTLSNMRPYYAQYSVDWDEAQIEQMTQELVNFDILFEEKLVGVVRLSFDIEECWLRDLQVDQSYQ NRGIGSIAIAEAERLAKEHGSHILKLKVFKNSPAVHLYKRQGFGLTSEDDRFYYMSRAIS >Mature_140_residues MVTFRPAKDLAKAAHFTLSNMRPYYAQYSVDWDEAQIEQMTQELVNFDILFEEKLVGVVRLSFDIEECWLRDLQVDQSYQ NRGIGSIAIAEAERLAKEHGSHILKLKVFKNSPAVHLYKRQGFGLTSEDDRFYYMSRAIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16286; Mature: 16286
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTFRPAKDLAKAAHFTLSNMRPYYAQYSVDWDEAQIEQMTQELVNFDILFEEKLVGVVR CCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCHHEEEHHHHEEEEE LSFDIEECWLRDLQVDQSYQNRGIGSIAIAEAERLAKEHGSHILKLKVFKNSPAVHLYKR EECCHHHHHHHHHHCCCHHHHCCCCEEHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEC QGFGLTSEDDRFYYMSRAIS CCCCCCCCCCEEEEEEECCC >Mature Secondary Structure MVTFRPAKDLAKAAHFTLSNMRPYYAQYSVDWDEAQIEQMTQELVNFDILFEEKLVGVVR CCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCHHEEEHHHHEEEEE LSFDIEECWLRDLQVDQSYQNRGIGSIAIAEAERLAKEHGSHILKLKVFKNSPAVHLYKR EECCHHHHHHHHHHCCCHHHHCCCCEEHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEC QGFGLTSEDDRFYYMSRAIS CCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA