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The map label for this gene is dnaJ [H]

Identifier: 117920048

GI number: 117920048

Start: 1877302

End: 1877586

Strand: Reverse

Name: dnaJ [H]

Synonym: Shewana3_1600

Alternate gene names: 117920048

Gene position: 1877586-1877302 (Counterclockwise)

Preceding gene: 117920054

Following gene: 117920047

Centisome position: 37.76

GC content: 43.16

Gene sequence:

>285_bases
ATGATTAACCACTTTAGTGTGCTCGGTATCAAACCTAGCGCCAAAGAAGACGACATTAAAAAAGCCTATCGCCGGCTCTC
AAATAAATACCATCCCGATAAGTTGTTAGGTGCCTCTGATGAAGAAAAAGAGCAAGCATCACAACAACTTGAGCGCGTTA
AAAAAGCTTATGAAGTGCTCTCAGATCCCAAGCTTAGAAATGCGTTTATCCGAGACTTCAACAATGTGATCGTGACCGAT
CCCAATGGCGCGATGCGCGAATTGTGGGATCAATTTTACCCTTAA

Upstream 100 bases:

>100_bases
CTATGATCCATCGCTGACTAATCATAATTCCACAAATTGACAGATAATCAGCACTTAGCTTTTATCTTGCGATACCAACC
CATCGCCTGCAGGTACAAAT

Downstream 100 bases:

>100_bases
GCGGGTTATTTCCAGTGCAACACTGGGAGTGCCAAATTAATGAGCTTAGTTTGCCAAGCCCCTTAATTTGGACCTTTTAT
TGCAACACGGTTTATTTTGA

Product: heat shock protein DnaJ domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MINHFSVLGIKPSAKEDDIKKAYRRLSNKYHPDKLLGASDEEKEQASQQLERVKKAYEVLSDPKLRNAFIRDFNNVIVTD
PNGAMRELWDQFYP

Sequences:

>Translated_94_residues
MINHFSVLGIKPSAKEDDIKKAYRRLSNKYHPDKLLGASDEEKEQASQQLERVKKAYEVLSDPKLRNAFIRDFNNVIVTD
PNGAMRELWDQFYP
>Mature_94_residues
MINHFSVLGIKPSAKEDDIKKAYRRLSNKYHPDKLLGASDEEKEQASQQLERVKKAYEVLSDPKLRNAFIRDFNNVIVTD
PNGAMRELWDQFYP

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI23503241, Length=71, Percent_Identity=46.4788732394366, Blast_Score=65, Evalue=9e-12,
Organism=Homo sapiens, GI4885495, Length=69, Percent_Identity=46.3768115942029, Blast_Score=64, Evalue=2e-11,
Organism=Homo sapiens, GI17388799, Length=69, Percent_Identity=46.3768115942029, Blast_Score=64, Evalue=2e-11,
Organism=Homo sapiens, GI194328760, Length=66, Percent_Identity=46.969696969697, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 10968; Mature: 10968

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINHFSVLGIKPSAKEDDIKKAYRRLSNKYHPDKLLGASDEEKEQASQQLERVKKAYEVL
CCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH
SDPKLRNAFIRDFNNVIVTDPNGAMRELWDQFYP
CCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHCC
>Mature Secondary Structure
MINHFSVLGIKPSAKEDDIKKAYRRLSNKYHPDKLLGASDEEKEQASQQLERVKKAYEVL
CCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH
SDPKLRNAFIRDFNNVIVTDPNGAMRELWDQFYP
CCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA