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The map label for this gene is trbE [H]

Identifier: 117919733

GI number: 117919733

Start: 1495263

End: 1497713

Strand: Direct

Name: trbE [H]

Synonym: Shewana3_1285

Alternate gene names: 117919733

Gene position: 1495263-1497713 (Clockwise)

Preceding gene: 117919732

Following gene: 117919734

Centisome position: 30.07

GC content: 66.42

Gene sequence:

>2451_bases
ATGCTGAACCTTGCCGAATACCGCCAGCGGCCCGCGCTGCTGGCCGACTGGCTTCCCTGGGCCGGGCTGATCGCGCCGGG
CGTTGTGCTGAACAAGGATGGCTCTTTCCAGCGCACGGCACGTTTTCGCGGGCCGGACTTGGACAGCGCCACGCAAGGCG
AGTTGATCGCCGCATCCGCGCGGCTCAACAACGCGCTGCGCCGCCTGGGTTCGGGCTGGGCCTTGTTCATCGAGGCCGAG
CGCCGACCGGCTGCGGGCTATCCGCACTCGGATTTTCCCGAGCCGCTGTCCTGGTTGGTGGACGAGGAACGCCGCGCCGC
CTTCGAGGAATCGGGCCATCACTTCGAGAGCGGTTATCACCTGACGATGGTGTTTCTCCCGCCGGAGGAATCGCGCGCCC
GCGCTGCCAAGCTGCTCTACGAGAACTCGCCCGGCGACGGCGTGGACTGGCGTGGTCGGCTCGATGCCTTCGTGGCTGAA
ACCGATCGCGTGTTCGATCTGCTCGATGGCGTGATGCCGGAAATCGCCTGGCTCGATGACGACGACACGCTGACCGGCCT
GCACGCGACGGTTTCGACGCGGCGCTACCGGCTCGGCGTACCCGAAGTACCGTTCCATATCGACGCGCTACTGGCCGACT
GCGCCCTGGTCGGTGGCCTTGCGCCGATGCTGGGCGACCAGCACCTGCGGGTGGTGTCGGTGCGTGGCTTTCCGACCTCG
ACCTGGCCGGGGATTCTGGACGACCTCAACCGCCTGGGCTTTGGCTACCGCTGGAGCACACGCTTTCTCTGCATGGACAA
AGCCGAGGCCGAAAAGGAACTCGGCCGCCTGCGCCGCCAGTGGTTCGCCAAGCGCAAGAACGTCGTCGCACTGCTGCGCG
AAACGATCTTCCAGCAGGAAAGCCCGCTGGTGGATACCGACGCCAGCAACAAGGCCGCCGACGCCGATGCGGCCTTGCAG
GAGTTGGGCAGCGATCAAGTCGCGTTCGGCTATCTCACCGCCACGGTGACAGTGCTCGACGCCGACCCGGCAGTGGCCGA
CGAGAAGCTGCGCATGGTGGAGCGCGTCATCCAGGGTCGGGGCTTCGTGACGATTCCCGAAACCTTGAACGCGGTCGATG
CCTGGCTGTCGTCCATCCCCGGCAACGCTTACGCGAACGTGCGCCAGCCCATCTTCTCGACGCTGAACCTGGCGCACATG
ATGCCGCTGTCGGCGGTGTGGGCCGGGCCGGAGAAGAACGACCATCTGGACGGCCCGCCGCTGATCGTCACCCGCACCGA
TGGCGCGACGCCTTTTCGCTTGGTCACGCACATCGGCGACGTGGGCCACACACTGGTCGCCGGGCCGACCGGCATGGGCA
AGTCGGTACTGCTTGCCATTCTGGCCATGCAGTTCCGGCGCTACTTCGGCTCGCGGATCTTCGCCTTCGACATGGGCCGC
TCCATGCGTGCCACCATCCTCGGCCTCGGCGGCGAACACTACGACCTCGGCGCCGATGGCGGCATCGCCTTTCAGCCGTT
GGCCCGTATCGACAGCGAGGGCTACCGCACCTGGGCGGCTGAATGGGTGGAAGGCCGGCTACTGCACGAAGGCGTGACCG
TCGGCCCCGACGAGAAGGCAGCCATCTGGTCGGCGCTGGGTAGCCTCGCCGGTGCGCCGGTGGAACAGCGCACGCTGACC
GGGCTTTCCGTGCTGCTGCAATCGAACGCGCTACGGCAAGCGCTGTCGCCCTATGTGCTTGGCGGCGCCCACGGCAAGCT
GCTGGACGCCGACCGCGACCGGCTGGGCATGGCCGACGTGCAGGGCTTCGAGATGGAAGAACTGATGCACAGCCCCGCCG
CCGTGCAAGCGGTGCTGCGCTACCTGTTCGCCCGCTTCGATGAGCGTTTCGATGGTGCGCCCACGCTGCTGATTCTGGAT
GAAGCCTGGCTGTTCCTCGATGAGCCATCTTTCGCGGCCCGCATCCGGCAATGGCTCAAGACGCTCAGGAAAAAGAACGT
CAGCGTCATCTTCGCCACGCAGAGCCTGGCAGACATCAAGGACTCGACCATCGCGCCCGCGATCATCGAGAGCTGCGCCA
GTCGGATTTTCTTGCCTAACCCGCAGGCGACCGAGCCGCAGATTCGCACGATCTATGAGGGTTTCGGGCTCAACAGCCGG
CAGATCGAGATCGTCGCCACCGCGCAGCCCAAGCGCGACTACTACTACCAGTCGCGTCTCGGCAACCGCCTATTCGACCT
CGACCTGGGGCCGTTGGCGCTCGCCTTCGCGGGCGCATCCACCCCTCAAGACCAACGCGACATCGACCGCGTGTTGACGC
AGGCCGGCGCCCCCGGCTTCACCGGCGCGTGGCTGCGCCATCGCGGCCTCGACTGGGCCGCCGACCTGCTGCCGTCCTCA
CCGGCGGCCGCTTCGTTTCTCAACTCCCAACCACTGGAGGTTTCACCATGA

Upstream 100 bases:

>100_bases
TCGCTGGCCGTATGGGGCGCGCGTGTCGATCCGCAGTTCATGCAGGTCTTCGCCCGGCACATCAAGCACAAGCCGCTGCT
GGACGTGTGAGGACGATGCC

Downstream 100 bases:

>100_bases
AGACTAAGCCCCGTTTGCTGTCCGTCTCGCTCGCCGCCGTGCTGTCGGTATCGCTGCTGGCCGTGCAGCCCGCGTCCGCG
CTGACGGTGTTCGACCCGTC

Product: conjugal transfer ATPase TrbE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 816; Mature: 816

Protein sequence:

>816_residues
MLNLAEYRQRPALLADWLPWAGLIAPGVVLNKDGSFQRTARFRGPDLDSATQGELIAASARLNNALRRLGSGWALFIEAE
RRPAAGYPHSDFPEPLSWLVDEERRAAFEESGHHFESGYHLTMVFLPPEESRARAAKLLYENSPGDGVDWRGRLDAFVAE
TDRVFDLLDGVMPEIAWLDDDDTLTGLHATVSTRRYRLGVPEVPFHIDALLADCALVGGLAPMLGDQHLRVVSVRGFPTS
TWPGILDDLNRLGFGYRWSTRFLCMDKAEAEKELGRLRRQWFAKRKNVVALLRETIFQQESPLVDTDASNKAADADAALQ
ELGSDQVAFGYLTATVTVLDADPAVADEKLRMVERVIQGRGFVTIPETLNAVDAWLSSIPGNAYANVRQPIFSTLNLAHM
MPLSAVWAGPEKNDHLDGPPLIVTRTDGATPFRLVTHIGDVGHTLVAGPTGMGKSVLLAILAMQFRRYFGSRIFAFDMGR
SMRATILGLGGEHYDLGADGGIAFQPLARIDSEGYRTWAAEWVEGRLLHEGVTVGPDEKAAIWSALGSLAGAPVEQRTLT
GLSVLLQSNALRQALSPYVLGGAHGKLLDADRDRLGMADVQGFEMEELMHSPAAVQAVLRYLFARFDERFDGAPTLLILD
EAWLFLDEPSFAARIRQWLKTLRKKNVSVIFATQSLADIKDSTIAPAIIESCASRIFLPNPQATEPQIRTIYEGFGLNSR
QIEIVATAQPKRDYYYQSRLGNRLFDLDLGPLALAFAGASTPQDQRDIDRVLTQAGAPGFTGAWLRHRGLDWAADLLPSS
PAAASFLNSQPLEVSP

Sequences:

>Translated_816_residues
MLNLAEYRQRPALLADWLPWAGLIAPGVVLNKDGSFQRTARFRGPDLDSATQGELIAASARLNNALRRLGSGWALFIEAE
RRPAAGYPHSDFPEPLSWLVDEERRAAFEESGHHFESGYHLTMVFLPPEESRARAAKLLYENSPGDGVDWRGRLDAFVAE
TDRVFDLLDGVMPEIAWLDDDDTLTGLHATVSTRRYRLGVPEVPFHIDALLADCALVGGLAPMLGDQHLRVVSVRGFPTS
TWPGILDDLNRLGFGYRWSTRFLCMDKAEAEKELGRLRRQWFAKRKNVVALLRETIFQQESPLVDTDASNKAADADAALQ
ELGSDQVAFGYLTATVTVLDADPAVADEKLRMVERVIQGRGFVTIPETLNAVDAWLSSIPGNAYANVRQPIFSTLNLAHM
MPLSAVWAGPEKNDHLDGPPLIVTRTDGATPFRLVTHIGDVGHTLVAGPTGMGKSVLLAILAMQFRRYFGSRIFAFDMGR
SMRATILGLGGEHYDLGADGGIAFQPLARIDSEGYRTWAAEWVEGRLLHEGVTVGPDEKAAIWSALGSLAGAPVEQRTLT
GLSVLLQSNALRQALSPYVLGGAHGKLLDADRDRLGMADVQGFEMEELMHSPAAVQAVLRYLFARFDERFDGAPTLLILD
EAWLFLDEPSFAARIRQWLKTLRKKNVSVIFATQSLADIKDSTIAPAIIESCASRIFLPNPQATEPQIRTIYEGFGLNSR
QIEIVATAQPKRDYYYQSRLGNRLFDLDLGPLALAFAGASTPQDQRDIDRVLTQAGAPGFTGAWLRHRGLDWAADLLPSS
PAAASFLNSQPLEVSP
>Mature_816_residues
MLNLAEYRQRPALLADWLPWAGLIAPGVVLNKDGSFQRTARFRGPDLDSATQGELIAASARLNNALRRLGSGWALFIEAE
RRPAAGYPHSDFPEPLSWLVDEERRAAFEESGHHFESGYHLTMVFLPPEESRARAAKLLYENSPGDGVDWRGRLDAFVAE
TDRVFDLLDGVMPEIAWLDDDDTLTGLHATVSTRRYRLGVPEVPFHIDALLADCALVGGLAPMLGDQHLRVVSVRGFPTS
TWPGILDDLNRLGFGYRWSTRFLCMDKAEAEKELGRLRRQWFAKRKNVVALLRETIFQQESPLVDTDASNKAADADAALQ
ELGSDQVAFGYLTATVTVLDADPAVADEKLRMVERVIQGRGFVTIPETLNAVDAWLSSIPGNAYANVRQPIFSTLNLAHM
MPLSAVWAGPEKNDHLDGPPLIVTRTDGATPFRLVTHIGDVGHTLVAGPTGMGKSVLLAILAMQFRRYFGSRIFAFDMGR
SMRATILGLGGEHYDLGADGGIAFQPLARIDSEGYRTWAAEWVEGRLLHEGVTVGPDEKAAIWSALGSLAGAPVEQRTLT
GLSVLLQSNALRQALSPYVLGGAHGKLLDADRDRLGMADVQGFEMEELMHSPAAVQAVLRYLFARFDERFDGAPTLLILD
EAWLFLDEPSFAARIRQWLKTLRKKNVSVIFATQSLADIKDSTIAPAIIESCASRIFLPNPQATEPQIRTIYEGFGLNSR
QIEIVATAQPKRDYYYQSRLGNRLFDLDLGPLALAFAGASTPQDQRDIDRVLTQAGAPGFTGAWLRHRGLDWAADLLPSS
PAAASFLNSQPLEVSP

Specific function: Unknown

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbE/virB4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004346
- InterPro:   IPR018145 [H]

Pfam domain/function: PF03135 CagE_TrbE_VirB [H]

EC number: NA

Molecular weight: Translated: 89686; Mature: 89686

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLAEYRQRPALLADWLPWAGLIAPGVVLNKDGSFQRTARFRGPDLDSATQGELIAASA
CCCHHHHHCCCCHHHHHCCHHHHHCCCEEECCCCCCHHHHHCCCCCCCCCCCCCEEEHHH
RLNNALRRLGSGWALFIEAERRPAAGYPHSDFPEPLSWLVDEERRAAFEESGHHFESGYH
HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHCCCEECCCEE
LTMVFLPPEESRARAAKLLYENSPGDGVDWRGRLDAFVAETDRVFDLLDGVMPEIAWLDD
EEEEEECCCHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCC
DDTLTGLHATVSTRRYRLGVPEVPFHIDALLADCALVGGLAPMLGDQHLRVVSVRGFPTS
CCCEEEEHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
TWPGILDDLNRLGFGYRWSTRFLCMDKAEAEKELGRLRRQWFAKRKNVVALLRETIFQQE
CCCHHHHHHHHCCCCEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPLVDTDASNKAADADAALQELGSDQVAFGYLTATVTVLDADPAVADEKLRMVERVIQGR
CCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHCC
GFVTIPETLNAVDAWLSSIPGNAYANVRQPIFSTLNLAHMMPLSAVWAGPEKNDHLDGPP
CCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCC
LIVTRTDGATPFRLVTHIGDVGHTLVAGPTGMGKSVLLAILAMQFRRYFGSRIFAFDMGR
EEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCC
SMRATILGLGGEHYDLGADGGIAFQPLARIDSEGYRTWAAEWVEGRLLHEGVTVGPDEKA
CCEEEEEECCCCEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCCCCCCHH
AIWSALGSLAGAPVEQRTLTGLSVLLQSNALRQALSPYVLGGAHGKLLDADRDRLGMADV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHC
QGFEMEELMHSPAAVQAVLRYLFARFDERFDGAPTLLILDEAWLFLDEPSFAARIRQWLK
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCHHHHHHHHHHH
TLRKKNVSVIFATQSLADIKDSTIAPAIIESCASRIFLPNPQATEPQIRTIYEGFGLNSR
HHHHCCCEEEEEECHHHHCCCCCCHHHHHHHHHHCEECCCCCCCCCHHHHHHHHCCCCCC
QIEIVATAQPKRDYYYQSRLGNRLFDLDLGPLALAFAGASTPQDQRDIDRVLTQAGAPGF
EEEEEEECCCCHHHHHHHHHCCEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC
TGAWLRHRGLDWAADLLPSSPAAASFLNSQPLEVSP
CCHHHHHCCCCHHHHHCCCCCHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLNLAEYRQRPALLADWLPWAGLIAPGVVLNKDGSFQRTARFRGPDLDSATQGELIAASA
CCCHHHHHCCCCHHHHHCCHHHHHCCCEEECCCCCCHHHHHCCCCCCCCCCCCCEEEHHH
RLNNALRRLGSGWALFIEAERRPAAGYPHSDFPEPLSWLVDEERRAAFEESGHHFESGYH
HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHCCCEECCCEE
LTMVFLPPEESRARAAKLLYENSPGDGVDWRGRLDAFVAETDRVFDLLDGVMPEIAWLDD
EEEEEECCCHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCC
DDTLTGLHATVSTRRYRLGVPEVPFHIDALLADCALVGGLAPMLGDQHLRVVSVRGFPTS
CCCEEEEHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
TWPGILDDLNRLGFGYRWSTRFLCMDKAEAEKELGRLRRQWFAKRKNVVALLRETIFQQE
CCCHHHHHHHHCCCCEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPLVDTDASNKAADADAALQELGSDQVAFGYLTATVTVLDADPAVADEKLRMVERVIQGR
CCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHCC
GFVTIPETLNAVDAWLSSIPGNAYANVRQPIFSTLNLAHMMPLSAVWAGPEKNDHLDGPP
CCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCC
LIVTRTDGATPFRLVTHIGDVGHTLVAGPTGMGKSVLLAILAMQFRRYFGSRIFAFDMGR
EEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCC
SMRATILGLGGEHYDLGADGGIAFQPLARIDSEGYRTWAAEWVEGRLLHEGVTVGPDEKA
CCEEEEEECCCCEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCCCCCCHH
AIWSALGSLAGAPVEQRTLTGLSVLLQSNALRQALSPYVLGGAHGKLLDADRDRLGMADV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHC
QGFEMEELMHSPAAVQAVLRYLFARFDERFDGAPTLLILDEAWLFLDEPSFAARIRQWLK
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCHHHHHHHHHHH
TLRKKNVSVIFATQSLADIKDSTIAPAIIESCASRIFLPNPQATEPQIRTIYEGFGLNSR
HHHHCCCEEEEEECHHHHCCCCCCHHHHHHHHHHCEECCCCCCCCCHHHHHHHHCCCCCC
QIEIVATAQPKRDYYYQSRLGNRLFDLDLGPLALAFAGASTPQDQRDIDRVLTQAGAPGF
EEEEEEECCCCHHHHHHHHHCCEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC
TGAWLRHRGLDWAADLLPSSPAAASFLNSQPLEVSP
CCHHHHHCCCCHHHHHCCCCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]