| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920343
Identifier: 117920343
GI number: 117920343
Start: 2255007
End: 2255165
Strand: Direct
Name: 117920343
Synonym: Shewana3_1898
Alternate gene names: NA
Gene position: 2255007-2255165 (Clockwise)
Preceding gene: 117920342
Following gene: 117920344
Centisome position: 45.35
GC content: 45.28
Gene sequence:
>159_bases ATGAGTGCTAACAGCGCAGCAGAAAAATCCTTAGAACTGAAAATTTTTATCTTTTTAACCGTATTTCTCGCCCCCCTCTT ATCCGTGTTGTTGGTGAGTGGATTGGGATTTGCCATATGGTTTAGCCAAATCTTCACCGGCCCACCGGGTGCAGGTTGA
Upstream 100 bases:
>100_bases CGCTATGATCATTTCGTGGATCAAAGATGCAATTGATATACCTATAAATCCTGTATTGGTCAGAGCAATCCATCACAGGA ACGAACCTCTTGGAGGACGC
Downstream 100 bases:
>100_bases GGCCTAAAGAACAATAACAACAGCATGAATAAGCGGAGTGTCGGATGAGCAAAGAGCTTCATATCACGAGTCTAGTGGTG CAAGTCATGCCACAAAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 52; Mature: 51
Protein sequence:
>52_residues MSANSAAEKSLELKIFIFLTVFLAPLLSVLLVSGLGFAIWFSQIFTGPPGAG
Sequences:
>Translated_52_residues MSANSAAEKSLELKIFIFLTVFLAPLLSVLLVSGLGFAIWFSQIFTGPPGAG >Mature_51_residues SANSAAEKSLELKIFIFLTVFLAPLLSVLLVSGLGFAIWFSQIFTGPPGAG
Specific function: Unknown
COG id: COG4459
COG function: function code C; Periplasmic nitrate reductase system, NapE component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5472; Mature: 5340
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANSAAEKSLELKIFIFLTVFLAPLLSVLLVSGLGFAIWFSQIFTGPPGAG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SANSAAEKSLELKIFIFLTVFLAPLLSVLLVSGLGFAIWFSQIFTGPPGAG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA