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The map label for this gene is clpS [H]

Identifier: 117920199

GI number: 117920199

Start: 2066659

End: 2066967

Strand: Direct

Name: clpS [H]

Synonym: Shewana3_1752

Alternate gene names: 117920199

Gene position: 2066659-2066967 (Clockwise)

Preceding gene: 117920197

Following gene: 117920200

Centisome position: 41.56

GC content: 41.75

Gene sequence:

>309_bases
ATGGGTAAGACAGGAAACATAGAACACGTTGAAGAGCGTGTGGAATCTGAGTTAATGCCACCTTCGATGTATAAGGTGAT
CCTCAATAATGACGATTACACTCCAATGGATTTTGTGATCGAAGTGCTGCAAATCTTCTTTCGCAAGAATGAGCAGGAAG
CCACAGATATCATGTTGACTATTCATCACCAGGGAAAGGGTATCTGCGGGATTTTCCCCTACGGCATTGCAGAAACTAAG
GTGATACAAGTAAATCAATTTGCAAGACAAAACCAACATCCGTTACTGTGTTCGTTAGAGAAGGCTTAA

Upstream 100 bases:

>100_bases
GTAAAAGCGGAAGTCAAGCTAAAATTAACAAAGAGGTAACAACTAATTAATTTGAAGATAGCAATTGGAAGAGGCCAACA
CGAGAGGCTAGTATTAAAAA

Downstream 100 bases:

>100_bases
CCGCGCTTACTCTGTTGTCAGTTGTTAATTTTGGGGGTGCTTATGCTGAACAAAGATCTGGAAGTCACCTTAAATCTGGC
GTTTCAGCAAGCCAGAGAGG

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MGKTGNIEHVEERVESELMPPSMYKVILNNDDYTPMDFVIEVLQIFFRKNEQEATDIMLTIHHQGKGICGIFPYGIAETK
VIQVNQFARQNQHPLLCSLEKA

Sequences:

>Translated_102_residues
MGKTGNIEHVEERVESELMPPSMYKVILNNDDYTPMDFVIEVLQIFFRKNEQEATDIMLTIHHQGKGICGIFPYGIAETK
VIQVNQFARQNQHPLLCSLEKA
>Mature_101_residues
GKTGNIEHVEERVESELMPPSMYKVILNNDDYTPMDFVIEVLQIFFRKNEQEATDIMLTIHHQGKGICGIFPYGIAETKV
IQVNQFARQNQHPLLCSLEKA

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=106, Percent_Identity=59.4339622641509, Blast_Score=135, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 11722; Mature: 11590

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKTGNIEHVEERVESELMPPSMYKVILNNDDYTPMDFVIEVLQIFFRKNEQEATDIMLT
CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEE
IHHQGKGICGIFPYGIAETKVIQVNQFARQNQHPLLCSLEKA
EECCCCCEEEECCCCCCCEEEEEEHHHHCCCCCCEEEEECCC
>Mature Secondary Structure 
GKTGNIEHVEERVESELMPPSMYKVILNNDDYTPMDFVIEVLQIFFRKNEQEATDIMLT
CCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEE
IHHQGKGICGIFPYGIAETKVIQVNQFARQNQHPLLCSLEKA
EECCCCCEEEECCCCCCCEEEEEEHHHHCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA