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The map label for this gene is yceJ [H]

Identifier: 117919627

GI number: 117919627

Start: 1387037

End: 1387588

Strand: Direct

Name: yceJ [H]

Synonym: Shewana3_1178

Alternate gene names: 117919627

Gene position: 1387037-1387588 (Clockwise)

Preceding gene: 117919626

Following gene: 117919628

Centisome position: 27.9

GC content: 45.29

Gene sequence:

>552_bases
ATGTTTAGAAATACTAAGTTGAATTATGGACTTATTGCTATTGCCAGCCATTGGCTAAGTGCGGTTGTGGTGATTGGACT
CTTTGCCGTCGGTGTGTGGATGGTGGAATTGACCTACTACAGTGCATGGTACAAAACGGCGCCACATTGGCATAAAAGCA
TTGGAGTTTTGCTGCTGGCGGTAACCCTGTTTCGTTTAGTTTGGCGTTTGGTTAATCCAAAGCCCGCTCCTGAGCAAAAT
CACCAGACATGGGAAAAGGTTAGCGCCCACATTGCCCATGGCGCGATTTACCTCTTATTACTAGTGATTATGGCCGCAGG
TATTTTGATTTCGACGGCAGAGGGCCGTGGAATTATGGTGTTTGACTGGTTTGAGTTACCCGGCCTAACGCCACTGATTG
AAAATCAGGCTGATATCGCGGGGGATATTCATCAATATGCCGCCTACAGCTTGATTGCTCTGGTTTTACTGCATGCGTTA
GGCGCGTTAAAGCACCATTTTATCGATAAAGATTCAACACTACTCAAGATGATTAAATTTAACCGAGGATAA

Upstream 100 bases:

>100_bases
ATATGAGCGATTTTTACTGATTTTAGTTTTTAATTTTCGTTTTATGATAATGACTATTATTTGATTGTGCGACTTAAGTG
CAGAGGTGTGGGGTAGCTAT

Downstream 100 bases:

>100_bases
TATAATGAAAAAACAACTATTAGCTGCTTTGATTGGTGGGTCTTTACTGGCTCCAATGGCTGCATCTGCCGCCGATTATG
TAATTGACCGCGAAGGTGCT

Product: cytochrome B561

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MFRNTKLNYGLIAIASHWLSAVVVIGLFAVGVWMVELTYYSAWYKTAPHWHKSIGVLLLAVTLFRLVWRLVNPKPAPEQN
HQTWEKVSAHIAHGAIYLLLLVIMAAGILISTAEGRGIMVFDWFELPGLTPLIENQADIAGDIHQYAAYSLIALVLLHAL
GALKHHFIDKDSTLLKMIKFNRG

Sequences:

>Translated_183_residues
MFRNTKLNYGLIAIASHWLSAVVVIGLFAVGVWMVELTYYSAWYKTAPHWHKSIGVLLLAVTLFRLVWRLVNPKPAPEQN
HQTWEKVSAHIAHGAIYLLLLVIMAAGILISTAEGRGIMVFDWFELPGLTPLIENQADIAGDIHQYAAYSLIALVLLHAL
GALKHHFIDKDSTLLKMIKFNRG
>Mature_183_residues
MFRNTKLNYGLIAIASHWLSAVVVIGLFAVGVWMVELTYYSAWYKTAPHWHKSIGVLLLAVTLFRLVWRLVNPKPAPEQN
HQTWEKVSAHIAHGAIYLLLLVIMAAGILISTAEGRGIMVFDWFELPGLTPLIENQADIAGDIHQYAAYSLIALVLLHAL
GALKHHFIDKDSTLLKMIKFNRG

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI1787296, Length=177, Percent_Identity=47.4576271186441, Blast_Score=176, Evalue=6e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 20523; Mature: 20523

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRNTKLNYGLIAIASHWLSAVVVIGLFAVGVWMVELTYYSAWYKTAPHWHKSIGVLLLA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VTLFRLVWRLVNPKPAPEQNHQTWEKVSAHIAHGAIYLLLLVIMAAGILISTAEGRGIMV
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEE
FDWFELPGLTPLIENQADIAGDIHQYAAYSLIALVLLHALGALKHHFIDKDSTLLKMIKF
EECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
NRG
CCC
>Mature Secondary Structure
MFRNTKLNYGLIAIASHWLSAVVVIGLFAVGVWMVELTYYSAWYKTAPHWHKSIGVLLLA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VTLFRLVWRLVNPKPAPEQNHQTWEKVSAHIAHGAIYLLLLVIMAAGILISTAEGRGIMV
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEE
FDWFELPGLTPLIENQADIAGDIHQYAAYSLIALVLLHALGALKHHFIDKDSTLLKMIKF
EECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
NRG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]