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The map label for this gene is ydaV [C]

Identifier: 117919700

GI number: 117919700

Start: 1465494

End: 1466249

Strand: Direct

Name: ydaV [C]

Synonym: Shewana3_1251

Alternate gene names: 117919700

Gene position: 1465494-1466249 (Clockwise)

Preceding gene: 117919699

Following gene: 117919701

Centisome position: 29.47

GC content: 58.99

Gene sequence:

>756_bases
ATGACCCAACAAACGCTGACCCGCTTGAGACACCTGAAACTGACCGGCATGGCGGATGCCGTGCAACAACAACTGGAACA
GGCAAGTACCTACGAAGGGCTGCCCTTCATCGAGCGGCTAAGCCTGCTGGTCGAACACGAACAACTGAGCCGGGAGCAGC
GTAAACAAGCTCGGCTGGTCAAGCAGGCGAGGCTCAAACTCCAGGCCACGGTGCAAGAGGTGGACTACCAGTCTGCACGC
AACCTGGAGCGGTCACAGGTGGCAAACCTGGCCCAAGGAGAGTGGCTGCGCCGGGGCCAGAACCTGCTCATTACCGGCCC
CTGTGGCTGCGGAAAAACCTACCTAGCCTGTGCGCTGGGCTACCAAGCCTGTCAGCAGGGGCACAGCACTCGTTACTACC
GGCTGCCGCGTCTGCTACTTGAGCTGAGCCAGGCCAAGGTAGATGGCAGTTACGCCAGACTGCTGGGTCAACTGGCAAGG
ATAGAGCTGCTGATCCTGGATGACTGGGGACTGGAAGCGGTGAATGCCGAGCAGCGCAACGCCCTGCTGGAGATCATGGA
TGATCGGTACGGGAAATACTCGACGGTCGTGGTCAGTCAGCTGCCAACGGAAGAGTGGTACGCGAGCTTGGGGGACAACA
CTCTGGCAGATGCGATCCTGGACCGGCTGATGCACAACGCTCACCGGCTGTCACTGAAGGGAGAATCGATGAGAAAGAGG
AGAAGTGAGTTGACCCAATCTGAACACTCGAGTTAG

Upstream 100 bases:

>100_bases
GCGACCAACTGCCCGCAAGCCCGCTGAGCTACCCAGAGTTACCGCAAGAGCACGAGAACATCCGTGGCCCCCAGAGCTTC
CACTAAAGAGGATACGTCCC

Downstream 100 bases:

>100_bases
AAACGGGGTGACGTGAGCGCGTTAAGGATCAGGGTGTTCACGTTGGCCGGAATGGCTGTTCAACTTCGCCGGAATACGCA
CCATAAGGGCCTGCGCGCTC

Product: IstB ATP binding domain-containing protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MTQQTLTRLRHLKLTGMADAVQQQLEQASTYEGLPFIERLSLLVEHEQLSREQRKQARLVKQARLKLQATVQEVDYQSAR
NLERSQVANLAQGEWLRRGQNLLITGPCGCGKTYLACALGYQACQQGHSTRYYRLPRLLLELSQAKVDGSYARLLGQLAR
IELLILDDWGLEAVNAEQRNALLEIMDDRYGKYSTVVVSQLPTEEWYASLGDNTLADAILDRLMHNAHRLSLKGESMRKR
RSELTQSEHSS

Sequences:

>Translated_251_residues
MTQQTLTRLRHLKLTGMADAVQQQLEQASTYEGLPFIERLSLLVEHEQLSREQRKQARLVKQARLKLQATVQEVDYQSAR
NLERSQVANLAQGEWLRRGQNLLITGPCGCGKTYLACALGYQACQQGHSTRYYRLPRLLLELSQAKVDGSYARLLGQLAR
IELLILDDWGLEAVNAEQRNALLEIMDDRYGKYSTVVVSQLPTEEWYASLGDNTLADAILDRLMHNAHRLSLKGESMRKR
RSELTQSEHSS
>Mature_250_residues
TQQTLTRLRHLKLTGMADAVQQQLEQASTYEGLPFIERLSLLVEHEQLSREQRKQARLVKQARLKLQATVQEVDYQSARN
LERSQVANLAQGEWLRRGQNLLITGPCGCGKTYLACALGYQACQQGHSTRYYRLPRLLLELSQAKVDGSYARLLGQLARI
ELLILDDWGLEAVNAEQRNALLEIMDDRYGKYSTVVVSQLPTEEWYASLGDNTLADAILDRLMHNAHRLSLKGESMRKRR
SELTQSEHSS

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR002611
- InterPro:   IPR013690 [H]

Pfam domain/function: PF01695 IstB; PF08483 IstB_N [H]

EC number: NA

Molecular weight: Translated: 28596; Mature: 28465

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQQTLTRLRHLKLTGMADAVQQQLEQASTYEGLPFIERLSLLVEHEQLSREQRKQARLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KQARLKLQATVQEVDYQSARNLERSQVANLAQGEWLRRGQNLLITGPCGCGKTYLACALG
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHH
YQACQQGHSTRYYRLPRLLLELSQAKVDGSYARLLGQLARIELLILDDWGLEAVNAEQRN
HHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHH
ALLEIMDDRYGKYSTVVVSQLPTEEWYASLGDNTLADAILDRLMHNAHRLSLKGESMRKR
HHHHHHHHCCCCHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
RSELTQSEHSS
HHHHHHHCCCC
>Mature Secondary Structure 
TQQTLTRLRHLKLTGMADAVQQQLEQASTYEGLPFIERLSLLVEHEQLSREQRKQARLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KQARLKLQATVQEVDYQSARNLERSQVANLAQGEWLRRGQNLLITGPCGCGKTYLACALG
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHH
YQACQQGHSTRYYRLPRLLLELSQAKVDGSYARLLGQLARIELLILDDWGLEAVNAEQRN
HHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHH
ALLEIMDDRYGKYSTVVVSQLPTEEWYASLGDNTLADAILDRLMHNAHRLSLKGESMRKR
HHHHHHHHCCCCHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
RSELTQSEHSS
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7518087 [H]