| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920143
Identifier: 117920143
GI number: 117920143
Start: 1994679
End: 1995053
Strand: Reverse
Name: 117920143
Synonym: Shewana3_1696
Alternate gene names: NA
Gene position: 1995053-1994679 (Counterclockwise)
Preceding gene: 117920144
Following gene: 117920138
Centisome position: 40.12
GC content: 48.0
Gene sequence:
>375_bases ATGAACATTATTGTGACCGCAAACGGCAAAGCCTATCGATTTACCCTCCTCGATAATCCAACGGCAAAGGATTTCTACGC CAGCTTACCCCTAAAGCTAACGCTTAAGGACTATGCCAATACCGAAAAAATCGCCATGCTTGAGCAAAAGCTCACCAAAG CGCAGGCCCCCAAAGGCACCAGCGCTAAGCGTGGCGATATCACCTATTATGCCCCTTGGGGTAACTTAGCTCTGTTTTAT AGGGACTATGGGTATGCCGATGGCTTAATCCCGCTCGGCACTCTTAATCAAGAGATGAGCAAAGCAATGAGTGAAGAATT TGTCGAACTGCTTAGCGGCGACGATCTCGATGTGGTGTTCGATAAACAGCCCTAA
Upstream 100 bases:
>100_bases TCAATACGACAAGCCCTGAATCAAGCTTAGCGACTCTTCGCCAAAGCAAGTTAAACCAAATCAAGCTAAAAACGCCATGA CGCAATCTAAGGAGACTTCG
Downstream 100 bases:
>100_bases TCATCAAAAGCACAACATCAAAAGCAAAACATCAAAAGCAAAAAAGGCGACACTGAGTTCGCCTTTTATTTTAAATTCCG AGTACTTTCGCCAGTGATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MNIIVTANGKAYRFTLLDNPTAKDFYASLPLKLTLKDYANTEKIAMLEQKLTKAQAPKGTSAKRGDITYYAPWGNLALFY RDYGYADGLIPLGTLNQEMSKAMSEEFVELLSGDDLDVVFDKQP
Sequences:
>Translated_124_residues MNIIVTANGKAYRFTLLDNPTAKDFYASLPLKLTLKDYANTEKIAMLEQKLTKAQAPKGTSAKRGDITYYAPWGNLALFY RDYGYADGLIPLGTLNQEMSKAMSEEFVELLSGDDLDVVFDKQP >Mature_124_residues MNIIVTANGKAYRFTLLDNPTAKDFYASLPLKLTLKDYANTEKIAMLEQKLTKAQAPKGTSAKRGDITYYAPWGNLALFY RDYGYADGLIPLGTLNQEMSKAMSEEFVELLSGDDLDVVFDKQP
Specific function: Unknown
COG id: COG4925
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13853; Mature: 13853
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIIVTANGKAYRFTLLDNPTAKDFYASLPLKLTLKDYANTEKIAMLEQKLTKAQAPKGT CEEEEECCCCEEEEEEECCCCCCHHEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCC SAKRGDITYYAPWGNLALFYRDYGYADGLIPLGTLNQEMSKAMSEEFVELLSGDDLDVVF CCCCCCEEEECCCCCEEEEEECCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCEEEEE DKQP ECCC >Mature Secondary Structure MNIIVTANGKAYRFTLLDNPTAKDFYASLPLKLTLKDYANTEKIAMLEQKLTKAQAPKGT CEEEEECCCCEEEEEEECCCCCCHHEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCC SAKRGDITYYAPWGNLALFYRDYGYADGLIPLGTLNQEMSKAMSEEFVELLSGDDLDVVF CCCCCCEEEECCCCCEEEEEECCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCEEEEE DKQP ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA