| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is apr [H]
Identifier: 117919891
GI number: 117919891
Start: 1671430
End: 1673859
Strand: Reverse
Name: apr [H]
Synonym: Shewana3_1443
Alternate gene names: 117919891
Gene position: 1673859-1671430 (Counterclockwise)
Preceding gene: 117919892
Following gene: 117919880
Centisome position: 33.66
GC content: 50.99
Gene sequence:
>2430_bases ATGACAATCAATCGAACCACTAAGATAGCCCTGAGTTTATCTAGCTTAGCTATTGCGATCTCGGCAGGTGTTAATGCTGC CCCAGACGCACCAGGTTTTGCCGCAGCCAAACAAGCACAGACCTCTCCACTGCCAAAGCGCTATATCGTTAAATTTAAAA ATGCCGATGCGCCAGCCTTGATGTCTGAAAGCAGCCTGCAGAGCAGCGATCAGCTTGCCACCACAATGAATTATCAGCCT CAAGTAGCTGAAATTAGCGCCCAGCACAGTGTGCTAAACAAGGCGCAAGCCAAAGAAATGAAGCGTATCGGCCGCAGTAA CAGCTACTCAGTTAAGCTGGATAACAATGGCATTAAGGCATTAAGAGCCCGCGCCGATGTGGAATATGTGGAAGAAGACA TGCCACGCCACCTGCTAAGCGAAACAACGCCTTGGGGACAAACCTTTGTGGGTGCAACCCAATTAAGCGACAGTCAGGCC GGCAACCGTACCATCTGTATTATCGACTCTGGTTATGACCGTGGTCATAGCGACTTAAGCGGAAACAATGTCACGGGCAC CAACAACTCAGGTACAGGTAACTGGTACGAGCCAGGCAATAACAACGCCCATGGTACCCACGTTGCCGGTACTATCGCGG CGATCGCCAACAACGATGGCGTGATTGGCGTAATGCCAAATCAAAATGCCAACATCCATGTGATTAAAGTCTTTAACGAG GCTGGCTGGGGTTACTCCTCATCACTGGTGTCAGCAGTCGATACCTGTGTGGCGAATGGTGCAAACGTCGTCACCATGAG CTTAGGCGGCGCAGGTTCAAGCACTACCGAGCGTAACGCGTTAGCGGCTCACTACAATAACGGCGTACTGTTGATTGCCG CTGCCGGTAACGATGGTAACAATACCCACAGTTACCCTGCTTCGTACGATGCGGTGATGTCTGTGGCATCGGTCGATAAT CATAAAGACCACTCAGCTTTCTCTCAGTACACCAACCAAGTTGAGATCTCGGGTCCTGGTGAAGCCATTCTCTCTACCGT TACCCGCGGTGAGGGTCGCTTAGCCGATATTACTATCGGTGGTCAGTCTTACTTCAACTCAGGCGTTGTGCCGCACAATC GCTTTACGCCATCGGGCACCAACTACGCGCCCAATCCATACAATGGCACGGCAACCGCAACCTTAGCCGAATGTACGGTT AGCGGCTCAACCTTCAACTGCGGCAACATGGCTAACAAGGTGTGTTTAGTTGAGCGTGTGGGTAACCAAGGCACTTCATA CCCAGAAATCAACGCAGTAAAAGCCTGTAAGAATGCAGGTGCCAGCGCCGTTATCGTGTACAGTAACAGCGCCTTACCTG GGTTACAAAACCCCTTCTTGGTCGATGCGAACAGCGAAATCAACATGGTGTCAGTGTCTGTTGACCGTGCAACCGGTTTA GCACTGCGTAACCAGTTAGGTGCAACAGTGACCGTAAGCAACCAAGGCAATAAGGACTACGAGTACTACAACGGTACGTC GATGGCGACCCCGCACGTTTCTGGTGTGGCAACCTTAGTGTGGAGCTACCACCCAGAATGTAGCGCAGCTCAAGTACGTA ACGCGCTCAAACAAACCGCTGAAGACTTAGGCACTGCAGGCCGTGATGACTACTATGGCTATGGTCTGGTCAATGCCGTT GCAGCGAAAACCTTCTTAGATGCTTCCTGTAATGGTCCAACGGATCCGGTTGACCCTACTCCAACTGACAGCGTGTTGGT GAACGGTGTGCCAAAAACCGGTCTAAGCGGCGCCGCCAGTGAAGAACTGCATTTCTCGTTTGAAGTGCCACAGGGTGCAA CTAACTTAGGCTTTGTGATGAACGGTGGCACGGGTGATGCGGATCTGTACGTACAGTACGGCGCAGCGCCAACGACCTCA AACTACGATTGCCGTCCATATAAAGGTGGTAACAGTGAATCTTGCCCAATCAGCAACGTTCAATCTGGTACTTACTACGC GATGGTGAAAGGCTATTCAGCCTTTAGCGGTGTATCGTTAACCGCAAGCTACACAGCCCAAAGCGGTGGTGGTACTCCTA CCACGCCAGCAAGTTACACCAATGCTGATAACTACAATATTCCTGATAACAAAACCGCAGGTATCACTAGCCCTATCACA GTCACTCGCACGGGTAACTCAGGCACTGTGACTGCCGTGGTGAATATTGTTCACCCTTACATTGGTGATTTAAAAGTGCA GCTCATCAGCCCTACAGGCCAAACAGCAACACTGCATAACAACACTGGCGCAGGCGCAGACAACATCAACAAGAGCTACA CAGTTGATATGACTGGCGTGGAGTCAAGCGGTGTGTGGAAACTCAAAGCGGTTGATAGCGGCCGTGGCGACGTAGGCTAT ATCGATAGCTGGGAACTCAAATTCCAATAA
Upstream 100 bases:
>100_bases CAAAGATAAATTCACTAACCGAGTAGCATCTGAGTCGTAGTTATTCTTTAAAAGCACAAAATAATAATGATTAACACTAA ATTGAACATGGAAGAAAAAC
Downstream 100 bases:
>100_bases TCTTCGTCTAAACAAAGAGCCTGCAATTGCAGGCTCTTTTTTATTGGTCATCTTTCAGCATTTCGGGCTCGATAAGCACA CTGTGCTCATTATCCGATAA
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 809; Mature: 808
Protein sequence:
>809_residues MTINRTTKIALSLSSLAIAISAGVNAAPDAPGFAAAKQAQTSPLPKRYIVKFKNADAPALMSESSLQSSDQLATTMNYQP QVAEISAQHSVLNKAQAKEMKRIGRSNSYSVKLDNNGIKALRARADVEYVEEDMPRHLLSETTPWGQTFVGATQLSDSQA GNRTICIIDSGYDRGHSDLSGNNVTGTNNSGTGNWYEPGNNNAHGTHVAGTIAAIANNDGVIGVMPNQNANIHVIKVFNE AGWGYSSSLVSAVDTCVANGANVVTMSLGGAGSSTTERNALAAHYNNGVLLIAAAGNDGNNTHSYPASYDAVMSVASVDN HKDHSAFSQYTNQVEISGPGEAILSTVTRGEGRLADITIGGQSYFNSGVVPHNRFTPSGTNYAPNPYNGTATATLAECTV SGSTFNCGNMANKVCLVERVGNQGTSYPEINAVKACKNAGASAVIVYSNSALPGLQNPFLVDANSEINMVSVSVDRATGL ALRNQLGATVTVSNQGNKDYEYYNGTSMATPHVSGVATLVWSYHPECSAAQVRNALKQTAEDLGTAGRDDYYGYGLVNAV AAKTFLDASCNGPTDPVDPTPTDSVLVNGVPKTGLSGAASEELHFSFEVPQGATNLGFVMNGGTGDADLYVQYGAAPTTS NYDCRPYKGGNSESCPISNVQSGTYYAMVKGYSAFSGVSLTASYTAQSGGGTPTTPASYTNADNYNIPDNKTAGITSPIT VTRTGNSGTVTAVVNIVHPYIGDLKVQLISPTGQTATLHNNTGAGADNINKSYTVDMTGVESSGVWKLKAVDSGRGDVGY IDSWELKFQ
Sequences:
>Translated_809_residues MTINRTTKIALSLSSLAIAISAGVNAAPDAPGFAAAKQAQTSPLPKRYIVKFKNADAPALMSESSLQSSDQLATTMNYQP QVAEISAQHSVLNKAQAKEMKRIGRSNSYSVKLDNNGIKALRARADVEYVEEDMPRHLLSETTPWGQTFVGATQLSDSQA GNRTICIIDSGYDRGHSDLSGNNVTGTNNSGTGNWYEPGNNNAHGTHVAGTIAAIANNDGVIGVMPNQNANIHVIKVFNE AGWGYSSSLVSAVDTCVANGANVVTMSLGGAGSSTTERNALAAHYNNGVLLIAAAGNDGNNTHSYPASYDAVMSVASVDN HKDHSAFSQYTNQVEISGPGEAILSTVTRGEGRLADITIGGQSYFNSGVVPHNRFTPSGTNYAPNPYNGTATATLAECTV SGSTFNCGNMANKVCLVERVGNQGTSYPEINAVKACKNAGASAVIVYSNSALPGLQNPFLVDANSEINMVSVSVDRATGL ALRNQLGATVTVSNQGNKDYEYYNGTSMATPHVSGVATLVWSYHPECSAAQVRNALKQTAEDLGTAGRDDYYGYGLVNAV AAKTFLDASCNGPTDPVDPTPTDSVLVNGVPKTGLSGAASEELHFSFEVPQGATNLGFVMNGGTGDADLYVQYGAAPTTS NYDCRPYKGGNSESCPISNVQSGTYYAMVKGYSAFSGVSLTASYTAQSGGGTPTTPASYTNADNYNIPDNKTAGITSPIT VTRTGNSGTVTAVVNIVHPYIGDLKVQLISPTGQTATLHNNTGAGADNINKSYTVDMTGVESSGVWKLKAVDSGRGDVGY IDSWELKFQ >Mature_808_residues TINRTTKIALSLSSLAIAISAGVNAAPDAPGFAAAKQAQTSPLPKRYIVKFKNADAPALMSESSLQSSDQLATTMNYQPQ VAEISAQHSVLNKAQAKEMKRIGRSNSYSVKLDNNGIKALRARADVEYVEEDMPRHLLSETTPWGQTFVGATQLSDSQAG NRTICIIDSGYDRGHSDLSGNNVTGTNNSGTGNWYEPGNNNAHGTHVAGTIAAIANNDGVIGVMPNQNANIHVIKVFNEA GWGYSSSLVSAVDTCVANGANVVTMSLGGAGSSTTERNALAAHYNNGVLLIAAAGNDGNNTHSYPASYDAVMSVASVDNH KDHSAFSQYTNQVEISGPGEAILSTVTRGEGRLADITIGGQSYFNSGVVPHNRFTPSGTNYAPNPYNGTATATLAECTVS GSTFNCGNMANKVCLVERVGNQGTSYPEINAVKACKNAGASAVIVYSNSALPGLQNPFLVDANSEINMVSVSVDRATGLA LRNQLGATVTVSNQGNKDYEYYNGTSMATPHVSGVATLVWSYHPECSAAQVRNALKQTAEDLGTAGRDDYYGYGLVNAVA AKTFLDASCNGPTDPVDPTPTDSVLVNGVPKTGLSGAASEELHFSFEVPQGATNLGFVMNGGTGDADLYVQYGAAPTTSN YDCRPYKGGNSESCPISNVQSGTYYAMVKGYSAFSGVSLTASYTAQSGGGTPTTPASYTNADNYNIPDNKTAGITSPITV TRTGNSGTVTAVVNIVHPYIGDLKVQLISPTGQTATLHNNTGAGADNINKSYTVDMTGVESSGVWKLKAVDSGRGDVGYI DSWELKFQ
Specific function: Subtilisin is an extracellular alkaline serine protease, it catalyzes the hydrolysis of proteins and peptide amides [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 - InterPro: IPR010259 [H]
Pfam domain/function: PF05922 Inhibitor_I9; PF00082 Peptidase_S8 [H]
EC number: =3.4.21.62 [H]
Molecular weight: Translated: 84364; Mature: 84232
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTINRTTKIALSLSSLAIAISAGVNAAPDAPGFAAAKQAQTSPLPKRYIVKFKNADAPAL CCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCC MSESSLQSSDQLATTMNYQPQVAEISAQHSVLNKAQAKEMKRIGRSNSYSVKLDNNGIKA CCCHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEE LRARADVEYVEEDMPRHLLSETTPWGQTFVGATQLSDSQAGNRTICIIDSGYDRGHSDLS HHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCC GNNVTGTNNSGTGNWYEPGNNNAHGTHVAGTIAAIANNDGVIGVMPNQNANIHVIKVFNE CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEECCCCCCEEEEEEEEC AGWGYSSSLVSAVDTCVANGANVVTMSLGGAGSSTTERNALAAHYNNGVLLIAAAGNDGN CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCC NTHSYPASYDAVMSVASVDNHKDHSAFSQYTNQVEISGPGEAILSTVTRGEGRLADITIG CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCEEEECCCHHHHHHHHHCCCCEEEEEEEC GQSYFNSGVVPHNRFTPSGTNYAPNPYNGTATATLAECTVSGSTFNCGNMANKVCLVERV CHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEECCCCCCCEEEEEEC GNQGTSYPEINAVKACKNAGASAVIVYSNSALPGLQNPFLVDANSEINMVSVSVDRATGL CCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEECCCCEEEEEEEECCHHHH ALRNQLGATVTVSNQGNKDYEYYNGTSMATPHVSGVATLVWSYHPECSAAQVRNALKQTA HHHHCCCCEEEECCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH EDLGTAGRDDYYGYGLVNAVAAKTFLDASCNGPTDPVDPTPTDSVLVNGVPKTGLSGAAS HHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC EELHFSFEVPQGATNLGFVMNGGTGDADLYVQYGAAPTTSNYDCRPYKGGNSESCPISNV CCEEEEEECCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC QSGTYYAMVKGYSAFSGVSLTASYTAQSGGGTPTTPASYTNADNYNIPDNKTAGITSPIT CCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE VTRTGNSGTVTAVVNIVHPYIGDLKVQLISPTGQTATLHNNTGAGADNINKSYTVDMTGV EEEECCCCEEEEEEEEHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEECC ESSGVWKLKAVDSGRGDVGYIDSWELKFQ CCCCEEEEEEECCCCCCCCCCCCEEEEEC >Mature Secondary Structure TINRTTKIALSLSSLAIAISAGVNAAPDAPGFAAAKQAQTSPLPKRYIVKFKNADAPAL CCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCC MSESSLQSSDQLATTMNYQPQVAEISAQHSVLNKAQAKEMKRIGRSNSYSVKLDNNGIKA CCCHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEE LRARADVEYVEEDMPRHLLSETTPWGQTFVGATQLSDSQAGNRTICIIDSGYDRGHSDLS HHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCC GNNVTGTNNSGTGNWYEPGNNNAHGTHVAGTIAAIANNDGVIGVMPNQNANIHVIKVFNE CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEECCCCCCEEEEEEEEC AGWGYSSSLVSAVDTCVANGANVVTMSLGGAGSSTTERNALAAHYNNGVLLIAAAGNDGN CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCC NTHSYPASYDAVMSVASVDNHKDHSAFSQYTNQVEISGPGEAILSTVTRGEGRLADITIG CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCEEEECCCHHHHHHHHHCCCCEEEEEEEC GQSYFNSGVVPHNRFTPSGTNYAPNPYNGTATATLAECTVSGSTFNCGNMANKVCLVERV CHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEECCCCCCCEEEEEEC GNQGTSYPEINAVKACKNAGASAVIVYSNSALPGLQNPFLVDANSEINMVSVSVDRATGL CCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEECCCCEEEEEEEECCHHHH ALRNQLGATVTVSNQGNKDYEYYNGTSMATPHVSGVATLVWSYHPECSAAQVRNALKQTA HHHHCCCCEEEECCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH EDLGTAGRDDYYGYGLVNAVAAKTFLDASCNGPTDPVDPTPTDSVLVNGVPKTGLSGAAS HHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC EELHFSFEVPQGATNLGFVMNGGTGDADLYVQYGAAPTTSNYDCRPYKGGNSESCPISNV CCEEEEEECCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC QSGTYYAMVKGYSAFSGVSLTASYTAQSGGGTPTTPASYTNADNYNIPDNKTAGITSPIT CCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE VTRTGNSGTVTAVVNIVHPYIGDLKVQLISPTGQTATLHNNTGAGADNINKSYTVDMTGV EEEECCCCEEEEEEEEHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEECC ESSGVWKLKAVDSGRGDVGYIDSWELKFQ CCCCEEEEEEECCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3001653; 4967581; 8512925; 9425066 [H]