| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117919981
Identifier: 117919981
GI number: 117919981
Start: 1785369
End: 1788104
Strand: Reverse
Name: 117919981
Synonym: Shewana3_1533
Alternate gene names: NA
Gene position: 1788104-1785369 (Counterclockwise)
Preceding gene: 117919984
Following gene: 117919980
Centisome position: 35.96
GC content: 51.83
Gene sequence:
>2736_bases ATGTTCAACAAGACGACACACCCACTGGCGAAGAAGGGCGTTAAGGCGACACCACGCCACCTTTGGCCGAGTAACTCCCA CAGGAATAAAGCTCAAAGTAAGGCGAATTGGCTGATGCCAACTGGGGTCGCCCTACTGATGGCTTTTAATCTCACGGGTT GTTTTTCTGACGATGATCCAGCACCAGAGGTCGTCACGCCCCCCGTAGTTCAGCCCCCTGAAACGGGCCCCACCTTCCCC GAAGGCGCCATCAAAATCCTTCGGGGGGATAATCTCACCACCCGTATTCAAGAAGCCTTAATCAACGCGCAAAGTGGCGC TGTGATTGTGCTACCAAAGGGCACCTTTAATATCGATTCAACATTACTGTTCGATGGCGACGTGGATGGGGATGGCAGTT ATGCCAAAAACATCACTATCATGGGCTACGGGATGAAGGACACTATCCTCAATTTCGCCCAAGCCAACTCGGGGGATGGG ATTTTCGTGCAAAATGCGCTGAACATTACCATTCAAGATATGTCGGTCAATGAGGCCAAAAACAATGGCATCAAGCTTAA AAATACCAATGGCATCATACTGCGCCGCGTGGGGGCGGTGTGGGAAGGTGAGCTCGACAAAGATAACGGCGCCTATGGTC TGTATCCCGTTGAGTGTGAAAACATTTTGATTGAAGACAGCTATGTCCGAGGAAGTGCCGATGCGGGGATTTATGTGGGC CAATCCCAATATATTGTGGTGCGCCGCAATATCGCCAAGGAGAACGTTGCCGGGATTGAAGTCGAAAACTCTAAGTATGC CGATGTGTATGACAACGAAGCCATGGGCAACACTGGCGGGATTTTAGTGTTCGACTTGCCGATCAACAACCACAGATACG GCTCTAGCGTGCGGATTTTCAACAACAAAGTGTATGACAACAACACGCCTAACTTCGCCAACGCCTCGGCCAACCCCGCA GGGGTGCATATAGTGCCGCCAGGCACAGGGGTGATTGTGCTGTCGACCGCCGATGTGGAAATCTTCAATAACGAAATTAC CCACCACGATACCTTAGGGGTGACTGTCAGCAGCTTCTTTATTGCAGAACCCGACATGACCTCCTTTGTCGGCAACTATG GGCAACCAGGTCAAGCCATTGAAGATGGCTGGCGCCCAGTGCCGCGCAATATCTACTTGCACGATAACGTGATCACTGAC TATGGCAGCAAGCCTAAAGGCTATTTAATTCAAGATATTATCCGCGCGTATGTCATCAGTCACGGCACCTTGCCCGGCGT GCTCTACGATGGCTTAGGGGAAATGCTTGCCAATAACGGCACCGCCGCTTACCTAGGTTTGAAAGAGGCACCCTTTGCCA CAGATGGCAGCGATAACGTCTGCGCCAGTGATAACGGTGATGTGTCCTACGGCAGACTCTATGCCAACAGCAACACCGAC ATCAGTATCGCTGATGTGCAATACGAGAAGACTCAGAACAACCTACTGAAATGTACCCAGGTGAGCCTACCCGTGCACAC AGTCACCTTCGCGGGCCAAGTGTTTGGCTGCGGAGTTGACGATAATACAGCGGGTTGTGATGGCGGCGTGCTCGTTGGCG GCGGAGGCACTATCGGTGAAGGCGAAGGTGGTTTAGTGGGTGATGGTGACCAAAGTCTTTGTCAGGCGACTGGGTCAAAC GTCAGTTGGGATGCGCTGCTAAAAGCAAACTGCCCTAAACTGTCGGACTACAACCTGTTCAGCGATGCCAAAAACCCTAC GACAGGGCCTAATTCGGGCGGTGTCCCTTACGATCTTAACACTCAGCTCTTTACCGACTACGCCAGTAAATACCGCTTTG TGTATTTGCCTTCGGGACAAAAAGCCAGTTACTCCGAAAACGAAGCGTTTGATTTCCCTGTGGGTAGCGTTATCGTCAAA ACCTTTGCCTTGCCAAGCAACACCAGTAAGCGCGGGATCAGTAACGAGAGTTTGATTGAAACCCGTCTGCTAATCCATCG TCCAACGGGTTGGAGCGCCCTGCCCTATGTGTGGAATGCCGATAAGACAGATGCGACGCTGGCGAAAGCCGGTGCAATTA GCAGCCAAACCTTAAGCCATAAAGGGGAAAGCCTCACCTTTAACTACATGGTCCCGAGCATGAACCAATGTAAGCAGTGT CACCAGTTTAAGGCCGATGACAACAGCAACGCCGTGTTTGTACCTATTGGTCCTAAGGCGCGCCATTTAAACCGCAACTA CAGCTATCAAGATGGCACCATGAACCAACTGCTGAAATGGGAAAGCCTAGGTATTTTGCAGGGATTACCAAATCTGAGCC AAGTACCACAAGTACCCGCCTACCACGATGGTGACGAAGCCACAGTCGCAAGCTTAAGCGATACCGCATTAATGCAAACG GCTAAGGGTTATCTCGACATCAACTGTGCCCATTGCCATAGACCCGAGGGCAACGCCTCTAACACCGGCCTTAAACTCGA GTACTGGCGTGGCTACAGCGATGATGCGGGTTTCTCCCACGGTACCTGTAAATCGCCCGTCGCCTATGGTGGTGGAAACT TAGGTTTCGACGTTGTGCCTGGCAATGCCGCAGAGTCCATCATGCACTTTAGAATGCAAAGCACGACCCCGGGCGATCGT ATGCCTGAAATTGGTCGCAGCTTATCCCATGATGAAGGCGTGGCGCTGATCAGTGAATGGATAAAACGCCTGCCCGCAGC AAGCTGCTCGCACTAG
Upstream 100 bases:
>100_bases CGCAGCGATAACTTGCACCATTTTGGCCATATTTCACATTGCCTTTTGCTGCCCCTAGCGCATTCTGTTAACGAAATAAT AACAAAAAGCAGGAGCACCT
Downstream 100 bases:
>100_bases CGTTATCGGTAACAGTGGGTGAAAGCAGGCTTGCAATCACCCACTTGCTTACCATTCCAAGACTGAGCAACACCCTGACA GAGAAGGCCGACTTAGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 911; Mature: 911
Protein sequence:
>911_residues MFNKTTHPLAKKGVKATPRHLWPSNSHRNKAQSKANWLMPTGVALLMAFNLTGCFSDDDPAPEVVTPPVVQPPETGPTFP EGAIKILRGDNLTTRIQEALINAQSGAVIVLPKGTFNIDSTLLFDGDVDGDGSYAKNITIMGYGMKDTILNFAQANSGDG IFVQNALNITIQDMSVNEAKNNGIKLKNTNGIILRRVGAVWEGELDKDNGAYGLYPVECENILIEDSYVRGSADAGIYVG QSQYIVVRRNIAKENVAGIEVENSKYADVYDNEAMGNTGGILVFDLPINNHRYGSSVRIFNNKVYDNNTPNFANASANPA GVHIVPPGTGVIVLSTADVEIFNNEITHHDTLGVTVSSFFIAEPDMTSFVGNYGQPGQAIEDGWRPVPRNIYLHDNVITD YGSKPKGYLIQDIIRAYVISHGTLPGVLYDGLGEMLANNGTAAYLGLKEAPFATDGSDNVCASDNGDVSYGRLYANSNTD ISIADVQYEKTQNNLLKCTQVSLPVHTVTFAGQVFGCGVDDNTAGCDGGVLVGGGGTIGEGEGGLVGDGDQSLCQATGSN VSWDALLKANCPKLSDYNLFSDAKNPTTGPNSGGVPYDLNTQLFTDYASKYRFVYLPSGQKASYSENEAFDFPVGSVIVK TFALPSNTSKRGISNESLIETRLLIHRPTGWSALPYVWNADKTDATLAKAGAISSQTLSHKGESLTFNYMVPSMNQCKQC HQFKADDNSNAVFVPIGPKARHLNRNYSYQDGTMNQLLKWESLGILQGLPNLSQVPQVPAYHDGDEATVASLSDTALMQT AKGYLDINCAHCHRPEGNASNTGLKLEYWRGYSDDAGFSHGTCKSPVAYGGGNLGFDVVPGNAAESIMHFRMQSTTPGDR MPEIGRSLSHDEGVALISEWIKRLPAASCSH
Sequences:
>Translated_911_residues MFNKTTHPLAKKGVKATPRHLWPSNSHRNKAQSKANWLMPTGVALLMAFNLTGCFSDDDPAPEVVTPPVVQPPETGPTFP EGAIKILRGDNLTTRIQEALINAQSGAVIVLPKGTFNIDSTLLFDGDVDGDGSYAKNITIMGYGMKDTILNFAQANSGDG IFVQNALNITIQDMSVNEAKNNGIKLKNTNGIILRRVGAVWEGELDKDNGAYGLYPVECENILIEDSYVRGSADAGIYVG QSQYIVVRRNIAKENVAGIEVENSKYADVYDNEAMGNTGGILVFDLPINNHRYGSSVRIFNNKVYDNNTPNFANASANPA GVHIVPPGTGVIVLSTADVEIFNNEITHHDTLGVTVSSFFIAEPDMTSFVGNYGQPGQAIEDGWRPVPRNIYLHDNVITD YGSKPKGYLIQDIIRAYVISHGTLPGVLYDGLGEMLANNGTAAYLGLKEAPFATDGSDNVCASDNGDVSYGRLYANSNTD ISIADVQYEKTQNNLLKCTQVSLPVHTVTFAGQVFGCGVDDNTAGCDGGVLVGGGGTIGEGEGGLVGDGDQSLCQATGSN VSWDALLKANCPKLSDYNLFSDAKNPTTGPNSGGVPYDLNTQLFTDYASKYRFVYLPSGQKASYSENEAFDFPVGSVIVK TFALPSNTSKRGISNESLIETRLLIHRPTGWSALPYVWNADKTDATLAKAGAISSQTLSHKGESLTFNYMVPSMNQCKQC HQFKADDNSNAVFVPIGPKARHLNRNYSYQDGTMNQLLKWESLGILQGLPNLSQVPQVPAYHDGDEATVASLSDTALMQT AKGYLDINCAHCHRPEGNASNTGLKLEYWRGYSDDAGFSHGTCKSPVAYGGGNLGFDVVPGNAAESIMHFRMQSTTPGDR MPEIGRSLSHDEGVALISEWIKRLPAASCSH >Mature_911_residues MFNKTTHPLAKKGVKATPRHLWPSNSHRNKAQSKANWLMPTGVALLMAFNLTGCFSDDDPAPEVVTPPVVQPPETGPTFP EGAIKILRGDNLTTRIQEALINAQSGAVIVLPKGTFNIDSTLLFDGDVDGDGSYAKNITIMGYGMKDTILNFAQANSGDG IFVQNALNITIQDMSVNEAKNNGIKLKNTNGIILRRVGAVWEGELDKDNGAYGLYPVECENILIEDSYVRGSADAGIYVG QSQYIVVRRNIAKENVAGIEVENSKYADVYDNEAMGNTGGILVFDLPINNHRYGSSVRIFNNKVYDNNTPNFANASANPA GVHIVPPGTGVIVLSTADVEIFNNEITHHDTLGVTVSSFFIAEPDMTSFVGNYGQPGQAIEDGWRPVPRNIYLHDNVITD YGSKPKGYLIQDIIRAYVISHGTLPGVLYDGLGEMLANNGTAAYLGLKEAPFATDGSDNVCASDNGDVSYGRLYANSNTD ISIADVQYEKTQNNLLKCTQVSLPVHTVTFAGQVFGCGVDDNTAGCDGGVLVGGGGTIGEGEGGLVGDGDQSLCQATGSN VSWDALLKANCPKLSDYNLFSDAKNPTTGPNSGGVPYDLNTQLFTDYASKYRFVYLPSGQKASYSENEAFDFPVGSVIVK TFALPSNTSKRGISNESLIETRLLIHRPTGWSALPYVWNADKTDATLAKAGAISSQTLSHKGESLTFNYMVPSMNQCKQC HQFKADDNSNAVFVPIGPKARHLNRNYSYQDGTMNQLLKWESLGILQGLPNLSQVPQVPAYHDGDEATVASLSDTALMQT AKGYLDINCAHCHRPEGNASNTGLKLEYWRGYSDDAGFSHGTCKSPVAYGGGNLGFDVVPGNAAESIMHFRMQSTTPGDR MPEIGRSLSHDEGVALISEWIKRLPAASCSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97938; Mature: 97938
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNKTTHPLAKKGVKATPRHLWPSNSHRNKAQSKANWLMPTGVALLMAFNLTGCFSDDDP CCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCEECCCCCC APEVVTPPVVQPPETGPTFPEGAIKILRGDNLTTRIQEALINAQSGAVIVLPKGTFNIDS CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCC TLLFDGDVDGDGSYAKNITIMGYGMKDTILNFAQANSGDGIFVQNALNITIQDMSVNEAK EEEECCCCCCCCCEECEEEEEECCHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCC NNGIKLKNTNGIILRRVGAVWEGELDKDNGAYGLYPVECENILIEDSYVRGSADAGIYVG CCCEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEEECCEECCCCCCCEEEC QSQYIVVRRNIAKENVAGIEVENSKYADVYDNEAMGNTGGILVFDLPINNHRYGSSVRIF CCCEEEEEECCCCCCCCEEEECCCEECCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEE NNKVYDNNTPNFANASANPAGVHIVPPGTGVIVLSTADVEIFNNEITHHDTLGVTVSSFF ECEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCEEEECCCCCCCCCCCEEEEEEE IAEPDMTSFVGNYGQPGQAIEDGWRPVPRNIYLHDNVITDYGSKPKGYLIQDIIRAYVIS EECCCHHHHHCCCCCCCCHHHHCCCCCCCEEEEECCEEECCCCCCCCHHHHHHHHHHHHH HGTLPGVLYDGLGEMLANNGTAAYLGLKEAPFATDGSDNVCASDNGDVSYGRLYANSNTD CCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCC ISIADVQYEKTQNNLLKCTQVSLPVHTVTFAGQVFGCGVDDNTAGCDGGVLVGGGGTIGE EEEEEEEEHHCCCCEEEEEEECCCEEEEEECCEEEECCCCCCCCCCCCCEEECCCCCCCC GEGGLVGDGDQSLCQATGSNVSWDALLKANCPKLSDYNLFSDAKNPTTGPNSGGVPYDLN CCCCEECCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC TQLFTDYASKYRFVYLPSGQKASYSENEAFDFPVGSVIVKTFALPSNTSKRGISNESLIE HHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCHHEE TRLLIHRPTGWSALPYVWNADKTDATLAKAGAISSQTLSHKGESLTFNYMVPSMNQCKQC EEEEEECCCCCCCCCEEECCCCCCCHHHHHCCCCHHHHHCCCCEEEEEEECCCHHHHHHH HQFKADDNSNAVFVPIGPKARHLNRNYSYQDGTMNQLLKWESLGILQGLPNLSQVPQVPA HHCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCC YHDGDEATVASLSDTALMQTAKGYLDINCAHCHRPEGNASNTGLKLEYWRGYSDDAGFSH CCCCCCCEEEECCHHHHHHHCCCEEEEEEHCCCCCCCCCCCCCEEEEEECCCCCCCCCCC GTCKSPVAYGGGNLGFDVVPGNAAESIMHFRMQSTTPGDRMPEIGRSLSHDEGVALISEW CCCCCCCEECCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCHHHHHHH IKRLPAASCSH HHHCCCCCCCC >Mature Secondary Structure MFNKTTHPLAKKGVKATPRHLWPSNSHRNKAQSKANWLMPTGVALLMAFNLTGCFSDDDP CCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCEECCCCCC APEVVTPPVVQPPETGPTFPEGAIKILRGDNLTTRIQEALINAQSGAVIVLPKGTFNIDS CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCC TLLFDGDVDGDGSYAKNITIMGYGMKDTILNFAQANSGDGIFVQNALNITIQDMSVNEAK EEEECCCCCCCCCEECEEEEEECCHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCC NNGIKLKNTNGIILRRVGAVWEGELDKDNGAYGLYPVECENILIEDSYVRGSADAGIYVG CCCEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEEECCEECCCCCCCEEEC QSQYIVVRRNIAKENVAGIEVENSKYADVYDNEAMGNTGGILVFDLPINNHRYGSSVRIF CCCEEEEEECCCCCCCCEEEECCCEECCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEE NNKVYDNNTPNFANASANPAGVHIVPPGTGVIVLSTADVEIFNNEITHHDTLGVTVSSFF ECEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCEEEECCCCCCCCCCCEEEEEEE IAEPDMTSFVGNYGQPGQAIEDGWRPVPRNIYLHDNVITDYGSKPKGYLIQDIIRAYVIS EECCCHHHHHCCCCCCCCHHHHCCCCCCCEEEEECCEEECCCCCCCCHHHHHHHHHHHHH HGTLPGVLYDGLGEMLANNGTAAYLGLKEAPFATDGSDNVCASDNGDVSYGRLYANSNTD CCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCC ISIADVQYEKTQNNLLKCTQVSLPVHTVTFAGQVFGCGVDDNTAGCDGGVLVGGGGTIGE EEEEEEEEHHCCCCEEEEEEECCCEEEEEECCEEEECCCCCCCCCCCCCEEECCCCCCCC GEGGLVGDGDQSLCQATGSNVSWDALLKANCPKLSDYNLFSDAKNPTTGPNSGGVPYDLN CCCCEECCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC TQLFTDYASKYRFVYLPSGQKASYSENEAFDFPVGSVIVKTFALPSNTSKRGISNESLIE HHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCHHEE TRLLIHRPTGWSALPYVWNADKTDATLAKAGAISSQTLSHKGESLTFNYMVPSMNQCKQC EEEEEECCCCCCCCCEEECCCCCCCHHHHHCCCCHHHHHCCCCEEEEEEECCCHHHHHHH HQFKADDNSNAVFVPIGPKARHLNRNYSYQDGTMNQLLKWESLGILQGLPNLSQVPQVPA HHCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCC YHDGDEATVASLSDTALMQTAKGYLDINCAHCHRPEGNASNTGLKLEYWRGYSDDAGFSH CCCCCCCEEEECCHHHHHHHCCCEEEEEEHCCCCCCCCCCCCCEEEEEECCCCCCCCCCC GTCKSPVAYGGGNLGFDVVPGNAAESIMHFRMQSTTPGDRMPEIGRSLSHDEGVALISEW CCCCCCCEECCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCHHHHHHH IKRLPAASCSH HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA