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The map label for this gene is 117919731

Identifier: 117919731

GI number: 117919731

Start: 1494600

End: 1494986

Strand: Direct

Name: 117919731

Synonym: Shewana3_1283

Alternate gene names: NA

Gene position: 1494600-1494986 (Clockwise)

Preceding gene: 117919730

Following gene: 117919732

Centisome position: 30.06

GC content: 65.12

Gene sequence:

>387_bases
ATGACACACGCCCATGCTTTCCGCTTTTCCGTAAATCCGCTTCCCCACCTGTCCGGTCTCATGCGGCTGCGCAGCCTCGC
GCGCCCTGCGGGGCAGGGGCTGCTGCTGGCCGCACTGCTGCTGTTCCTGGCGGATACGGCGCAGGCCGCCGGTTCCTCGA
TGCCGTGGGAGGGGCCGTTGCAGTCGATCTTGGAGTCGATTCAGGGGCCGGTCGCACGCATCGTCGCGGTCATCATCATC
ATCGCCACGGGCCTCGCGCTCGCCTTCGGCGACACGTCGGGAGGCTTTCGCAAACTGATCCAGATCGTCTTCGGTCTGTC
CATTGCGTTCGCCGCGTCCTCGTTCTTCCTGTCGTTCTTCAGCTTCTCCGGCGGGGCCGTCGTATGA

Upstream 100 bases:

>100_bases
CGGACGCGCTGGAAACGCCGTTTCCCGAATTGATCCCGCTTCCGCTCGCAGCCGACGCCGCTGCGCTTCCCCCGTCCCCT
GACCAACCTGGAGAACTGCC

Downstream 100 bases:

>100_bases
GCACGGCCAACGATCTTCCCGGCTTCGAGGTGCCGCTGCATCGCTCGCTGACCGAGCCAATCCTGCTTGGTGGTGCGCCG
CGCACGGTCGCCATTGCGAA

Product: conjugal transfer protein TrbC

Products: NA

Alternate protein names: Conjugal Transfer Protein; Conjugal Transfer Protein Trbc; TrbC-Like Protein; Conjugative Transfer Protein TrbC; Conjugal Transfer Protein TRBC; Type IV Secretory Pathway VirB2 Component; Conjugal Transfer TrbC Transmembrane Protein

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MTHAHAFRFSVNPLPHLSGLMRLRSLARPAGQGLLLAALLLFLADTAQAAGSSMPWEGPLQSILESIQGPVARIVAVIII
IATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV

Sequences:

>Translated_128_residues
MTHAHAFRFSVNPLPHLSGLMRLRSLARPAGQGLLLAALLLFLADTAQAAGSSMPWEGPLQSILESIQGPVARIVAVIII
IATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV
>Mature_127_residues
THAHAFRFSVNPLPHLSGLMRLRSLARPAGQGLLLAALLLFLADTAQAAGSSMPWEGPLQSILESIQGPVARIVAVIIII
ATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV

Specific function: Unknown

COG id: COG3838

COG function: function code U; Type IV secretory pathway, VirB2 components (pilins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13358; Mature: 13227

Theoretical pI: Translated: 11.84; Mature: 11.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHAHAFRFSVNPLPHLSGLMRLRSLARPAGQGLLLAALLLFLADTAQAAGSSMPWEGPL
CCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH
QSILESIQGPVARIVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFF
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFSGGAVV
HCCCCCCC
>Mature Secondary Structure 
THAHAFRFSVNPLPHLSGLMRLRSLARPAGQGLLLAALLLFLADTAQAAGSSMPWEGPL
CCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH
QSILESIQGPVARIVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFF
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFSGGAVV
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA