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The map label for this gene is ycbW [H]

Identifier: 117920234

GI number: 117920234

Start: 2111472

End: 2112005

Strand: Direct

Name: ycbW [H]

Synonym: Shewana3_1787

Alternate gene names: 117920234

Gene position: 2111472-2112005 (Clockwise)

Preceding gene: 117920233

Following gene: 117920236

Centisome position: 42.47

GC content: 41.76

Gene sequence:

>534_bases
ATGTTATTATTGCCACAAAAGGATTGGCACTGGAAATATAACGATTCGTATGGTGTATTAGGCGTTTCGTTAGGTGCCGA
GATAGAGTTTCTGACAGCTTATAAAGCAAAATCATTAATTCCTGATGCCTTATCAAGCATGGAATTTAATATTGCGCACG
CCAAATTTTATATGAGCTTGCTCGACAAGTTGCCGAAAACCTTATCCCTTACCGATGCTGCCATAGTGCAAATCGCCCTA
AATGCAACTGCCGCGCATTTTATGCTGACACCGCAAATGCCAAAATCATGGTTTTTTGATTGCAGCGATGTGTGCGTATT
TAGCGATGTGGGTAAAGTCTTTGAGCTTAAATGCCAAAAACAACGTGCGCTAGTCTTAGTCATCGAAAATACCCTACAAT
CCGCGTTAGTGATGTTATTATCGCCAGAATGTGTGTTATCCGGCGCTAAAACCATGACGCAATTTGAAACCATTAAGGTG
ATGCATAATCGCTTACACCCATTAAGGGTACAGCGCCATGTTGTTGCGGCATAA

Upstream 100 bases:

>100_bases
CTAAGTAATTGTTAACTAATCTGTATTTTATTATTTTTATTTTGATATTGAATAAAATATCTACTATGATGTGCGAGTGT
TCAAATAGTAGGTAAACGTT

Downstream 100 bases:

>100_bases
ATGACGGTCTAGCCAAGTCTTGGCCGTCATTATTTATTGCGAGCTATTGCCAACATAGCTTGGTATTTTTCATTATTTTC
GCACGGTTTTCCGCTTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MLLLPQKDWHWKYNDSYGVLGVSLGAEIEFLTAYKAKSLIPDALSSMEFNIAHAKFYMSLLDKLPKTLSLTDAAIVQIAL
NATAAHFMLTPQMPKSWFFDCSDVCVFSDVGKVFELKCQKQRALVLVIENTLQSALVMLLSPECVLSGAKTMTQFETIKV
MHNRLHPLRVQRHVVAA

Sequences:

>Translated_177_residues
MLLLPQKDWHWKYNDSYGVLGVSLGAEIEFLTAYKAKSLIPDALSSMEFNIAHAKFYMSLLDKLPKTLSLTDAAIVQIAL
NATAAHFMLTPQMPKSWFFDCSDVCVFSDVGKVFELKCQKQRALVLVIENTLQSALVMLLSPECVLSGAKTMTQFETIKV
MHNRLHPLRVQRHVVAA
>Mature_177_residues
MLLLPQKDWHWKYNDSYGVLGVSLGAEIEFLTAYKAKSLIPDALSSMEFNIAHAKFYMSLLDKLPKTLSLTDAAIVQIAL
NATAAHFMLTPQMPKSWFFDCSDVCVFSDVGKVFELKCQKQRALVLVIENTLQSALVMLLSPECVLSGAKTMTQFETIKV
MHNRLHPLRVQRHVVAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081807, Length=170, Percent_Identity=31.1764705882353, Blast_Score=80, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009809 [H]

Pfam domain/function: PF07126 DUF1379 [H]

EC number: NA

Molecular weight: Translated: 19874; Mature: 19874

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLPQKDWHWKYNDSYGVLGVSLGAEIEFLTAYKAKSLIPDALSSMEFNIAHAKFYMSL
CCCCCCCCCCEEECCCCCEEEEECCCCEEEEEHHHHHHHCHHHHHHCEEHHHHHHHHHHH
LDKLPKTLSLTDAAIVQIALNATAAHFMLTPQMPKSWFFDCSDVCVFSDVGKVFELKCQK
HHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHCCC
QRALVLVIENTLQSALVMLLSPECVLSGAKTMTQFETIKVMHNRLHPLRVQRHVVAA
CCEEEEEEHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCC
>Mature Secondary Structure
MLLLPQKDWHWKYNDSYGVLGVSLGAEIEFLTAYKAKSLIPDALSSMEFNIAHAKFYMSL
CCCCCCCCCCEEECCCCCEEEEECCCCEEEEEHHHHHHHCHHHHHHCEEHHHHHHHHHHH
LDKLPKTLSLTDAAIVQIALNATAAHFMLTPQMPKSWFFDCSDVCVFSDVGKVFELKCQK
HHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHCCC
QRALVLVIENTLQSALVMLLSPECVLSGAKTMTQFETIKVMHNRLHPLRVQRHVVAA
CCEEEEEEHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]