| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920247
Identifier: 117920247
GI number: 117920247
Start: 2127790
End: 2128197
Strand: Reverse
Name: 117920247
Synonym: Shewana3_1800
Alternate gene names: NA
Gene position: 2128197-2127790 (Counterclockwise)
Preceding gene: 117920248
Following gene: 117920246
Centisome position: 42.8
GC content: 50.0
Gene sequence:
>408_bases ATGAAAATACATCGCGAAACCATCCTGCTACTACCAGAGCGCTTTTATAAATTATTAGAACGACAACTGGCCGCACTCAA TAACCCCGACCTCAACATCATCACCTTTAACTACCGCGATCCCGAGTACAGCTATGAGAACGGCGGTTATCACCCCGTCG AAATCAACCTCTACCGCCAGGGTGAGTTTTGGTATCTCAATTACTTCACTGACTTTGCCTACTGCGGCGGGCCTTTCCCT GAGCTTGAGAAAGAAATGGAAGTGCTGTTTCAGGAGAAGCAGGTCTACAACAGCTTCTTTGGCCGTTGCTACCTCGAGCA TGCCGACAGCCTGGTACGACTGTTACTGGAGAACTTCTGCAACTCCGTCGAGATGGAGGTGTACCAGGTTCAGATCAGCG CCGACTGA
Upstream 100 bases:
>100_bases GCGCTAATCAGTCTAATTCATTGCGTCAAGCCCATATCGATAACAACCTACCCTGCCCGCAACGCCTGTCGTTCGCGGGC TTTTTGTTTTGGAGTCCACC
Downstream 100 bases:
>100_bases ACTTGGTGCCCACAAAGGTATTTTGGGCACCAAGCAACGCAGGCCCCATGCGGGTTGGCGATGGGCTGGTGCCCACATTC ATCACATAGCCAATTGAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MKIHRETILLLPERFYKLLERQLAALNNPDLNIITFNYRDPEYSYENGGYHPVEINLYRQGEFWYLNYFTDFAYCGGPFP ELEKEMEVLFQEKQVYNSFFGRCYLEHADSLVRLLLENFCNSVEMEVYQVQISAD
Sequences:
>Translated_135_residues MKIHRETILLLPERFYKLLERQLAALNNPDLNIITFNYRDPEYSYENGGYHPVEINLYRQGEFWYLNYFTDFAYCGGPFP ELEKEMEVLFQEKQVYNSFFGRCYLEHADSLVRLLLENFCNSVEMEVYQVQISAD >Mature_135_residues MKIHRETILLLPERFYKLLERQLAALNNPDLNIITFNYRDPEYSYENGGYHPVEINLYRQGEFWYLNYFTDFAYCGGPFP ELEKEMEVLFQEKQVYNSFFGRCYLEHADSLVRLLLENFCNSVEMEVYQVQISAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16222; Mature: 16222
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIHRETILLLPERFYKLLERQLAALNNPDLNIITFNYRDPEYSYENGGYHPVEINLYRQ CCCCCHHHEECHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEC GEFWYLNYFTDFAYCGGPFPELEKEMEVLFQEKQVYNSFFGRCYLEHADSLVRLLLENFC CCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NSVEMEVYQVQISAD CCCEEEEEEEEEECC >Mature Secondary Structure MKIHRETILLLPERFYKLLERQLAALNNPDLNIITFNYRDPEYSYENGGYHPVEINLYRQ CCCCCHHHEECHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEC GEFWYLNYFTDFAYCGGPFPELEKEMEVLFQEKQVYNSFFGRCYLEHADSLVRLLLENFC CCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NSVEMEVYQVQISAD CCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA