Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

Click here to switch to the map view.

The map label for this gene is ylbG [H]

Identifier: 117919562

GI number: 117919562

Start: 1312426

End: 1312629

Strand: Direct

Name: ylbG [H]

Synonym: Shewana3_1113

Alternate gene names: 117919562

Gene position: 1312426-1312629 (Clockwise)

Preceding gene: 117919561

Following gene: 117919563

Centisome position: 26.4

GC content: 45.59

Gene sequence:

>204_bases
TTGCAGCCCAGAAGAACACTGTACCTCAAGAATCGTGTTGATGATGTAACTGAAAATGCTGTCTTAACACATGCTATCGT
ATTTCCTGCCCATGGGCAGTCTCGCTCTAGTAACGAGCTTCGAAAACAAGGGATATTTGTCTCCGCCAGTGGCGTGAGCT
CCATTTGGTTACTGCATGGCTTAGAGAACTTCAAAAGCGATTAG

Upstream 100 bases:

>100_bases
ATATAGCTATTTGGGGGGGCGGTTACTGAGTGTTTGGCGACTGAAGGTGAATAGTTGTAAAGAGAAGGTCAGCAATCCAG
CTGGCCTTCTTTTTTGGGGA

Downstream 100 bases:

>100_bases
AAGCCCTCGAAGCCAAAGTCGAGCCAGAAGGGATAATCCTTTCGGATGAACAAGTTGCCGCCCTTGAGTGTAAACGGCAA
AAGGATGAAGCCTATGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MQPRRTLYLKNRVDDVTENAVLTHAIVFPAHGQSRSSNELRKQGIFVSASGVSSIWLLHGLENFKSD

Sequences:

>Translated_67_residues
MQPRRTLYLKNRVDDVTENAVLTHAIVFPAHGQSRSSNELRKQGIFVSASGVSSIWLLHGLENFKSD
>Mature_67_residues
MQPRRTLYLKNRVDDVTENAVLTHAIVFPAHGQSRSSNELRKQGIFVSASGVSSIWLLHGLENFKSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7524; Mature: 7524

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPRRTLYLKNRVDDVTENAVLTHAIVFPAHGQSRSSNELRKQGIFVSASGVSSIWLLHG
CCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHCCEEEEECCCHHHHHHHC
LENFKSD
HHHCCCC
>Mature Secondary Structure
MQPRRTLYLKNRVDDVTENAVLTHAIVFPAHGQSRSSNELRKQGIFVSASGVSSIWLLHG
CCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHCCEEEEECCCHHHHHHHC
LENFKSD
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]