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The map label for this gene is fliD [H]

Identifier: 117919783

GI number: 117919783

Start: 1547975

End: 1549345

Strand: Direct

Name: fliD [H]

Synonym: Shewana3_1335

Alternate gene names: 117919783

Gene position: 1547975-1549345 (Clockwise)

Preceding gene: 117919782

Following gene: 117919784

Centisome position: 31.13

GC content: 39.61

Gene sequence:

>1371_bases
ATGGCATTAACAGCGACAGGTATTGGTTCAGGGTTAGATGTTGATAACATTGTAAAAGTATTAGTGGATGCTGAAAAAAC
TCCTAAAGAAGCAATGTTTAAAGCACAAGAAGACAGCATTAAAGCTGAGGTTTCTGCTATGGGAACCTTAAAAAGCGCAC
TGACGACATTTCAGGATGCCGTAAAAAAATTACAAACTGGCGACGCTTTAAATCAACGCAAAATATCCGTTAGTAATAGT
ACATATATAACTGCAACTGCTGATAAAACAGCTCAAACAGGTAGTTATGCTATTAAAGTTGAACAGCTCGCTGTCAATCA
TAAAATTGCTGGAACGAATGTAACTGATCCTGCATTAGGTGTTGGTGAGGGAAGTCTAGCTTTTGGGGTCAATGGTAATA
ATTTTTCCGTGGACGTATCGGCAACGGATTCTCTTGATGCGATAGCGAAAAAAGTCAATGAAGCACCCGATAATGTCGGT
GTCACTGCCACCGTTATAACCAGTGACGCCGGAAGTCGATTAGTTTTTAGTTCCGATAAATCTGGCGAAGATAACCAAAT
CAGCATCACGGCTACAGATACCACAGGCTCTGGCCTTAGCAATATGTTTGATGCAATGAATACCACAACGCTTCAAGATG
CAAAAAATGCTGTCCTCTACATTGATAATCAAAAAGTCACCTCGCAAACTAATGAAGTTAAGAATGCGATTACAGGTGTG
ACTTTACAGTTAACAGATGCTGATCTTACTAAAACCACTTCACTCAAAATAGAACAAGATAACGATGCAGTTAAAACAAA
CGTTAAGGCATTTGTTGATGCCTACAATAGCTTAGTTACAACGGTCGATAAGCTGTCATCCTACGATCAAGATACAAATA
CTGCAGCGGCATTGCAGGGCGACTCGATGATCCGTTCGATTGAATCACAACTCCGTAGTATTGCGAGCGAACGAGTGCCT
ACCGAAGATGGTGGTTCTATAGCTTTGTATGATATAGGTATCACAACAGATAGATATGGTAAGTTATCTATTGATGATAC
TAAGCTTGATAAAGTGCTTTCTGAGGATATGTCTAGTGTTGAAGCTCTCTTTGCTACACCAGAAAAAGGCTTAGCTAATC
GGTTTTACGATGTTTCTGAAAGCTATGTTAAATCCCGAGGCGTGATTGCAGATAGAGAGACAAGTTATACTAATCAGCAA
AGTAGGTTAGCAGAACAAAGAGAAGCTTTTACTCTTAAAATGGACCAGTTAACTGCCCGTTTAACAAAACAGTTTAATGC
AATGGATCTTGTCGTAGGACAACTTAACCAGCAGAGTAGTGCTTTACTTGCTAGTTTAAACTCGCTTCCTGGAGTAGTTA
AAAAGAGTTAG

Upstream 100 bases:

>100_bases
AGTTAGCCGAAAAACTGTCTGAAGTGACTGGGCTTTTGATGAAAACAGAGGCTTAAAATTCACACAATTTTATATATCCG
TTGATAGGTAAGAGGTTTAT

Downstream 100 bases:

>100_bases
TAAGTAAGGAAACGTCTAGTGAAACAACTTAATGAACTTAATGAACTTAATATAACGCTCAGCGACACATTGAATCAGTT
AACTCGCATCCCCGCAGAAT

Product: flagellar hook-associated 2 domain-containing protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MALTATGIGSGLDVDNIVKVLVDAEKTPKEAMFKAQEDSIKAEVSAMGTLKSALTTFQDAVKKLQTGDALNQRKISVSNS
TYITATADKTAQTGSYAIKVEQLAVNHKIAGTNVTDPALGVGEGSLAFGVNGNNFSVDVSATDSLDAIAKKVNEAPDNVG
VTATVITSDAGSRLVFSSDKSGEDNQISITATDTTGSGLSNMFDAMNTTTLQDAKNAVLYIDNQKVTSQTNEVKNAITGV
TLQLTDADLTKTTSLKIEQDNDAVKTNVKAFVDAYNSLVTTVDKLSSYDQDTNTAAALQGDSMIRSIESQLRSIASERVP
TEDGGSIALYDIGITTDRYGKLSIDDTKLDKVLSEDMSSVEALFATPEKGLANRFYDVSESYVKSRGVIADRETSYTNQQ
SRLAEQREAFTLKMDQLTARLTKQFNAMDLVVGQLNQQSSALLASLNSLPGVVKKS

Sequences:

>Translated_456_residues
MALTATGIGSGLDVDNIVKVLVDAEKTPKEAMFKAQEDSIKAEVSAMGTLKSALTTFQDAVKKLQTGDALNQRKISVSNS
TYITATADKTAQTGSYAIKVEQLAVNHKIAGTNVTDPALGVGEGSLAFGVNGNNFSVDVSATDSLDAIAKKVNEAPDNVG
VTATVITSDAGSRLVFSSDKSGEDNQISITATDTTGSGLSNMFDAMNTTTLQDAKNAVLYIDNQKVTSQTNEVKNAITGV
TLQLTDADLTKTTSLKIEQDNDAVKTNVKAFVDAYNSLVTTVDKLSSYDQDTNTAAALQGDSMIRSIESQLRSIASERVP
TEDGGSIALYDIGITTDRYGKLSIDDTKLDKVLSEDMSSVEALFATPEKGLANRFYDVSESYVKSRGVIADRETSYTNQQ
SRLAEQREAFTLKMDQLTARLTKQFNAMDLVVGQLNQQSSALLASLNSLPGVVKKS
>Mature_455_residues
ALTATGIGSGLDVDNIVKVLVDAEKTPKEAMFKAQEDSIKAEVSAMGTLKSALTTFQDAVKKLQTGDALNQRKISVSNST
YITATADKTAQTGSYAIKVEQLAVNHKIAGTNVTDPALGVGEGSLAFGVNGNNFSVDVSATDSLDAIAKKVNEAPDNVGV
TATVITSDAGSRLVFSSDKSGEDNQISITATDTTGSGLSNMFDAMNTTTLQDAKNAVLYIDNQKVTSQTNEVKNAITGVT
LQLTDADLTKTTSLKIEQDNDAVKTNVKAFVDAYNSLVTTVDKLSSYDQDTNTAAALQGDSMIRSIESQLRSIASERVPT
EDGGSIALYDIGITTDRYGKLSIDDTKLDKVLSEDMSSVEALFATPEKGLANRFYDVSESYVKSRGVIADRETSYTNQQS
RLAEQREAFTLKMDQLTARLTKQFNAMDLVVGQLNQQSSALLASLNSLPGVVKKS

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=467, Percent_Identity=31.6916488222698, Blast_Score=143, Evalue=2e-35,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 48523; Mature: 48392

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS00107 PROTEIN_KINASE_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTATGIGSGLDVDNIVKVLVDAEKTPKEAMFKAQEDSIKAEVSAMGTLKSALTTFQDA
CEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKKLQTGDALNQRKISVSNSTYITATADKTAQTGSYAIKVEQLAVNHKIAGTNVTDPALG
HHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCEEEEEEEEEECEEECCCCCCCCCCC
VGEGSLAFGVNGNNFSVDVSATDSLDAIAKKVNEAPDNVGVTATVITSDAGSRLVFSSDK
CCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCC
SGEDNQISITATDTTGSGLSNMFDAMNTTTLQDAKNAVLYIDNQKVTSQTNEVKNAITGV
CCCCCEEEEEEECCCCCCHHHHHHHHCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHCCE
TLQLTDADLTKTTSLKIEQDNDAVKTNVKAFVDAYNSLVTTVDKLSSYDQDTNTAAALQG
EEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
DSMIRSIESQLRSIASERVPTEDGGSIALYDIGITTDRYGKLSIDDTKLDKVLSEDMSSV
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHH
EALFATPEKGLANRFYDVSESYVKSRGVIADRETSYTNQQSRLAEQREAFTLKMDQLTAR
HHHHCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHEEHHHHHHHH
LTKQFNAMDLVVGQLNQQSSALLASLNSLPGVVKKS
HHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ALTATGIGSGLDVDNIVKVLVDAEKTPKEAMFKAQEDSIKAEVSAMGTLKSALTTFQDA
EEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKKLQTGDALNQRKISVSNSTYITATADKTAQTGSYAIKVEQLAVNHKIAGTNVTDPALG
HHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCEEEEEEEEEECEEECCCCCCCCCCC
VGEGSLAFGVNGNNFSVDVSATDSLDAIAKKVNEAPDNVGVTATVITSDAGSRLVFSSDK
CCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCC
SGEDNQISITATDTTGSGLSNMFDAMNTTTLQDAKNAVLYIDNQKVTSQTNEVKNAITGV
CCCCCEEEEEEECCCCCCHHHHHHHHCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHCCE
TLQLTDADLTKTTSLKIEQDNDAVKTNVKAFVDAYNSLVTTVDKLSSYDQDTNTAAALQG
EEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
DSMIRSIESQLRSIASERVPTEDGGSIALYDIGITTDRYGKLSIDDTKLDKVLSEDMSSV
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHH
EALFATPEKGLANRFYDVSESYVKSRGVIADRETSYTNQQSRLAEQREAFTLKMDQLTAR
HHHHCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHEEHHHHHHHH
LTKQFNAMDLVVGQLNQQSSALLASLNSLPGVVKKS
HHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9488388; 10678962 [H]