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The map label for this gene is 117919623

Identifier: 117919623

GI number: 117919623

Start: 1384165

End: 1384713

Strand: Direct

Name: 117919623

Synonym: Shewana3_1174

Alternate gene names: NA

Gene position: 1384165-1384713 (Clockwise)

Preceding gene: 117919622

Following gene: 117919624

Centisome position: 27.84

GC content: 48.27

Gene sequence:

>549_bases
ATGCGATTGCTAAAGCTTAACTGGGGTAAGCCTATTGTCTTAGGCTTGTTGATGGCCAGTCTTTTGACTAGCTGCTCCAG
CGTCGATGTGAGTGACTATCGAGGCACTAATCCCCCCTTAGTGTTAGAAAGCTTCTTTAATGGCCCGCTTAAGGCATCGG
GCATTGTTGAGAACTTCAGTGGCAAAGTGATACGTCGGTTTAATGTCACCATGGAGGCGAGTTGGCTGGGGACGGAAGGC
ATTATCAAAGAGTGGTTTATCTATGATGATGGCGAAACCCAAACTCGCATTTGGCGCATTCAATCCCAAGGGGAAGGGCA
ATACACTGGCAGGGCTGACGATATTATCGGTACTGCGCAAGGGGAGGCGAGCGGGAGTGCGCTGCGTTGGCGCTACGATA
TGCTACTACCCGTCGATGGTGATGAATACCAAGTACACTTTGATGATTGGATGTACTTAGTGAACGACAATACCATTATT
AACCAAAGCGATATTATTAAATGGGGCGTCACTGTCGCCAAAGTGACCTTAGTGATCCAAAAGCGCTAG

Upstream 100 bases:

>100_bases
TTATCGAAGAGCCCAAATTAGCCGAAGCTTTTCTGGCGATTTGGTTATCGACCAATACCAGCCAGCCAACCTTAAGGGCG
CAATTATTGGGAGAAAAATC

Downstream 100 bases:

>100_bases
TATTTTGCTGTCGAGTTAACGGTATAGCTTGGCTAATAATCCAGCGTTTCATGCTTTAGACTGGGTGAAATAAATCAATC
TTAAATGAGTTTTACGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: Conserved Protein; GABA Permease

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MRLLKLNWGKPIVLGLLMASLLTSCSSVDVSDYRGTNPPLVLESFFNGPLKASGIVENFSGKVIRRFNVTMEASWLGTEG
IIKEWFIYDDGETQTRIWRIQSQGEGQYTGRADDIIGTAQGEASGSALRWRYDMLLPVDGDEYQVHFDDWMYLVNDNTII
NQSDIIKWGVTVAKVTLVIQKR

Sequences:

>Translated_182_residues
MRLLKLNWGKPIVLGLLMASLLTSCSSVDVSDYRGTNPPLVLESFFNGPLKASGIVENFSGKVIRRFNVTMEASWLGTEG
IIKEWFIYDDGETQTRIWRIQSQGEGQYTGRADDIIGTAQGEASGSALRWRYDMLLPVDGDEYQVHFDDWMYLVNDNTII
NQSDIIKWGVTVAKVTLVIQKR
>Mature_182_residues
MRLLKLNWGKPIVLGLLMASLLTSCSSVDVSDYRGTNPPLVLESFFNGPLKASGIVENFSGKVIRRFNVTMEASWLGTEG
IIKEWFIYDDGETQTRIWRIQSQGEGQYTGRADDIIGTAQGEASGSALRWRYDMLLPVDGDEYQVHFDDWMYLVNDNTII
NQSDIIKWGVTVAKVTLVIQKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20541; Mature: 20541

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLKLNWGKPIVLGLLMASLLTSCSSVDVSDYRGTNPPLVLESFFNGPLKASGIVENFS
CEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCCEEEEHHCCCCCCCCCEEECCC
GKVIRRFNVTMEASWLGTEGIIKEWFIYDDGETQTRIWRIQSQGEGQYTGRADDIIGTAQ
CCEEEEEEEEEEEEECCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEECC
GEASGSALRWRYDMLLPVDGDEYQVHFDDWMYLVNDNTIINQSDIIKWGVTVAKVTLVIQ
CCCCCCEEEEEEEEEEECCCCCEEEEECCEEEEECCCEEECCCCEEECCEEEEEEEEEEE
KR
CC
>Mature Secondary Structure
MRLLKLNWGKPIVLGLLMASLLTSCSSVDVSDYRGTNPPLVLESFFNGPLKASGIVENFS
CEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCCEEEEHHCCCCCCCCCEEECCC
GKVIRRFNVTMEASWLGTEGIIKEWFIYDDGETQTRIWRIQSQGEGQYTGRADDIIGTAQ
CCEEEEEEEEEEEEECCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEECC
GEASGSALRWRYDMLLPVDGDEYQVHFDDWMYLVNDNTIINQSDIIKWGVTVAKVTLVIQ
CCCCCCEEEEEEEEEEECCCCCEEEEECCEEEEECCCEEECCCCEEECCEEEEEEEEEEE
KR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA