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The map label for this gene is udk [H]

Identifier: 117920209

GI number: 117920209

Start: 2077205

End: 2077843

Strand: Direct

Name: udk [H]

Synonym: Shewana3_1762

Alternate gene names: 117920209

Gene position: 2077205-2077843 (Clockwise)

Preceding gene: 117920208

Following gene: 117920210

Centisome position: 41.78

GC content: 45.7

Gene sequence:

>639_bases
ATGAATTCTCAGCAGTGTGTCATTATTGCAATTGCTGGCGCGTCAGCATCGGGCAAGAGTTTAATTGCCAAGACGATTTT
TGACGAACTTCGCCGCGATTTAGGCACAGATCAGATTGGGGTAATTAACGAAGACGCGTACTACCGCGATCAGAGTCATT
TATCCATGGATGAACGTGTGTTAACAAACTACGACCATCCCAAGGCGTTAGACCATCAGCTGCTATGCACGCACTTGCAG
TTGCTCAAGTCTGGCGAAGCTGTTGATATTCCTTGCTATAGCTATACCGAACATACGCGTATGGCCGAAACCGTAAAAAT
GACGCCGAAAAAAGTGATCATTTTAGAAGGCATTCTGCTGTTAACAGACCCTAAATTACGTGAATTGATGGATGCGAGTG
TGTTTATGGATACGCCGCTGGACATTTGCTTCCTGCGCCGTTTAACCCGCGACGTGGCTGAGCGTGGTCGTACGATGGAA
TCGGTGATTTCACAGTACAAGAAGACAGTGCGTCCTATGTTCCTGCAATTTATTGAACCTTCAAAACAATACGCTGATAT
TATCGTGCCTCGCGGCGGTAAAAACCGTATCGCGACCGATATTTTGAAGACTCGTATTCAACATCTACTGGCAAAATAA

Upstream 100 bases:

>100_bases
ATCGGGAAATTGCCCGTAAAGTGGGCGCCGAATTGGCTCTCAAACAGAGTCAAAAAACAGTTTCTATTAGCGTATCAGAT
GACGAGTAAGGTTTAAGGGT

Downstream 100 bases:

>100_bases
CGACTAAAACTCAGGGAGTAAAAGGCAAGATGCGCTTAACCGATATCGAAATTGAACAGGCCCTTGATAACGGCTCGATT
GTGATTGAACCTCGCCCAAG

Product: uridine kinase

Products: NA

Alternate protein names: Cytidine monophosphokinase; Uridine monophosphokinase [H]

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MNSQQCVIIAIAGASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERVLTNYDHPKALDHQLLCTHLQ
LLKSGEAVDIPCYSYTEHTRMAETVKMTPKKVIILEGILLLTDPKLRELMDASVFMDTPLDICFLRRLTRDVAERGRTME
SVISQYKKTVRPMFLQFIEPSKQYADIIVPRGGKNRIATDILKTRIQHLLAK

Sequences:

>Translated_212_residues
MNSQQCVIIAIAGASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERVLTNYDHPKALDHQLLCTHLQ
LLKSGEAVDIPCYSYTEHTRMAETVKMTPKKVIILEGILLLTDPKLRELMDASVFMDTPLDICFLRRLTRDVAERGRTME
SVISQYKKTVRPMFLQFIEPSKQYADIIVPRGGKNRIATDILKTRIQHLLAK
>Mature_212_residues
MNSQQCVIIAIAGASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERVLTNYDHPKALDHQLLCTHLQ
LLKSGEAVDIPCYSYTEHTRMAETVKMTPKKVIILEGILLLTDPKLRELMDASVFMDTPLDICFLRRLTRDVAERGRTME
SVISQYKKTVRPMFLQFIEPSKQYADIIVPRGGKNRIATDILKTRIQHLLAK

Specific function: Pyrimidine salvage pathway. [C]

COG id: COG0572

COG function: function code F; Uridine kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uridine kinase family [H]

Homologues:

Organism=Homo sapiens, GI57863312, Length=210, Percent_Identity=37.6190476190476, Blast_Score=155, Evalue=2e-38,
Organism=Homo sapiens, GI301129207, Length=210, Percent_Identity=37.6190476190476, Blast_Score=155, Evalue=2e-38,
Organism=Homo sapiens, GI18699734, Length=216, Percent_Identity=35.1851851851852, Blast_Score=153, Evalue=1e-37,
Organism=Homo sapiens, GI13899253, Length=214, Percent_Identity=32.2429906542056, Blast_Score=135, Evalue=3e-32,
Organism=Homo sapiens, GI209863022, Length=152, Percent_Identity=27.6315789473684, Blast_Score=79, Evalue=2e-15,
Organism=Escherichia coli, GI87082034, Length=209, Percent_Identity=71.2918660287081, Blast_Score=318, Evalue=1e-88,
Organism=Caenorhabditis elegans, GI17539894, Length=207, Percent_Identity=35.2657004830918, Blast_Score=144, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17539892, Length=207, Percent_Identity=35.2657004830918, Blast_Score=144, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI71981181, Length=215, Percent_Identity=34.4186046511628, Blast_Score=128, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6324339, Length=151, Percent_Identity=33.7748344370861, Blast_Score=108, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24649624, Length=210, Percent_Identity=37.1428571428571, Blast_Score=153, Evalue=8e-38,
Organism=Drosophila melanogaster, GI221458995, Length=209, Percent_Identity=36.8421052631579, Blast_Score=152, Evalue=2e-37,
Organism=Drosophila melanogaster, GI28573516, Length=204, Percent_Identity=36.7647058823529, Blast_Score=147, Evalue=4e-36,
Organism=Drosophila melanogaster, GI28573514, Length=204, Percent_Identity=36.7647058823529, Blast_Score=147, Evalue=4e-36,
Organism=Drosophila melanogaster, GI28573512, Length=204, Percent_Identity=36.7647058823529, Blast_Score=147, Evalue=4e-36,
Organism=Drosophila melanogaster, GI45550449, Length=204, Percent_Identity=36.7647058823529, Blast_Score=147, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006083
- InterPro:   IPR000764 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.48 [H]

Molecular weight: Translated: 24121; Mature: 24121

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSQQCVIIAIAGASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERV
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCHHHCCCHHCCHHHHH
LTNYDHPKALDHQLLCTHLQLLKSGEAVDIPCYSYTEHTRMAETVKMTPKKVIILEGILL
HHCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCE
LTDPKLRELMDASVFMDTPLDICFLRRLTRDVAERGRTMESVISQYKKTVRPMFLQFIEP
ECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
SKQYADIIVPRGGKNRIATDILKTRIQHLLAK
CHHHHCEEECCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSQQCVIIAIAGASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERV
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCHHHCCCHHCCHHHHH
LTNYDHPKALDHQLLCTHLQLLKSGEAVDIPCYSYTEHTRMAETVKMTPKKVIILEGILL
HHCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCE
LTDPKLRELMDASVFMDTPLDICFLRRLTRDVAERGRTMESVISQYKKTVRPMFLQFIEP
ECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
SKQYADIIVPRGGKNRIATDILKTRIQHLLAK
CHHHHCEEECCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA