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The map label for this gene is yceH [C]

Identifier: 117920069

GI number: 117920069

Start: 1909131

End: 1909787

Strand: Reverse

Name: yceH [C]

Synonym: Shewana3_1622

Alternate gene names: 117920069

Gene position: 1909787-1909131 (Counterclockwise)

Preceding gene: 117920070

Following gene: 117920068

Centisome position: 38.41

GC content: 50.68

Gene sequence:

>657_bases
ATGGAACTCACGTTACACGAAGCCAGAGTTATCGGTTGCCTACTTGAAAAAGAAGTCACCACCCCAGAGCAATACCCGCT
TTCACTCAATGCCCTGACCCTCGCCTGTAATCAAAAAACCAGCCGCGATCCCGTATTGGACTTAAGTGAGGCGCAGGTTC
AAGACGCCCTCGATTCATTGAATAAAAAGCGCTTAATCAGCGAACAATCCGGCTTTGGTAGCCGAGTCGTCAAATATAAG
CACAGATTCTGCAACACCGAATTTAGCGAGTTACAACTTTCGAGCGCTGCGGTAGCCATTGTCTGTTTGCTGCTGCTTCG
CGGCCCACAAACGCCGGGCGAATTGCGTACCCGCAGCAACAGGCTGCATGACTTTAAAGATGTGCTCGAAGTGGAAGCCT
GCATTAAGCAACTGATGGAGCGAGATAAACCCGTGCTAGCCCAACTGCCACGGGAGCCGGGTAAGCGTGAATGCCGTTAC
ACTGAGCTGTTCTCCCAAGGTGCTGAGCAAATTAGCGCCGCGTCATTCACCAGTGCCGACGCACACCCGCTAAACGAGCA
GGATAGACAACAACTGGAAGCAAGAGTCACGCAGCTTGAAGAGCAAGTGGCTGAACTTAAAGATAAGTTAGACTCACTTA
TCGCTTCTTTATCCTAA

Upstream 100 bases:

>100_bases
GTGCAAATAGTTGGCCTTAAACCTCAGTTTACCGACAAGCGCTAGGATATTAAGCATGGCTCTGTTATAACAAAGCCATG
CTTTTTTCTTTGGAGCTTAT

Downstream 100 bases:

>100_bases
CCGCGCTGCGGACGACTTTCGCGAATGGTCGCTCTTAATGATGACTAACGTGAAAGTTTGTCCGCTCACTCACTGACGAG
ACAGCGAATGACACCGAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MELTLHEARVIGCLLEKEVTTPEQYPLSLNALTLACNQKTSRDPVLDLSEAQVQDALDSLNKKRLISEQSGFGSRVVKYK
HRFCNTEFSELQLSSAAVAIVCLLLLRGPQTPGELRTRSNRLHDFKDVLEVEACIKQLMERDKPVLAQLPREPGKRECRY
TELFSQGAEQISAASFTSADAHPLNEQDRQQLEARVTQLEEQVAELKDKLDSLIASLS

Sequences:

>Translated_218_residues
MELTLHEARVIGCLLEKEVTTPEQYPLSLNALTLACNQKTSRDPVLDLSEAQVQDALDSLNKKRLISEQSGFGSRVVKYK
HRFCNTEFSELQLSSAAVAIVCLLLLRGPQTPGELRTRSNRLHDFKDVLEVEACIKQLMERDKPVLAQLPREPGKRECRY
TELFSQGAEQISAASFTSADAHPLNEQDRQQLEARVTQLEEQVAELKDKLDSLIASLS
>Mature_218_residues
MELTLHEARVIGCLLEKEVTTPEQYPLSLNALTLACNQKTSRDPVLDLSEAQVQDALDSLNKKRLISEQSGFGSRVVKYK
HRFCNTEFSELQLSSAAVAIVCLLLLRGPQTPGELRTRSNRLHDFKDVLEVEACIKQLMERDKPVLAQLPREPGKRECRY
TELFSQGAEQISAASFTSADAHPLNEQDRQQLEARVTQLEEQVAELKDKLDSLIASLS

Specific function: Unknown

COG id: COG3132

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0502 family [H]

Homologues:

Organism=Escherichia coli, GI1787306, Length=218, Percent_Identity=55.5045871559633, Blast_Score=232, Evalue=1e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007432
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04337 DUF480 [H]

EC number: NA

Molecular weight: Translated: 24477; Mature: 24477

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTLHEARVIGCLLEKEVTTPEQYPLSLNALTLACNQKTSRDPVLDLSEAQVQDALDSL
CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHH
NKKRLISEQSGFGSRVVKYKHRFCNTEFSELQLSSAAVAIVCLLLLRGPQTPGELRTRSN
HHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RLHDFKDVLEVEACIKQLMERDKPVLAQLPREPGKRECRYTELFSQGAEQISAASFTSAD
HHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
AHPLNEQDRQQLEARVTQLEEQVAELKDKLDSLIASLS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MELTLHEARVIGCLLEKEVTTPEQYPLSLNALTLACNQKTSRDPVLDLSEAQVQDALDSL
CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHH
NKKRLISEQSGFGSRVVKYKHRFCNTEFSELQLSSAAVAIVCLLLLRGPQTPGELRTRSN
HHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RLHDFKDVLEVEACIKQLMERDKPVLAQLPREPGKRECRYTELFSQGAEQISAASFTSAD
HHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
AHPLNEQDRQQLEARVTQLEEQVAELKDKLDSLIASLS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA