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The map label for this gene is pilT [H]

Identifier: 117919645

GI number: 117919645

Start: 1403024

End: 1404136

Strand: Direct

Name: pilT [H]

Synonym: Shewana3_1196

Alternate gene names: 117919645

Gene position: 1403024-1404136 (Clockwise)

Preceding gene: 117919644

Following gene: 117919646

Centisome position: 28.22

GC content: 50.04

Gene sequence:

>1113_bases
ATGGATGTCCGTCCGTTTTTAAAAGTCATGGTGGAGCGTAAAGCCTCGGACTTGTTTATTACCGCAGGTTTTCCGCCAAG
CGCCAAAATCGATGGCGAGTTACGCCCATTAGCCGAGAGTGCCTTCACGCCCGCGCAGTCTTTGGATTTTGTCGAATCTG
TAATGACTGAGGCGCAAAAGAAGGAGTTTCACAGCACTCGCGAGTGTAACTTTGCTTTTGCGGTTAAGGATTTAGGGCGT
TTCCGCGTCAGCGCATTCTGGCAGCGTGAATCTCCGGGATGCGTTATGCGCCGGATTGAGACCAAGATCCCTGAGGTAGA
GGACTTAAAACTGCCACCGATTTTAAAAGATCTGGTGATGAGTAAACGGGGTCTTATCATCATGGTCGGGGGGACGGGAA
CCGGTAAGTCGACCTCCTTGGCGGCGTTAGTGGGTTATCGTAACGCCCATGCCCGTGGTCATATCCTCACCATCGAAGAC
CCAGTGGAATTTGTGCACGATCATCGCAAAAGTATCATCACTCAACGCGAAGTGGGTATAGATACAGAATCCTTTGATGC
GGCGTTGAAGAGTTCGCTGCGTCAGGCGCCCGATGTGATTTTGATTGGTGAGATCCGTACTCAAGAAACCATGGAGTTTG
CGCTCTCCTTCGCCGAAACGGGTCACCTCTGTATGGCGACATTGCACGCAAACAACGCTAACCAAGCGTTAGACCGGATC
ATGCACTTAGTGCCTGAGAGTAAACACCAGCAGTTGCTATTCGACTTGTCACTCAACCTGCGCGGCATTGTGGCGCAGCA
ACTGGTGCCTAAGGTTGATGGTACAGGACGACGGGCAGCGATTGAAGTCTTGATCAATACGCCACGTGTCGCGAGCTTGA
TTGCTAAAAACGAGCTGCATTTGCTTAAAGAAACTATGGCTAAATCGAATGAGCAGGGGATGCAGACCTTCGACCAAGCC
TTGCTGCAACTCTATATCGATGGGGAAATCAGCTATGCCGATGCGCTTCACCATGCTGACTCGCCAAACGACTTACGTTT
AATGATCAAATTGCAAAATAAAGAGCCTACCAGTTCAAGCTTTATGGAAGGCGTGACCTTGGATATGGATTAA

Upstream 100 bases:

>100_bases
CGAACAGTGTCTGCAAAACTTAGTGAACCGTGGCCTCATCACCCGTGAGGATGCCATGTCGAAGAGTTCAAACAAACAAG
CGACGTTTTAAGGATTTATG

Downstream 100 bases:

>100_bases
TCCTGTCCGCGGTGATGTGAAAGCAGCTCCCTTGAGCTGCTTTTTTTATCGCTTAAGACAATCGATAACTCGCTGTAGCT
TTTATTTTTTTATTCAATAT

Product: twitching motility protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MDVRPFLKVMVERKASDLFITAGFPPSAKIDGELRPLAESAFTPAQSLDFVESVMTEAQKKEFHSTRECNFAFAVKDLGR
FRVSAFWQRESPGCVMRRIETKIPEVEDLKLPPILKDLVMSKRGLIIMVGGTGTGKSTSLAALVGYRNAHARGHILTIED
PVEFVHDHRKSIITQREVGIDTESFDAALKSSLRQAPDVILIGEIRTQETMEFALSFAETGHLCMATLHANNANQALDRI
MHLVPESKHQQLLFDLSLNLRGIVAQQLVPKVDGTGRRAAIEVLINTPRVASLIAKNELHLLKETMAKSNEQGMQTFDQA
LLQLYIDGEISYADALHHADSPNDLRLMIKLQNKEPTSSSFMEGVTLDMD

Sequences:

>Translated_370_residues
MDVRPFLKVMVERKASDLFITAGFPPSAKIDGELRPLAESAFTPAQSLDFVESVMTEAQKKEFHSTRECNFAFAVKDLGR
FRVSAFWQRESPGCVMRRIETKIPEVEDLKLPPILKDLVMSKRGLIIMVGGTGTGKSTSLAALVGYRNAHARGHILTIED
PVEFVHDHRKSIITQREVGIDTESFDAALKSSLRQAPDVILIGEIRTQETMEFALSFAETGHLCMATLHANNANQALDRI
MHLVPESKHQQLLFDLSLNLRGIVAQQLVPKVDGTGRRAAIEVLINTPRVASLIAKNELHLLKETMAKSNEQGMQTFDQA
LLQLYIDGEISYADALHHADSPNDLRLMIKLQNKEPTSSSFMEGVTLDMD
>Mature_370_residues
MDVRPFLKVMVERKASDLFITAGFPPSAKIDGELRPLAESAFTPAQSLDFVESVMTEAQKKEFHSTRECNFAFAVKDLGR
FRVSAFWQRESPGCVMRRIETKIPEVEDLKLPPILKDLVMSKRGLIIMVGGTGTGKSTSLAALVGYRNAHARGHILTIED
PVEFVHDHRKSIITQREVGIDTESFDAALKSSLRQAPDVILIGEIRTQETMEFALSFAETGHLCMATLHANNANQALDRI
MHLVPESKHQQLLFDLSLNLRGIVAQQLVPKVDGTGRRAAIEVLINTPRVASLIAKNELHLLKETMAKSNEQGMQTFDQA
LLQLYIDGEISYADALHHADSPNDLRLMIKLQNKEPTSSSFMEGVTLDMD

Specific function: May be involved in pilus retraction [H]

COG id: COG5008

COG function: function code NU; Tfp pilus assembly protein, ATPase PilU

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI87082188, Length=321, Percent_Identity=36.4485981308411, Blast_Score=217, Evalue=9e-58,
Organism=Escherichia coli, GI1789723, Length=159, Percent_Identity=40.8805031446541, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1786296, Length=282, Percent_Identity=29.0780141843972, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR006321
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 41174; Mature: 41174

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVRPFLKVMVERKASDLFITAGFPPSAKIDGELRPLAESAFTPAQSLDFVESVMTEAQK
CCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
KEFHSTRECNFAFAVKDLGRFRVSAFWQRESPGCVMRRIETKIPEVEDLKLPPILKDLVM
HHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHH
SKRGLIIMVGGTGTGKSTSLAALVGYRNAHARGHILTIEDPVEFVHDHRKSIITQREVGI
CCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCC
DTESFDAALKSSLRQAPDVILIGEIRTQETMEFALSFAETGHLCMATLHANNANQALDRI
CHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHH
MHLVPESKHQQLLFDLSLNLRGIVAQQLVPKVDGTGRRAAIEVLINTPRVASLIAKNELH
HHHCCCCCHHEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHHHHH
LLKETMAKSNEQGMQTFDQALLQLYIDGEISYADALHHADSPNDLRLMIKLQNKEPTSSS
HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCHH
FMEGVTLDMD
HHCCEEECCC
>Mature Secondary Structure
MDVRPFLKVMVERKASDLFITAGFPPSAKIDGELRPLAESAFTPAQSLDFVESVMTEAQK
CCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
KEFHSTRECNFAFAVKDLGRFRVSAFWQRESPGCVMRRIETKIPEVEDLKLPPILKDLVM
HHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHH
SKRGLIIMVGGTGTGKSTSLAALVGYRNAHARGHILTIEDPVEFVHDHRKSIITQREVGI
CCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCC
DTESFDAALKSSLRQAPDVILIGEIRTQETMEFALSFAETGHLCMATLHANNANQALDRI
CHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHH
MHLVPESKHQQLLFDLSLNLRGIVAQQLVPKVDGTGRRAAIEVLINTPRVASLIAKNELH
HHHCCCCCHHEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHHHHH
LLKETMAKSNEQGMQTFDQALLQLYIDGEISYADALHHADSPNDLRLMIKLQNKEPTSSS
HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCHH
FMEGVTLDMD
HHCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1676385; 10984043 [H]