Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117920143

Identifier: 117920143

GI number: 117920143

Start: 1994679

End: 1995053

Strand: Reverse

Name: 117920143

Synonym: Shewana3_1696

Alternate gene names: NA

Gene position: 1995053-1994679 (Counterclockwise)

Preceding gene: 117920144

Following gene: 117920138

Centisome position: 40.12

GC content: 48.0

Gene sequence:

>375_bases
ATGAACATTATTGTGACCGCAAACGGCAAAGCCTATCGATTTACCCTCCTCGATAATCCAACGGCAAAGGATTTCTACGC
CAGCTTACCCCTAAAGCTAACGCTTAAGGACTATGCCAATACCGAAAAAATCGCCATGCTTGAGCAAAAGCTCACCAAAG
CGCAGGCCCCCAAAGGCACCAGCGCTAAGCGTGGCGATATCACCTATTATGCCCCTTGGGGTAACTTAGCTCTGTTTTAT
AGGGACTATGGGTATGCCGATGGCTTAATCCCGCTCGGCACTCTTAATCAAGAGATGAGCAAAGCAATGAGTGAAGAATT
TGTCGAACTGCTTAGCGGCGACGATCTCGATGTGGTGTTCGATAAACAGCCCTAA

Upstream 100 bases:

>100_bases
TCAATACGACAAGCCCTGAATCAAGCTTAGCGACTCTTCGCCAAAGCAAGTTAAACCAAATCAAGCTAAAAACGCCATGA
CGCAATCTAAGGAGACTTCG

Downstream 100 bases:

>100_bases
TCATCAAAAGCACAACATCAAAAGCAAAACATCAAAAGCAAAAAAGGCGACACTGAGTTCGCCTTTTATTTTAAATTCCG
AGTACTTTCGCCAGTGATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MNIIVTANGKAYRFTLLDNPTAKDFYASLPLKLTLKDYANTEKIAMLEQKLTKAQAPKGTSAKRGDITYYAPWGNLALFY
RDYGYADGLIPLGTLNQEMSKAMSEEFVELLSGDDLDVVFDKQP

Sequences:

>Translated_124_residues
MNIIVTANGKAYRFTLLDNPTAKDFYASLPLKLTLKDYANTEKIAMLEQKLTKAQAPKGTSAKRGDITYYAPWGNLALFY
RDYGYADGLIPLGTLNQEMSKAMSEEFVELLSGDDLDVVFDKQP
>Mature_124_residues
MNIIVTANGKAYRFTLLDNPTAKDFYASLPLKLTLKDYANTEKIAMLEQKLTKAQAPKGTSAKRGDITYYAPWGNLALFY
RDYGYADGLIPLGTLNQEMSKAMSEEFVELLSGDDLDVVFDKQP

Specific function: Unknown

COG id: COG4925

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13853; Mature: 13853

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIIVTANGKAYRFTLLDNPTAKDFYASLPLKLTLKDYANTEKIAMLEQKLTKAQAPKGT
CEEEEECCCCEEEEEEECCCCCCHHEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCC
SAKRGDITYYAPWGNLALFYRDYGYADGLIPLGTLNQEMSKAMSEEFVELLSGDDLDVVF
CCCCCCEEEECCCCCEEEEEECCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCEEEEE
DKQP
ECCC
>Mature Secondary Structure
MNIIVTANGKAYRFTLLDNPTAKDFYASLPLKLTLKDYANTEKIAMLEQKLTKAQAPKGT
CEEEEECCCCEEEEEEECCCCCCHHEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCC
SAKRGDITYYAPWGNLALFYRDYGYADGLIPLGTLNQEMSKAMSEEFVELLSGDDLDVVF
CCCCCCEEEECCCCCEEEEEECCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCEEEEE
DKQP
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA