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The map label for this gene is ydiA [C]

Identifier: 117920182

GI number: 117920182

Start: 2043372

End: 2044184

Strand: Reverse

Name: ydiA [C]

Synonym: Shewana3_1735

Alternate gene names: 117920182

Gene position: 2044184-2043372 (Counterclockwise)

Preceding gene: 117920188

Following gene: 117920181

Centisome position: 41.11

GC content: 44.03

Gene sequence:

>813_bases
ATGGCACCAAAGGTATTTTACATCTCCGACGGGACAGCGATCACAGCTGAGGTTTTTGGGCATGCAGTACTCTCGCAATT
TCCATTAGAATTTGAGTCACTTACAATTCCATTTGTTGAAACATTGGCAAAAGCCGAGAACGTTAAACGACAAATTAATG
ATTGTTTTATTACAACAGGTGAAAGGCCGTTAGTGTTCCATTCGATCGTAAAACCTGAAATTCGGGACATTATTTATTCG
AGTGAAGGACTCGATTACGATTTTTTAAATACCTTCGTTGCACCACTTGAACAACATTTAGGCGTTAGCGCCTCTCCGGT
GTTACATCGCACCCACGGGAAAGCCAATCACGGCTACGAAGCCCGTATCGATGCCATCAATTTTGCGATGGACAATGACG
ATGGCCAAACCATGAAACATATGGATCAGGCGGATTTAATCCTGCTTGGCGTGTCACGCTGCGGTAAAACACCGTCCAGC
CTCTATTTATCGATGCAGTTTGGTATTAAAGCGGCTAACTATCCCTTCACCGAAGACGATATGGATAACCTGAAACTACC
TGAAGCGTTAAAACGCAATAAGAAGAAGTTGTTCGGCTTAACCATCGATCCGGTGCGCTTACATGAAATCCGCCAAAGCC
GCATGGAAAACAGCCGCTACTCGTCCTTAAAGCAGTGTCGTTTAGAGGTAAAAGAAGTCGAGATGATGTTTAAACGTGAA
CGTATTCCTTATATCGACACCACCAACCACTCGGTCGAAGAAATCGCCACTAAGATTTTGGATGTGACAGGCTTAGAACG
CCATATGTTCTAA

Upstream 100 bases:

>100_bases
CAGTGGCCCCTTCACACGAGGGCAGCGGCATTTTACACTCCCGCCGAAGCAGCGTAAATCTATAATTTTATTTGTAATTT
TATTACTACAAGAGGTCAGT

Downstream 100 bases:

>100_bases
TCTTGATGATTTCGAACGAGGCAATCGAGTCCCTCGATTTAGGCTAAATAGGTCTAACTTAAATCAAATTCATTGCACAG
TTGCCGACAATTAACACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MAPKVFYISDGTAITAEVFGHAVLSQFPLEFESLTIPFVETLAKAENVKRQINDCFITTGERPLVFHSIVKPEIRDIIYS
SEGLDYDFLNTFVAPLEQHLGVSASPVLHRTHGKANHGYEARIDAINFAMDNDDGQTMKHMDQADLILLGVSRCGKTPSS
LYLSMQFGIKAANYPFTEDDMDNLKLPEALKRNKKKLFGLTIDPVRLHEIRQSRMENSRYSSLKQCRLEVKEVEMMFKRE
RIPYIDTTNHSVEEIATKILDVTGLERHMF

Sequences:

>Translated_270_residues
MAPKVFYISDGTAITAEVFGHAVLSQFPLEFESLTIPFVETLAKAENVKRQINDCFITTGERPLVFHSIVKPEIRDIIYS
SEGLDYDFLNTFVAPLEQHLGVSASPVLHRTHGKANHGYEARIDAINFAMDNDDGQTMKHMDQADLILLGVSRCGKTPSS
LYLSMQFGIKAANYPFTEDDMDNLKLPEALKRNKKKLFGLTIDPVRLHEIRQSRMENSRYSSLKQCRLEVKEVEMMFKRE
RIPYIDTTNHSVEEIATKILDVTGLERHMF
>Mature_269_residues
APKVFYISDGTAITAEVFGHAVLSQFPLEFESLTIPFVETLAKAENVKRQINDCFITTGERPLVFHSIVKPEIRDIIYSS
EGLDYDFLNTFVAPLEQHLGVSASPVLHRTHGKANHGYEARIDAINFAMDNDDGQTMKHMDQADLILLGVSRCGKTPSSL
YLSMQFGIKAANYPFTEDDMDNLKLPEALKRNKKKLFGLTIDPVRLHEIRQSRMENSRYSSLKQCRLEVKEVEMMFKRER
IPYIDTTNHSVEEIATKILDVTGLERHMF

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family

Homologues:

Organism=Escherichia coli, GI1787995, Length=269, Percent_Identity=60.2230483271376, Blast_Score=343, Evalue=7e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1591_SHESM (Q0HJU9)

Other databases:

- EMBL:   CP000446
- RefSeq:   YP_733725.1
- STRING:   Q0HJU9
- GeneID:   4252168
- GenomeReviews:   CP000446_GR
- KEGG:   she:Shewmr4_1591
- eggNOG:   COG1806
- HOGENOM:   HBG304855
- OMA:   DAINYAM
- ProtClustDB:   PRK05339
- HAMAP:   MF_01062
- InterPro:   IPR005177

Pfam domain/function: PF03618 DUF299

EC number: NA

Molecular weight: Translated: 30773; Mature: 30641

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPKVFYISDGTAITAEVFGHAVLSQFPLEFESLTIPFVETLAKAENVKRQINDCFITTG
CCCEEEEEECCCEEHHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHHEEECC
ERPLVFHSIVKPEIRDIIYSSEGLDYDFLNTFVAPLEQHLGVSASPVLHRTHGKANHGYE
CCCCHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCE
ARIDAINFAMDNDDGQTMKHMDQADLILLGVSRCGKTPSSLYLSMQFGIKAANYPFTEDD
EEEEEEEEEEECCCCHHHHHCCCHHEEEEEHHHHCCCCHHEEEEEEECCEECCCCCCCCC
MDNLKLPEALKRNKKKLFGLTIDPVRLHEIRQSRMENSRYSSLKQCRLEVKEVEMMFKRE
CCCCCCCHHHHHCHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
RIPYIDTTNHSVEEIATKILDVTGLERHMF
CCCEEECCCCCHHHHHHHHHHHCCHHHHCC
>Mature Secondary Structure 
APKVFYISDGTAITAEVFGHAVLSQFPLEFESLTIPFVETLAKAENVKRQINDCFITTG
CCEEEEEECCCEEHHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHHEEECC
ERPLVFHSIVKPEIRDIIYSSEGLDYDFLNTFVAPLEQHLGVSASPVLHRTHGKANHGYE
CCCCHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCE
ARIDAINFAMDNDDGQTMKHMDQADLILLGVSRCGKTPSSLYLSMQFGIKAANYPFTEDD
EEEEEEEEEEECCCCHHHHHCCCHHEEEEEHHHHCCCCHHEEEEEEECCEECCCCCCCCC
MDNLKLPEALKRNKKKLFGLTIDPVRLHEIRQSRMENSRYSSLKQCRLEVKEVEMMFKRE
CCCCCCCHHHHHCHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
RIPYIDTTNHSVEEIATKILDVTGLERHMF
CCCEEECCCCCHHHHHHHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA