Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117920269

Identifier: 117920269

GI number: 117920269

Start: 2155072

End: 2155788

Strand: Direct

Name: 117920269

Synonym: Shewana3_1822

Alternate gene names: NA

Gene position: 2155072-2155788 (Clockwise)

Preceding gene: 117920268

Following gene: 117920272

Centisome position: 43.34

GC content: 43.93

Gene sequence:

>717_bases
ATGGACGATCAACAGATCACTGAGAAAGCTACCAAAGAAGCCAAGAAAATGAAAAAAGCGGTGGCCAACAGGTTAGTTGA
TCATTTACCGCAGGAGGAATCTCCGGTATCTGTTTTTATGGCAGGCTCCCCTGGTGCAGGTAAAACAGAAACGGCCCGTG
CGATGATCCGCGCATTTGCTAATGAGCATGGTCAAGGCTTGGTGCATATTGAAAACGATGAACTGAGAAAAGAGTTTGAA
GATTATAACGGCTTGAATTCGCCGTTGTTTCAGCGCCCGGCTACACTTTTAGTGGAAGCTATACACGACAAGGCACTGAA
GAACGGTGTTAGTTTTATCTTAGACTCGACACTGTCGAGTTTTGACAAAGCAAAAGATAACATTGAGCGTTCATTGAAGA
AAAATCGCTTTGTGATGGTGATCTTTGTGTACCAAGCGCCTGAGCAAGCATGGCAGTTGGTCAAGGCGAGAGAGAAGGTA
GAAGGTCGTCGTGTGCCAGAGTCTGTGTTCGTTGAGCAATTTTTGGAGTCACAACGAGTGGTGAGTGAACTTAAACGCCA
TTTTAAAGACAAAATTAATATTACGTTCATCGAAAAAAACATTGACGGTGACAACGATAACCCCCACTTTAATGTGACTG
ACATTGACGCGTTATTGCGCAAAAAGTACAATCGCCAGTCCTTAGAAGCCATCGTTGGCCTAAATCCAGTTACATAA

Upstream 100 bases:

>100_bases
CGGCGCTTTTACCGCTGGTGACTATTACAACCATGGTGGATTAAGCCTGCAGGAGTGTTTAACGCCTGTGCTGAAAATTA
CCAATAGTTAGGATTTAGCC

Downstream 100 bases:

>100_bases
GGGGGGAAGTGATGCTATCTAAGCGTGAAAGAGTTAAATCAACAGCTTTCTCTGATTTTGTGCGTAATGCATCATCTAGA
GAGAAAAAGAAGTTCTTTGA

Product: zeta toxin family protein

Products: NA

Alternate protein names: Zeta xin Family Protein

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MDDQQITEKATKEAKKMKKAVANRLVDHLPQEESPVSVFMAGSPGAGKTETARAMIRAFANEHGQGLVHIENDELRKEFE
DYNGLNSPLFQRPATLLVEAIHDKALKNGVSFILDSTLSSFDKAKDNIERSLKKNRFVMVIFVYQAPEQAWQLVKAREKV
EGRRVPESVFVEQFLESQRVVSELKRHFKDKINITFIEKNIDGDNDNPHFNVTDIDALLRKKYNRQSLEAIVGLNPVT

Sequences:

>Translated_238_residues
MDDQQITEKATKEAKKMKKAVANRLVDHLPQEESPVSVFMAGSPGAGKTETARAMIRAFANEHGQGLVHIENDELRKEFE
DYNGLNSPLFQRPATLLVEAIHDKALKNGVSFILDSTLSSFDKAKDNIERSLKKNRFVMVIFVYQAPEQAWQLVKAREKV
EGRRVPESVFVEQFLESQRVVSELKRHFKDKINITFIEKNIDGDNDNPHFNVTDIDALLRKKYNRQSLEAIVGLNPVT
>Mature_238_residues
MDDQQITEKATKEAKKMKKAVANRLVDHLPQEESPVSVFMAGSPGAGKTETARAMIRAFANEHGQGLVHIENDELRKEFE
DYNGLNSPLFQRPATLLVEAIHDKALKNGVSFILDSTLSSFDKAKDNIERSLKKNRFVMVIFVYQAPEQAWQLVKAREKV
EGRRVPESVFVEQFLESQRVVSELKRHFKDKINITFIEKNIDGDNDNPHFNVTDIDALLRKKYNRQSLEAIVGLNPVT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27092; Mature: 27092

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDQQITEKATKEAKKMKKAVANRLVDHLPQEESPVSVFMAGSPGAGKTETARAMIRAFA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
NEHGQGLVHIENDELRKEFEDYNGLNSPLFQRPATLLVEAIHDKALKNGVSFILDSTLSS
HHCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDKAKDNIERSLKKNRFVMVIFVYQAPEQAWQLVKAREKVEGRRVPESVFVEQFLESQRV
HHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VSELKRHFKDKINITFIEKNIDGDNDNPHFNVTDIDALLRKKYNRQSLEAIVGLNPVT
HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCC
>Mature Secondary Structure
MDDQQITEKATKEAKKMKKAVANRLVDHLPQEESPVSVFMAGSPGAGKTETARAMIRAFA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
NEHGQGLVHIENDELRKEFEDYNGLNSPLFQRPATLLVEAIHDKALKNGVSFILDSTLSS
HHCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDKAKDNIERSLKKNRFVMVIFVYQAPEQAWQLVKAREKVEGRRVPESVFVEQFLESQRV
HHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VSELKRHFKDKINITFIEKNIDGDNDNPHFNVTDIDALLRKKYNRQSLEAIVGLNPVT
HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA