Click here to switch to the map view.

The map label for this gene is 117920301

Identifier: 117920301

GI number: 117920301

Start: 2198577

End: 2198903

Strand: Reverse

Name: 117920301

Synonym: Shewana3_1856

Alternate gene names: NA

Gene position: 2198903-2198577 (Counterclockwise)

Preceding gene: 117920302

Following gene: 117920300

Centisome position: 44.22

GC content: 40.67

Gene sequence:

>327_bases
ATGCGATTAACATTAACCTTGGAAACCCTACTATCCCAACTCGGTTCTTTTTCGTGGTACTTGGATATGTACAAAGCCCT
AGATCAACCATTAAGTCCCTCAATGTCGGTATTAATCATTGACGATGAACTTGAAGAGGAGCGCGACCAACAGGATGAGC
CTCTCCACCCACAAACCCAAGGCTATCAATACTTTTTAAGCATTGCCGATTTGCAAAGCATCAAGGCTAATTTAGTGCAA
CAGCAGCCTAATGCCAGCTTACATGACATAATTCATGCAGTCAGTTATTACTATCAAAACGATGCTTATATGAATTTAGA
GAGCTAA

Upstream 100 bases:

>100_bases
AATTAACTCGCCTTAATTAACTCGCCATAATGATGCAAATGATGCAAATGATGCAAATGATGCAAATGATGCAAATGATG
CTCGCACAAAAGGATATTTC

Downstream 100 bases:

>100_bases
CCGCTTTAATTAAGTTTTATAAGATAAATTAAACCCAATTATTAAAAGATAATAAAGAATCAGCTATGGATAAAAAAGCA
AAAAGGATTTTATTCTCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MRLTLTLETLLSQLGSFSWYLDMYKALDQPLSPSMSVLIIDDELEEERDQQDEPLHPQTQGYQYFLSIADLQSIKANLVQ
QQPNASLHDIIHAVSYYYQNDAYMNLES

Sequences:

>Translated_108_residues
MRLTLTLETLLSQLGSFSWYLDMYKALDQPLSPSMSVLIIDDELEEERDQQDEPLHPQTQGYQYFLSIADLQSIKANLVQ
QQPNASLHDIIHAVSYYYQNDAYMNLES
>Mature_108_residues
MRLTLTLETLLSQLGSFSWYLDMYKALDQPLSPSMSVLIIDDELEEERDQQDEPLHPQTQGYQYFLSIADLQSIKANLVQ
QQPNASLHDIIHAVSYYYQNDAYMNLES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12531; Mature: 12531

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTLTLETLLSQLGSFSWYLDMYKALDQPLSPSMSVLIIDDELEEERDQQDEPLHPQTQ
CEEEEEHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHCCCCCCCCCCCCC
GYQYFLSIADLQSIKANLVQQQPNASLHDIIHAVSYYYQNDAYMNLES
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECC
>Mature Secondary Structure
MRLTLTLETLLSQLGSFSWYLDMYKALDQPLSPSMSVLIIDDELEEERDQQDEPLHPQTQ
CEEEEEHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHCCCCCCCCCCCCC
GYQYFLSIADLQSIKANLVQQQPNASLHDIIHAVSYYYQNDAYMNLES
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA