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The map label for this gene is slyA [C]

Identifier: 117920186

GI number: 117920186

Start: 2050535

End: 2050966

Strand: Direct

Name: slyA [C]

Synonym: Shewana3_1739

Alternate gene names: 117920186

Gene position: 2050535-2050966 (Clockwise)

Preceding gene: 117920185

Following gene: 117920187

Centisome position: 41.24

GC content: 49.07

Gene sequence:

>432_bases
TTGAACCGCTATGAAAGCTTAGGCTATCTTGTTTCCCACTTGAATATTGAGCTGCAAAATGAGCTCGATATACAGCTGAA
ACGCTATCAGCTCGACATTAAGTTGTGGCCAGTGTTGTTCGCGCTTTGGCAGGAGGAGGGGATCTCTCAGACCGAGCTGT
CTAAGCGTTGCGATGTGGCCAACTATACCATGACCCGTTTGCTCGATCAGTTGCAGGTTCAGGGATTGATCACCCGTCAC
CAAGAGCTCGATAACCGCCGTGCATTCCAGATTTTCCTCACCGATGAGGCTAAAGCGCTGGAGCAGGATTTGATCCGTGA
GGCTGAGCGGGTCAATGAAAAATACCTGTCCAATCTCAGCGAAGAGGAGCGCCAGCAGTTTATGCGCTTACTCAATAAGA
TAAATCGCTTACCTTCACTCACAGAGCTGTAA

Upstream 100 bases:

>100_bases
TATTACGGGTTAAGTGATAGTATTAAAACTGACCTCGGCCAATCCTTCTCGGGTTTGGGTCAGTGTTGTTGGGGCTAAAT
GGTGTTTTCGGAGGTGCTGT

Downstream 100 bases:

>100_bases
GCTCTGCCCTTAGACAATGCTGTTTAACCGTCTCCACGCATTCGCTAACGGCGATTAAACTGCTATCACAATGTTTGTTT
TCTCAGCGTATTGGTTTGTT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator MarR Family Protein; Transcriptional Regulator MarR; Transcription Regulator Protein; Regulatory Protein MarR

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MNRYESLGYLVSHLNIELQNELDIQLKRYQLDIKLWPVLFALWQEEGISQTELSKRCDVANYTMTRLLDQLQVQGLITRH
QELDNRRAFQIFLTDEAKALEQDLIREAERVNEKYLSNLSEEERQQFMRLLNKINRLPSLTEL

Sequences:

>Translated_143_residues
MNRYESLGYLVSHLNIELQNELDIQLKRYQLDIKLWPVLFALWQEEGISQTELSKRCDVANYTMTRLLDQLQVQGLITRH
QELDNRRAFQIFLTDEAKALEQDLIREAERVNEKYLSNLSEEERQQFMRLLNKINRLPSLTEL
>Mature_143_residues
MNRYESLGYLVSHLNIELQNELDIQLKRYQLDIKLWPVLFALWQEEGISQTELSKRCDVANYTMTRLLDQLQVQGLITRH
QELDNRRAFQIFLTDEAKALEQDLIREAERVNEKYLSNLSEEERQQFMRLLNKINRLPSLTEL

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17125; Mature: 17125

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRYESLGYLVSHLNIELQNELDIQLKRYQLDIKLWPVLFALWQEEGISQTELSKRCDVA
CCCHHHHHHHHHHHCCEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHH
NYTMTRLLDQLQVQGLITRHQELDNRRAFQIFLTDEAKALEQDLIREAERVNEKYLSNLS
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
EEERQQFMRLLNKINRLPSLTEL
HHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNRYESLGYLVSHLNIELQNELDIQLKRYQLDIKLWPVLFALWQEEGISQTELSKRCDVA
CCCHHHHHHHHHHHCCEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHH
NYTMTRLLDQLQVQGLITRHQELDNRRAFQIFLTDEAKALEQDLIREAERVNEKYLSNLS
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
EEERQQFMRLLNKINRLPSLTEL
HHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA