| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920276
Identifier: 117920276
GI number: 117920276
Start: 2166520
End: 2169438
Strand: Direct
Name: 117920276
Synonym: Shewana3_1829
Alternate gene names: NA
Gene position: 2166520-2169438 (Clockwise)
Preceding gene: 117920275
Following gene: 117920277
Centisome position: 43.57
GC content: 43.51
Gene sequence:
>2919_bases ATGACTCAACACCAACCTAAACAGCATTTACAGTCGCAAGAAACTAACTCGAATCATTCCAGCGGTGTGTGTGGTAAATC GAGCCCTAAAACAGCCACAAATTTTATTCAACATTTTAATGATGAGCTGGCCGATTTCACTGAATCTTTAGCAACTGAGC GGTTTTGGCATATTTGCCCCCTTGGTAGTAACGAACCTTGTGGACTATTCGATACCCAAATGGGCTTAAAACATCCGCCA ATTGTTACTTATCAACAGTTTTTTTCCGCGAATGCTTTTGTATTGGTCAAGGACAAACATGGGAATTCTGCAAGATTTCA TACTCAGCGCAAGCTGTTATGGTCATGGGGGCATAGCTCAAACCTGATAAAGGGTTACCTAGATACGCTTAAAATCGAAG CTGCAAAGTTTCGAATCCTTGGATTAGATAAATGGTGTGTACCTAAAACGTCCGATTTCAAACAATTTGCCCAAAGTAAC GCAAACCCTGACGTAACGGGGAAGAGAATATTAAAGCAAAACGACTGGATGACCCGAGAGTATCGAGTTGGGCTTGAAAA TTGGGATTTATATCCTACGGATTATTATGAGGGATATCTGTATGCTTGCAACTCCGCATGGCAATCCCTTAGTTTTTCTC AAATAGCTATATTTATCATTGAACATCAATGCACATTACTCACTATCGATAAACAACAAAGTGAGCTTTTTGTAGCTGAT AGAAATTGGCAAGATCTAGACCACGAGCAACTACTTATCACCCTCAATGAACAGGGGGTTTATTTACGCGGCGTTAATCA AGATCAATGTTTAACGAGTCCGATTAGTATGCTGAATGGATTAGATTGGCGACCTTGCCGTTTACCTAAACTAGAAAAGG CGAGGTTAACCGATCTCAATAAAGGCTTATGGGAATTGTGGGACTGTGACCCCGAGACACTGGCTAAGCATAAGTTGGTA GCTCGTAATCCCAAGCAGGATGTTAAATTGCACAATGTGGCAATCGATTTTGGTACGAGTAGCACTGTGGTTGCCTATTG CGACCAACATGGCGCTCGGCAGTTACTTCGCATTGGCGTGCGGGATTTTTACCAGCAACCAGAAGCCACCCACTATGAAA ACCCCACAGTATTAGAAATATTGGATTTTGAGCGCTTCAGGGCAATCTGGCAACGCCAAACTTACCGGCCAGAGCTTGAT TGGAACTGGTTACATACCTCCCATGAGGCACAGGAAAGCTTTAGAAATAACCCAGGCGATACTGGAGTGCTTGCCAGAAT TTTACCGCGTATTAAGCAGTGGGCTATGCGTTCAGATAAGCAACTGCTGCGGTTAACTGACTACCAAGGCCATGAATTGA CCCTCGCGGCATTAACAGAACGTAACCCTGTGCGTGGTCAGGCGATGGAGGTGAGCACTGCCGATCCCTTTGATCCGGTC GAGCTATATGCTTGGTATTTAGGGATGACCATCAACTGGCGTGAGCGTGGCTTGTATCTTAAATACCACCTGACGTTCCC AACAAAATATGAGCGCGCGACTAAAGATAAAATCCTTGCCAGTTTCCGCCGAGGCTTACAGCGTAGCTTGCCAAGCACGT TAGTGTCTCAAAATGAAATTTTTAGGGACTTTGAAGTAAAAGAATTGGCATCAGAGCCGGCAGCTTATGCCGCTGCGGCG TTACATCATTTAGCATCTCAAGACGCTGAGGATACTAGTGCTGTGCTTAATGGCGATAGCCGTTACATTAAACCTAAGTT AACCGATGATGGTGTTGCCTATGCGGTATTTGATTTTGGCGGTGGTACAACCGACTTTGACTTTGGTATTTGGCGCTGGG CAACGGATGTCGAGGAGGATGAAGGTTATGAGCAAGTATTTGAGTCGCTTCATTCATCGGGGGATAATTTTTTAGGTGGC GAAAACTTACTCGAACACCTTGTTTATGAGACCTTTAAAGACAATTTAGACATTTGCCGTGAATATAAGCTCCCCTTTAC TCGGCCCCTTGATGGCAAATTCTTTAGCGGCGATGAAGTTTTTGCCCAACAAACTCAAGCGGCGCAAACTAACTCTGTAT TACTCGGAACAAAGTTACGCCCATTTATGGAGAATGCTGATAGCCACCTTGAATCTCAAGTTTCCATAGATTTGCTTAAT ATGGATGGGCAGAAAGTTAAGAGTGAGATTAGTTTTGATGTTCAAAAGTTAGATGTCTTGTTATTTAATCGAATTAAAGA AGGTTTACGTGCCTTTTTAGTAGAATTAGACCATGTAGTTGAACAATTAGGTCCAAGGCCTATACATTTACTATTGGCAG GGAATGGTAGCCGGTCAAGGCATATTACCGCGTTGGTTGAGAATGAAAGTGATGAATGGGACGCATTGCTTGAAGAGGTA TTTCAAGGCAGAAGTCCAACATTAGTTATTCATCCTCCTTTGGCGGTAAACCAAGATAATTTGCATGCACCAACGGCTAA AACTGGGGTTGCACTCGGTTTGTTGCGACTTTGCCCTGGTGAGAAAGTAAAACTTATTAATAAGATTAGAACAGAAAGCC ATGATGAAGCGCCATTTCGCTATTATTTGGGCGGTATTCGTCGTGGACAATTTACGCCGCAGTTGGCCCCCTCTAGTGAT TATCAACAGTGGCAATTGTTGGGTAGTATGCCTCAGCAGGTTTTTAAGCTGTGTTACAGTGTGAGTCCGAAAGCTAAAGT GGGCATGCAAGAAGGGGATCCTGAGTTATTGATCCACAGACTTGATTTTCCTGCTGCGCCATCTGGAACGAAACTTTTTG TCCGTGCAATTCATCCCTGTATTGTAGAATTAGCAGCGGTAAGCGAAGAGGCTTTGCTTGAATCAGATATTATTAGTCGT ATGAAACTGGATCTTGAAACGGGATTGATAACCTCGTAA
Upstream 100 bases:
>100_bases GCTCATAATTGCATTTGGCCGAAACATTCGCTTTATTTAATGCAATGCTACAGTCTCTTACGAGCGTTAACTGCTAGATT CTATTACGGATAATAGCAAT
Downstream 100 bases:
>100_bases CGGTGTGTTTGATTAAAATCGTTATTTCGACATGTTATGGCTTATTTATGACCAAATTGGATCATATATAAGCCTGTTAA TAAGGTAAAGATCGTTAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 972; Mature: 971
Protein sequence:
>972_residues MTQHQPKQHLQSQETNSNHSSGVCGKSSPKTATNFIQHFNDELADFTESLATERFWHICPLGSNEPCGLFDTQMGLKHPP IVTYQQFFSANAFVLVKDKHGNSARFHTQRKLLWSWGHSSNLIKGYLDTLKIEAAKFRILGLDKWCVPKTSDFKQFAQSN ANPDVTGKRILKQNDWMTREYRVGLENWDLYPTDYYEGYLYACNSAWQSLSFSQIAIFIIEHQCTLLTIDKQQSELFVAD RNWQDLDHEQLLITLNEQGVYLRGVNQDQCLTSPISMLNGLDWRPCRLPKLEKARLTDLNKGLWELWDCDPETLAKHKLV ARNPKQDVKLHNVAIDFGTSSTVVAYCDQHGARQLLRIGVRDFYQQPEATHYENPTVLEILDFERFRAIWQRQTYRPELD WNWLHTSHEAQESFRNNPGDTGVLARILPRIKQWAMRSDKQLLRLTDYQGHELTLAALTERNPVRGQAMEVSTADPFDPV ELYAWYLGMTINWRERGLYLKYHLTFPTKYERATKDKILASFRRGLQRSLPSTLVSQNEIFRDFEVKELASEPAAYAAAA LHHLASQDAEDTSAVLNGDSRYIKPKLTDDGVAYAVFDFGGGTTDFDFGIWRWATDVEEDEGYEQVFESLHSSGDNFLGG ENLLEHLVYETFKDNLDICREYKLPFTRPLDGKFFSGDEVFAQQTQAAQTNSVLLGTKLRPFMENADSHLESQVSIDLLN MDGQKVKSEISFDVQKLDVLLFNRIKEGLRAFLVELDHVVEQLGPRPIHLLLAGNGSRSRHITALVENESDEWDALLEEV FQGRSPTLVIHPPLAVNQDNLHAPTAKTGVALGLLRLCPGEKVKLINKIRTESHDEAPFRYYLGGIRRGQFTPQLAPSSD YQQWQLLGSMPQQVFKLCYSVSPKAKVGMQEGDPELLIHRLDFPAAPSGTKLFVRAIHPCIVELAAVSEEALLESDIISR MKLDLETGLITS
Sequences:
>Translated_972_residues MTQHQPKQHLQSQETNSNHSSGVCGKSSPKTATNFIQHFNDELADFTESLATERFWHICPLGSNEPCGLFDTQMGLKHPP IVTYQQFFSANAFVLVKDKHGNSARFHTQRKLLWSWGHSSNLIKGYLDTLKIEAAKFRILGLDKWCVPKTSDFKQFAQSN ANPDVTGKRILKQNDWMTREYRVGLENWDLYPTDYYEGYLYACNSAWQSLSFSQIAIFIIEHQCTLLTIDKQQSELFVAD RNWQDLDHEQLLITLNEQGVYLRGVNQDQCLTSPISMLNGLDWRPCRLPKLEKARLTDLNKGLWELWDCDPETLAKHKLV ARNPKQDVKLHNVAIDFGTSSTVVAYCDQHGARQLLRIGVRDFYQQPEATHYENPTVLEILDFERFRAIWQRQTYRPELD WNWLHTSHEAQESFRNNPGDTGVLARILPRIKQWAMRSDKQLLRLTDYQGHELTLAALTERNPVRGQAMEVSTADPFDPV ELYAWYLGMTINWRERGLYLKYHLTFPTKYERATKDKILASFRRGLQRSLPSTLVSQNEIFRDFEVKELASEPAAYAAAA LHHLASQDAEDTSAVLNGDSRYIKPKLTDDGVAYAVFDFGGGTTDFDFGIWRWATDVEEDEGYEQVFESLHSSGDNFLGG ENLLEHLVYETFKDNLDICREYKLPFTRPLDGKFFSGDEVFAQQTQAAQTNSVLLGTKLRPFMENADSHLESQVSIDLLN MDGQKVKSEISFDVQKLDVLLFNRIKEGLRAFLVELDHVVEQLGPRPIHLLLAGNGSRSRHITALVENESDEWDALLEEV FQGRSPTLVIHPPLAVNQDNLHAPTAKTGVALGLLRLCPGEKVKLINKIRTESHDEAPFRYYLGGIRRGQFTPQLAPSSD YQQWQLLGSMPQQVFKLCYSVSPKAKVGMQEGDPELLIHRLDFPAAPSGTKLFVRAIHPCIVELAAVSEEALLESDIISR MKLDLETGLITS >Mature_971_residues TQHQPKQHLQSQETNSNHSSGVCGKSSPKTATNFIQHFNDELADFTESLATERFWHICPLGSNEPCGLFDTQMGLKHPPI VTYQQFFSANAFVLVKDKHGNSARFHTQRKLLWSWGHSSNLIKGYLDTLKIEAAKFRILGLDKWCVPKTSDFKQFAQSNA NPDVTGKRILKQNDWMTREYRVGLENWDLYPTDYYEGYLYACNSAWQSLSFSQIAIFIIEHQCTLLTIDKQQSELFVADR NWQDLDHEQLLITLNEQGVYLRGVNQDQCLTSPISMLNGLDWRPCRLPKLEKARLTDLNKGLWELWDCDPETLAKHKLVA RNPKQDVKLHNVAIDFGTSSTVVAYCDQHGARQLLRIGVRDFYQQPEATHYENPTVLEILDFERFRAIWQRQTYRPELDW NWLHTSHEAQESFRNNPGDTGVLARILPRIKQWAMRSDKQLLRLTDYQGHELTLAALTERNPVRGQAMEVSTADPFDPVE LYAWYLGMTINWRERGLYLKYHLTFPTKYERATKDKILASFRRGLQRSLPSTLVSQNEIFRDFEVKELASEPAAYAAAAL HHLASQDAEDTSAVLNGDSRYIKPKLTDDGVAYAVFDFGGGTTDFDFGIWRWATDVEEDEGYEQVFESLHSSGDNFLGGE NLLEHLVYETFKDNLDICREYKLPFTRPLDGKFFSGDEVFAQQTQAAQTNSVLLGTKLRPFMENADSHLESQVSIDLLNM DGQKVKSEISFDVQKLDVLLFNRIKEGLRAFLVELDHVVEQLGPRPIHLLLAGNGSRSRHITALVENESDEWDALLEEVF QGRSPTLVIHPPLAVNQDNLHAPTAKTGVALGLLRLCPGEKVKLINKIRTESHDEAPFRYYLGGIRRGQFTPQLAPSSDY QQWQLLGSMPQQVFKLCYSVSPKAKVGMQEGDPELLIHRLDFPAAPSGTKLFVRAIHPCIVELAAVSEEALLESDIISRM KLDLETGLITS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 110872; Mature: 110741
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQHQPKQHLQSQETNSNHSSGVCGKSSPKTATNFIQHFNDELADFTESLATERFWHICP CCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC LGSNEPCGLFDTQMGLKHPPIVTYQQFFSANAFVLVKDKHGNSARFHTQRKLLWSWGHSS CCCCCCCCCCCCCCCCCCCCEEHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHEECCCCC NLIKGYLDTLKIEAAKFRILGLDKWCVPKTSDFKQFAQSNANPDVTGKRILKQNDWMTRE CHHHHHHHHHEEEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCHH YRVGLENWDLYPTDYYEGYLYACNSAWQSLSFSQIAIFIIEHQCTLLTIDKQQSELFVAD HCCCCCCCCCCCCHHCCCEEEEECHHHHCCCCCEEEEEEEECCEEEEEEECCCCEEEEEC RNWQDLDHEQLLITLNEQGVYLRGVNQDQCLTSPISMLNGLDWRPCRLPKLEKARLTDLN CCCCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH KGLWELWDCDPETLAKHKLVARNPKQDVKLHNVAIDFGTSSTVVAYCDQHGARQLLRIGV HCHHHHHCCCHHHHHHHHHHHCCCHHCCEEEEEEEECCCCCEEEEECCCHHHHHHHHHHH RDFYQQPEATHYENPTVLEILDFERFRAIWQRQTYRPELDWNWLHTSHEAQESFRNNPGD HHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCC TGVLARILPRIKQWAMRSDKQLLRLTDYQGHELTLAALTERNPVRGQAMEVSTADPFDPV HHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCHH ELYAWYLGMTINWRERGLYLKYHLTFPTKYERATKDKILASFRRGLQRSLPSTLVSQNEI HHHHHHHCCEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRDFEVKELASEPAAYAAAALHHLASQDAEDTSAVLNGDSRYIKPKLTDDGVAYAVFDFG HHCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCEECCEECCCCCEEEEEECC GGTTDFDFGIWRWATDVEEDEGYEQVFESLHSSGDNFLGGENLLEHLVYETFKDNLDICR CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHH EYKLPFTRPLDGKFFSGDEVFAQQTQAAQTNSVLLGTKLRPFMENADSHLESQVSIDLLN HCCCCCCCCCCCCEECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHEEEEEEC MDGQKVKSEISFDVQKLDVLLFNRIKEGLRAFLVELDHVVEQLGPRPIHLLLAGNGSRSR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC HITALVENESDEWDALLEEVFQGRSPTLVIHPPLAVNQDNLHAPTAKTGVALGLLRLCPG EEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCEECCCCCCCCCHHHHHHHHHHHHCCC EKVKLINKIRTESHDEAPFRYYLGGIRRGQFTPQLAPSSDYQQWQLLGSMPQQVFKLCYS CHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC VSPKAKVGMQEGDPELLIHRLDFPAAPSGTKLFVRAIHPCIVELAAVSEEALLESDIISR CCCCHHCCCCCCCHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKLDLETGLITS HHHHHHCCCCCC >Mature Secondary Structure TQHQPKQHLQSQETNSNHSSGVCGKSSPKTATNFIQHFNDELADFTESLATERFWHICP CCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC LGSNEPCGLFDTQMGLKHPPIVTYQQFFSANAFVLVKDKHGNSARFHTQRKLLWSWGHSS CCCCCCCCCCCCCCCCCCCCEEHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHEECCCCC NLIKGYLDTLKIEAAKFRILGLDKWCVPKTSDFKQFAQSNANPDVTGKRILKQNDWMTRE CHHHHHHHHHEEEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCHH YRVGLENWDLYPTDYYEGYLYACNSAWQSLSFSQIAIFIIEHQCTLLTIDKQQSELFVAD HCCCCCCCCCCCCHHCCCEEEEECHHHHCCCCCEEEEEEEECCEEEEEEECCCCEEEEEC RNWQDLDHEQLLITLNEQGVYLRGVNQDQCLTSPISMLNGLDWRPCRLPKLEKARLTDLN CCCCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH KGLWELWDCDPETLAKHKLVARNPKQDVKLHNVAIDFGTSSTVVAYCDQHGARQLLRIGV HCHHHHHCCCHHHHHHHHHHHCCCHHCCEEEEEEEECCCCCEEEEECCCHHHHHHHHHHH RDFYQQPEATHYENPTVLEILDFERFRAIWQRQTYRPELDWNWLHTSHEAQESFRNNPGD HHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCC TGVLARILPRIKQWAMRSDKQLLRLTDYQGHELTLAALTERNPVRGQAMEVSTADPFDPV HHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCHH ELYAWYLGMTINWRERGLYLKYHLTFPTKYERATKDKILASFRRGLQRSLPSTLVSQNEI HHHHHHHCCEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRDFEVKELASEPAAYAAAALHHLASQDAEDTSAVLNGDSRYIKPKLTDDGVAYAVFDFG HHCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCEECCEECCCCCEEEEEECC GGTTDFDFGIWRWATDVEEDEGYEQVFESLHSSGDNFLGGENLLEHLVYETFKDNLDICR CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHH EYKLPFTRPLDGKFFSGDEVFAQQTQAAQTNSVLLGTKLRPFMENADSHLESQVSIDLLN HCCCCCCCCCCCCEECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHEEEEEEC MDGQKVKSEISFDVQKLDVLLFNRIKEGLRAFLVELDHVVEQLGPRPIHLLLAGNGSRSR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC HITALVENESDEWDALLEEVFQGRSPTLVIHPPLAVNQDNLHAPTAKTGVALGLLRLCPG EEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCEECCCCCCCCCHHHHHHHHHHHHCCC EKVKLINKIRTESHDEAPFRYYLGGIRRGQFTPQLAPSSDYQQWQLLGSMPQQVFKLCYS CHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC VSPKAKVGMQEGDPELLIHRLDFPAAPSGTKLFVRAIHPCIVELAAVSEEALLESDIISR CCCCHHCCCCCCCHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKLDLETGLITS HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA