| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117919702
Identifier: 117919702
GI number: 117919702
Start: 1467107
End: 1467916
Strand: Reverse
Name: 117919702
Synonym: Shewana3_1253
Alternate gene names: NA
Gene position: 1467916-1467107 (Counterclockwise)
Preceding gene: 117919703
Following gene: 117919698
Centisome position: 29.52
GC content: 51.48
Gene sequence:
>810_bases ATGAGTTCAACAGGAACAATGAATCCACAGCAGATCTGCGAAGACTTTCTCCGAAAGGAAATTCGTTACAACAGTGAACA CCATATCCTGCCAAGCGAAAGCGCCGTCGCGGATCGGCTGCTAGATCGCGGGATTGAGATGAAGCACGTCTATGAAGAAC TGCATGAAAAGCTTCACCTGCACCCACCAGCACTCTCGCTTCTCCTTGGTTTGGTTCTGAGTGCAGCCGCTTTCTGGAGC CCGGAGAAAATACAGAGAGCGCGAACTGCGCGAGACGATCTCACCAAGACCAATCACCAAATTGCAAAGAAGGCGACAGA GTTAGCAATGCTGCTGGAGCGACGTTCTGACCTGCATAATACATCTGGCTTTAGTAGTGATACTCACTATCACGTCTGCG ACGTGCTTGAGGCGGCCTCCCAGCACAATTATCTATTCACGTCCTATGTACAAGATCACCTGGATGCTTTGAGAGGACAA TTTGACCTCAAGTACTGGCCTTCACTGAGCGAATTTTTGCAGGTATTAGCATTAGATGCGAAGACCGCCAACACGACTGC AACGGATCCCTTGACCGCTGCCGCAACTGCGGCAGTCCGTGCATCCAAGGCAGATTTTTTCAAAGCGCTGTTCGCCGCTA TTGAGGAGAACTGCGCCGATAATTACGGCCGCTTACCAAACGGCTTCAAGCTTTCCGACCGGGCACTGGCCTCACTAGGC AACTGCGCATTGGATCTTGACCCCGACGACTTGGTCGATGATGCATATATCAAACGATTCCGGCAGCGTGAACGCAGTGG AGCCAAGTAG
Upstream 100 bases:
>100_bases TGGAGGTACCTCAACGTCTATTAAATAGTGTTTGCTGAGATACCGACGAATTCGCTTTGACTCAATATGCTGTGGAGCAC TACAACATTGAGGATCGACC
Downstream 100 bases:
>100_bases CAAAGTCCGGCGAAGCAAAAAAAGGGGGCCGAAGCCCCCTGGGTCAGATCAGGCCACGTTCGGCAAAGGACATAGTATCG CTACCGGCGACAATGACATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSSTGTMNPQQICEDFLRKEIRYNSEHHILPSESAVADRLLDRGIEMKHVYEELHEKLHLHPPALSLLLGLVLSAAAFWS PEKIQRARTARDDLTKTNHQIAKKATELAMLLERRSDLHNTSGFSSDTHYHVCDVLEAASQHNYLFTSYVQDHLDALRGQ FDLKYWPSLSEFLQVLALDAKTANTTATDPLTAAATAAVRASKADFFKALFAAIEENCADNYGRLPNGFKLSDRALASLG NCALDLDPDDLVDDAYIKRFRQRERSGAK
Sequences:
>Translated_269_residues MSSTGTMNPQQICEDFLRKEIRYNSEHHILPSESAVADRLLDRGIEMKHVYEELHEKLHLHPPALSLLLGLVLSAAAFWS PEKIQRARTARDDLTKTNHQIAKKATELAMLLERRSDLHNTSGFSSDTHYHVCDVLEAASQHNYLFTSYVQDHLDALRGQ FDLKYWPSLSEFLQVLALDAKTANTTATDPLTAAATAAVRASKADFFKALFAAIEENCADNYGRLPNGFKLSDRALASLG NCALDLDPDDLVDDAYIKRFRQRERSGAK >Mature_268_residues SSTGTMNPQQICEDFLRKEIRYNSEHHILPSESAVADRLLDRGIEMKHVYEELHEKLHLHPPALSLLLGLVLSAAAFWSP EKIQRARTARDDLTKTNHQIAKKATELAMLLERRSDLHNTSGFSSDTHYHVCDVLEAASQHNYLFTSYVQDHLDALRGQF DLKYWPSLSEFLQVLALDAKTANTTATDPLTAAATAAVRASKADFFKALFAAIEENCADNYGRLPNGFKLSDRALASLGN CALDLDPDDLVDDAYIKRFRQRERSGAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30173; Mature: 30042
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTGTMNPQQICEDFLRKEIRYNSEHHILPSESAVADRLLDRGIEMKHVYEELHEKLHL CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCC HPPALSLLLGLVLSAAAFWSPEKIQRARTARDDLTKTNHQIAKKATELAMLLERRSDLHN CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TSGFSSDTHYHVCDVLEAASQHNYLFTSYVQDHLDALRGQFDLKYWPSLSEFLQVLALDA CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHCC KTANTTATDPLTAAATAAVRASKADFFKALFAAIEENCADNYGRLPNGFKLSDRALASLG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHC NCALDLDPDDLVDDAYIKRFRQRERSGAK CCEECCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SSTGTMNPQQICEDFLRKEIRYNSEHHILPSESAVADRLLDRGIEMKHVYEELHEKLHL CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCC HPPALSLLLGLVLSAAAFWSPEKIQRARTARDDLTKTNHQIAKKATELAMLLERRSDLHN CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TSGFSSDTHYHVCDVLEAASQHNYLFTSYVQDHLDALRGQFDLKYWPSLSEFLQVLALDA CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHCC KTANTTATDPLTAAATAAVRASKADFFKALFAAIEENCADNYGRLPNGFKLSDRALASLG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHC NCALDLDPDDLVDDAYIKRFRQRERSGAK CCEECCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA