| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is cutF [C]
Identifier: 117919837
GI number: 117919837
Start: 1603920
End: 1604426
Strand: Reverse
Name: cutF [C]
Synonym: Shewana3_1389
Alternate gene names: 117919837
Gene position: 1604426-1603920 (Counterclockwise)
Preceding gene: 117919841
Following gene: 117919836
Centisome position: 32.27
GC content: 42.8
Gene sequence:
>507_bases ATGATGGCGGTTATCATCACACGACAGTCAATTAATCAAACGGTTAAGATCAATATGAAACTTTCACAGATATCACTCGC CCTTCTCGCTTTAATGATTACCGCATGCAGTGAGCCAGCTAAGACAGTGGCTAATGAGCCTGTCGCTGCGCCACATCAAG ATACGCAAACAAACCTACCACTTGGCGATACCAGCCAAAATGCGCTTGATTGGCCCGGAGTATATGAAGGCGTTATCCCC TGTGCAAGTTGCGAAGGGATCCAAACCACACTCACGCTCCAAGCGGATAATAGCTTTGAATTAAAGAGTATTTACTTGGG TAAAGATGAGTCCATCTTTAAAGTGGCAGGAAAATTTGACTGGGATAGCAATGGCTCAAAAATCACCTTATCCGATGGCA CTAAATACTTGGTAGGAGAAAACCAACTGTTTATGTTAGATATGGAAGGTAATCGGGTAAGTGGCGAACTAGCAGATCAT TACATTTTGAAGAAGAAAGAGATTTAG
Upstream 100 bases:
>100_bases TTTTTTGCTGAACTCGTAATGAAGTTCAAACACATAAAGTCCGTCTTTAACATTAAGACACTCAAAGAAACACCAGACAT AAATAAGGTTGGAACCCGTA
Downstream 100 bases:
>100_bases CTGTAAACGCAGTAGCTGCGATACGCCACTGCATTATGCGCCGAAGTAGGTATCCTCTGTACTGAAACAATCCATAATAA AAAGAGAAGCTTAAATTGAA
Product: lipoprotein
Products: NA
Alternate protein names: Copper Resistance Lipoprotein NlpE; Copper Homeostasis Protein CutF; Lipoprotein NlpE Involved In Copper Resistance
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MMAVIITRQSINQTVKINMKLSQISLALLALMITACSEPAKTVANEPVAAPHQDTQTNLPLGDTSQNALDWPGVYEGVIP CASCEGIQTTLTLQADNSFELKSIYLGKDESIFKVAGKFDWDSNGSKITLSDGTKYLVGENQLFMLDMEGNRVSGELADH YILKKKEI
Sequences:
>Translated_168_residues MMAVIITRQSINQTVKINMKLSQISLALLALMITACSEPAKTVANEPVAAPHQDTQTNLPLGDTSQNALDWPGVYEGVIP CASCEGIQTTLTLQADNSFELKSIYLGKDESIFKVAGKFDWDSNGSKITLSDGTKYLVGENQLFMLDMEGNRVSGELADH YILKKKEI >Mature_168_residues MMAVIITRQSINQTVKINMKLSQISLALLALMITACSEPAKTVANEPVAAPHQDTQTNLPLGDTSQNALDWPGVYEGVIP CASCEGIQTTLTLQADNSFELKSIYLGKDESIFKVAGKFDWDSNGSKITLSDGTKYLVGENQLFMLDMEGNRVSGELADH YILKKKEI
Specific function: Involved In Copper Homeostasis. Could Be Involved In Both Copper Efflux And The Delivery Of Copper To Copper-Dependent Enzymes. [C]
COG id: COG3015
COG function: function code MP; Uncharacterized lipoprotein NlpE involved in copper resistance
Gene ontology:
Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18355; Mature: 18355
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAVIITRQSINQTVKINMKLSQISLALLALMITACSEPAKTVANEPVAAPHQDTQTNLP CEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCC LGDTSQNALDWPGVYEGVIPCASCEGIQTTLTLQADNSFELKSIYLGKDESIFKVAGKFD CCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEECC WDSNGSKITLSDGTKYLVGENQLFMLDMEGNRVSGELADHYILKKKEI CCCCCCEEEECCCCEEEECCCEEEEEEECCCEECCCHHHHEEEEECCC >Mature Secondary Structure MMAVIITRQSINQTVKINMKLSQISLALLALMITACSEPAKTVANEPVAAPHQDTQTNLP CEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCC LGDTSQNALDWPGVYEGVIPCASCEGIQTTLTLQADNSFELKSIYLGKDESIFKVAGKFD CCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEECC WDSNGSKITLSDGTKYLVGENQLFMLDMEGNRVSGELADHYILKKKEI CCCCCCEEEECCCCEEEECCCEEEEEEECCCEECCCHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA