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The map label for this gene is alcA [H]

Identifier: 117919958

GI number: 117919958

Start: 1758470

End: 1759960

Strand: Reverse

Name: alcA [H]

Synonym: Shewana3_1510

Alternate gene names: 117919958

Gene position: 1759960-1758470 (Counterclockwise)

Preceding gene: 117919959

Following gene: 117919957

Centisome position: 35.4

GC content: 50.37

Gene sequence:

>1491_bases
GTGACTACCCCAAAAAAGGAAAACGATCGCAGGATTCTCGATCTACTCGGTATCGGCATAGGTCCGTTCAATCTCGGATT
AGCCGCCCTGAGTGAACCCATCGATGGCTTTAGCTGTTTGTTTCTTGATGCCAAAATCGAGTTTGACTGGCACCCGGGCA
TGCTGCTCAGCGCTTCTCGGCTGCAAACACCGTTTATGTCCGACTTAGTGACCATGGCCGATCCCACAAGTCGCTATAGT
TACCTGAATTTTGCCAAGCAAACTGGCAGGCTGTATCCCTTTTATATCCGTGAAAACTTTTTCCTGCCGCGAAATGAGTA
TAACCAGTATTGTCAATGGGTTAGCAAACAGCTCTCCAATCTGAGATTCGGTTTTAAGGTCACCCAACTAGATTACAACG
CCGGTGAAGGTATTTACCATGTTACGGGGGTTGATAGACGCAGCGGCCAGCCCCAAACCTATTTGTGCCGCAAACTGGTA
CTCGGCACGGGCACCACGCCCTACGTGCCAGACAATTGCCCGATGCACGATCCCCGCGTGATGCACAGCGCCAGCTATAT
GCAGCAGAAAACTTACCTGCAGAGCCAAAGCGCCATTACCGTGATCGGCAGTGGTCAAAGCGCGGCAGAAATCTTTTACG
ATCTGTTGCAAGATATTGATACCTATGGTTATCAATTAAATTGGATGACCCGCTCGCCACGCTTCTATCCGCTGGAATAC
ACCAAACTCACCCTAGAAATGACTTCGCCAGATTATGTGGATTACTTCCACGAACTGTCGCCAGAGAAACGCAGCCGATT
GATTGCAAATCAAAAATCCCTCTACAAGGGGATCAATGCCGAGTTAATCAACGATATTTATGATCTGCTTTACCAAAAAC
GTTTAGTCAGTGATATCCAATGCCAGCTGCTGACCAACGTGGCACTCGATAAGATAGAAACCTCGGGCGACAAGCTAACG
CTCAAATTCAACCACTTCGAACAGGAATATGCCCTCGAGCAACAGACGGGCGCCGTCGTCTTAGGCACTGGCTATCAATA
TCGTTTACCCGAATTTATTCAAGGAATTAAATCACAAATTGAATTTGATGATCGCGGCCAACTCGCCATCCAGCGGGATT
ATGGCATCGATATCAGAGGCGATATTTTCATCCAAAATGCGGGCCTGCATACCCATGGCATCAGCTCACCGGATCTGGGC
ATGGGCTGCTATCGCAATGCGACGATTCTGCAAGCGGTTTTAGGTTACGCACCCTATCCGATTGAAGACAGTATCGCCTT
CCAAACCTTCGACCCAACCAAGATCCGCGCGCAGCAAAACCAGCCCACCAGCAGCCCCCACTCAGCCATAACAGCCACAC
CAAGCAAGACGGTATCTTCGGCGGCGCAACCTACGCAGCATCGTAATGTTGAGCCACTGGCCGCGTTGCGGATAAGTCCT
TCGGGCGGCAGCGTGTCGGTGTTGATGGCACCCCACAAGGAGGCGCAGTAA

Upstream 100 bases:

>100_bases
ACTCACTCGGCTGAGATAGAGAGAACCACTCCTGGCTTGCCCATCAGCCGATGATGACAACCACAGTTTCGGTTGGCAGC
TGGAACTTAAGGAGGCGTAA

Downstream 100 bases:

>100_bases
TGGCCAGACATTGGAGTCGCCACTGTGTGGCCTCGCTCTCAACACCCATTGTGATTGATGAGTTTGTGTTTAAACCGCTC
AATCTCCCGCAACACCTAGC

Product: siderophore biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 495

Protein sequence:

>496_residues
MTTPKKENDRRILDLLGIGIGPFNLGLAALSEPIDGFSCLFLDAKIEFDWHPGMLLSASRLQTPFMSDLVTMADPTSRYS
YLNFAKQTGRLYPFYIRENFFLPRNEYNQYCQWVSKQLSNLRFGFKVTQLDYNAGEGIYHVTGVDRRSGQPQTYLCRKLV
LGTGTTPYVPDNCPMHDPRVMHSASYMQQKTYLQSQSAITVIGSGQSAAEIFYDLLQDIDTYGYQLNWMTRSPRFYPLEY
TKLTLEMTSPDYVDYFHELSPEKRSRLIANQKSLYKGINAELINDIYDLLYQKRLVSDIQCQLLTNVALDKIETSGDKLT
LKFNHFEQEYALEQQTGAVVLGTGYQYRLPEFIQGIKSQIEFDDRGQLAIQRDYGIDIRGDIFIQNAGLHTHGISSPDLG
MGCYRNATILQAVLGYAPYPIEDSIAFQTFDPTKIRAQQNQPTSSPHSAITATPSKTVSSAAQPTQHRNVEPLAALRISP
SGGSVSVLMAPHKEAQ

Sequences:

>Translated_496_residues
MTTPKKENDRRILDLLGIGIGPFNLGLAALSEPIDGFSCLFLDAKIEFDWHPGMLLSASRLQTPFMSDLVTMADPTSRYS
YLNFAKQTGRLYPFYIRENFFLPRNEYNQYCQWVSKQLSNLRFGFKVTQLDYNAGEGIYHVTGVDRRSGQPQTYLCRKLV
LGTGTTPYVPDNCPMHDPRVMHSASYMQQKTYLQSQSAITVIGSGQSAAEIFYDLLQDIDTYGYQLNWMTRSPRFYPLEY
TKLTLEMTSPDYVDYFHELSPEKRSRLIANQKSLYKGINAELINDIYDLLYQKRLVSDIQCQLLTNVALDKIETSGDKLT
LKFNHFEQEYALEQQTGAVVLGTGYQYRLPEFIQGIKSQIEFDDRGQLAIQRDYGIDIRGDIFIQNAGLHTHGISSPDLG
MGCYRNATILQAVLGYAPYPIEDSIAFQTFDPTKIRAQQNQPTSSPHSAITATPSKTVSSAAQPTQHRNVEPLAALRISP
SGGSVSVLMAPHKEAQ
>Mature_495_residues
TTPKKENDRRILDLLGIGIGPFNLGLAALSEPIDGFSCLFLDAKIEFDWHPGMLLSASRLQTPFMSDLVTMADPTSRYSY
LNFAKQTGRLYPFYIRENFFLPRNEYNQYCQWVSKQLSNLRFGFKVTQLDYNAGEGIYHVTGVDRRSGQPQTYLCRKLVL
GTGTTPYVPDNCPMHDPRVMHSASYMQQKTYLQSQSAITVIGSGQSAAEIFYDLLQDIDTYGYQLNWMTRSPRFYPLEYT
KLTLEMTSPDYVDYFHELSPEKRSRLIANQKSLYKGINAELINDIYDLLYQKRLVSDIQCQLLTNVALDKIETSGDKLTL
KFNHFEQEYALEQQTGAVVLGTGYQYRLPEFIQGIKSQIEFDDRGQLAIQRDYGIDIRGDIFIQNAGLHTHGISSPDLGM
GCYRNATILQAVLGYAPYPIEDSIAFQTFDPTKIRAQQNQPTSSPHSAITATPSKTVSSAAQPTQHRNVEPLAALRISPS
GGSVSVLMAPHKEAQ

Specific function: Unknown

COG id: COG3486

COG function: function code Q; Lysine/ornithine N-monooxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56005; Mature: 55874

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPKKENDRRILDLLGIGIGPFNLGLAALSEPIDGFSCLFLDAKIEFDWHPGMLLSASR
CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEHHH
LQTPFMSDLVTMADPTSRYSYLNFAKQTGRLYPFYIRENFFLPRNEYNQYCQWVSKQLSN
HCCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHC
LRFGFKVTQLDYNAGEGIYHVTGVDRRSGQPQTYLCRKLVLGTGTTPYVPDNCPMHDPRV
CCCCEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
MHSASYMQQKTYLQSQSAITVIGSGQSAAEIFYDLLQDIDTYGYQLNWMTRSPRFYPLEY
HHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEE
TKLTLEMTSPDYVDYFHELSPEKRSRLIANQKSLYKGINAELINDIYDLLYQKRLVSDIQ
EEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
CQLLTNVALDKIETSGDKLTLKFNHFEQEYALEQQTGAVVLGTGYQYRLPEFIQGIKSQI
HHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHC
EFDDRGQLAIQRDYGIDIRGDIFIQNAGLHTHGISSPDLGMGCYRNATILQAVLGYAPYP
CCCCCCCEEEEECCCCEEECEEEEEECCCEECCCCCCCCCCCCCCCHHHHHHHHCCCCCC
IEDSIAFQTFDPTKIRAQQNQPTSSPHSAITATPSKTVSSAAQPTQHRNVEPLAALRISP
CCCCEEEEECCCHHEEECCCCCCCCCCCEEEECCCHHHHHHCCCHHCCCCCCEEEEEECC
SGGSVSVLMAPHKEAQ
CCCCEEEEECCCCCCC
>Mature Secondary Structure 
TTPKKENDRRILDLLGIGIGPFNLGLAALSEPIDGFSCLFLDAKIEFDWHPGMLLSASR
CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEHHH
LQTPFMSDLVTMADPTSRYSYLNFAKQTGRLYPFYIRENFFLPRNEYNQYCQWVSKQLSN
HCCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHC
LRFGFKVTQLDYNAGEGIYHVTGVDRRSGQPQTYLCRKLVLGTGTTPYVPDNCPMHDPRV
CCCCEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
MHSASYMQQKTYLQSQSAITVIGSGQSAAEIFYDLLQDIDTYGYQLNWMTRSPRFYPLEY
HHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEE
TKLTLEMTSPDYVDYFHELSPEKRSRLIANQKSLYKGINAELINDIYDLLYQKRLVSDIQ
EEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
CQLLTNVALDKIETSGDKLTLKFNHFEQEYALEQQTGAVVLGTGYQYRLPEFIQGIKSQI
HHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHC
EFDDRGQLAIQRDYGIDIRGDIFIQNAGLHTHGISSPDLGMGCYRNATILQAVLGYAPYP
CCCCCCCEEEEECCCCEEECEEEEEECCCEECCCCCCCCCCCCCCCHHHHHHHHCCCCCC
IEDSIAFQTFDPTKIRAQQNQPTSSPHSAITATPSKTVSSAAQPTQHRNVEPLAALRISP
CCCCEEEEECCCHHEEECCCCCCCCCCCEEEECCCHHHHHHCCCHHCCCCCCEEEEEECC
SGGSVSVLMAPHKEAQ
CCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8566764; 12910271 [H]