Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

Click here to switch to the map view.

The map label for this gene is 117920129

Identifier: 117920129

GI number: 117920129

Start: 1977852

End: 1978187

Strand: Direct

Name: 117920129

Synonym: Shewana3_1682

Alternate gene names: NA

Gene position: 1977852-1978187 (Clockwise)

Preceding gene: 117920128

Following gene: 117920131

Centisome position: 39.78

GC content: 44.94

Gene sequence:

>336_bases
ATGCAAGAAAATCAGACTATTCAAGAAAGCTTAACTATGCAAGAAAGCCTAATCAAGTCTGCTATCGCGACGGCGCAAGA
TGGTGTGGTGCGAGCCGATGGCCAGCTAAGTGTTACTGAGCAGATGGTTTGTTTTTCCCCTTACAATAAAACCTTAGGAC
TTGGGCCATATCAGCTGCAAAGGAAGGATATCGCCAAGGTTGAATCCTGTTGGGGTAAGGGCGGAGGCATTTTACCTGTG
ACTTCTGATGCGATAAAAATCACCTTGATTGATGGCAGCGAGTATCAATTTATTTTGGCCAGTCCCCAAGAGTGGTTGAA
TCTGCTTAGTCATTAG

Upstream 100 bases:

>100_bases
GTAGGTCGTATCGTGCACGTGAATATCCTTAAACTTGAAATCCCCACAGTGTTTGGTAAGTTGGAATAAAGCTGTTAGCA
CTATTCAATGGAGTGAAACT

Downstream 100 bases:

>100_bases
CTCTTCGACTGCTCCATAAATGCTTATTCAGTCGACATATCTTGAGCGTGTGATACCCAGATTGCTTGCTTAGACGCTTT
GCTTAGCGGCTAATTGGACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MQENQTIQESLTMQESLIKSAIATAQDGVVRADGQLSVTEQMVCFSPYNKTLGLGPYQLQRKDIAKVESCWGKGGGILPV
TSDAIKITLIDGSEYQFILASPQEWLNLLSH

Sequences:

>Translated_111_residues
MQENQTIQESLTMQESLIKSAIATAQDGVVRADGQLSVTEQMVCFSPYNKTLGLGPYQLQRKDIAKVESCWGKGGGILPV
TSDAIKITLIDGSEYQFILASPQEWLNLLSH
>Mature_111_residues
MQENQTIQESLTMQESLIKSAIATAQDGVVRADGQLSVTEQMVCFSPYNKTLGLGPYQLQRKDIAKVESCWGKGGGILPV
TSDAIKITLIDGSEYQFILASPQEWLNLLSH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12173; Mature: 12173

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQENQTIQESLTMQESLIKSAIATAQDGVVRADGQLSVTEQMVCFSPYNKTLGLGPYQLQ
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCHHHH
RKDIAKVESCWGKGGGILPVTSDAIKITLIDGSEYQFILASPQEWLNLLSH
HHHHHHHHHHHCCCCCEEEEECCEEEEEEECCCCEEEEEECHHHHHHHHCC
>Mature Secondary Structure
MQENQTIQESLTMQESLIKSAIATAQDGVVRADGQLSVTEQMVCFSPYNKTLGLGPYQLQ
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCHHHH
RKDIAKVESCWGKGGGILPVTSDAIKITLIDGSEYQFILASPQEWLNLLSH
HHHHHHHHHHHCCCCCEEEEECCEEEEEEECCCCEEEEEECHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA