| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117919524
Identifier: 117919524
GI number: 117919524
Start: 1260946
End: 1261374
Strand: Direct
Name: 117919524
Synonym: Shewana3_1075
Alternate gene names: NA
Gene position: 1260946-1261374 (Clockwise)
Preceding gene: 117919522
Following gene: 117919526
Centisome position: 25.36
GC content: 49.42
Gene sequence:
>429_bases ATGGCGGATAAAGTCGTTGAAGTCACCACACATATGGGAAGCGGTTGGAAGGTTACGGCGCAGGTACGTGAGCATTTGCT GATTATCGATCAACCCAGCGCGACCAATGAAGGCGCTAATCCCTTAGAGACCTTTTTATTTTCGCTCGGAGGCTGCATCT CGGCGATTGCTAAGATGGTTGCGCGTGAGCGCAATATCACCATTCACCAGTTCGATGTGCATGTCAGAGCCGTGATGAAT TCGGCGGGATTACTAGGCCAGCCTTCGGATGATCCTGTGGGGTTTAAAGAAATTGCCATCAATGCCAGCATTGATGCTGA CTTAACCGATGCACAAAAGAGCGAGTTTTTAGATACCGTGTGTAACCGTTGTCCTGTCCACGACAATCTGCTGCGTCCAA GCTTAGTCACTCACCAAGTTCAGCACTAA
Upstream 100 bases:
>100_bases ACAAAACGAGTTAGGCCATAAAACTGTGATCTTAAGTTGTGACTTTTGGTTTTTTAATTATTAGGATTATCTGATTGAAA AAAAACTAATGGAGTAAGTC
Downstream 100 bases:
>100_bases TCTCAAGATTAATTTCGATAGCGGCTTAAAAGCATAAACCCCAGAGTTTGCTGGGGTTTATGTCAATGATTATCAGCTAG TCGCACTATCACGCATTATT
Product: OsmC family protein
Products: NA
Alternate protein names: OsmC-Like Protein; OsmC-Like Protein Superfamily Protein; Redox Protein Regulator Of Disulfide Bond Formation
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MADKVVEVTTHMGSGWKVTAQVREHLLIIDQPSATNEGANPLETFLFSLGGCISAIAKMVARERNITIHQFDVHVRAVMN SAGLLGQPSDDPVGFKEIAINASIDADLTDAQKSEFLDTVCNRCPVHDNLLRPSLVTHQVQH
Sequences:
>Translated_142_residues MADKVVEVTTHMGSGWKVTAQVREHLLIIDQPSATNEGANPLETFLFSLGGCISAIAKMVARERNITIHQFDVHVRAVMN SAGLLGQPSDDPVGFKEIAINASIDADLTDAQKSEFLDTVCNRCPVHDNLLRPSLVTHQVQH >Mature_141_residues ADKVVEVTTHMGSGWKVTAQVREHLLIIDQPSATNEGANPLETFLFSLGGCISAIAKMVARERNITIHQFDVHVRAVMNS AGLLGQPSDDPVGFKEIAINASIDADLTDAQKSEFLDTVCNRCPVHDNLLRPSLVTHQVQH
Specific function: Unknown
COG id: COG1765
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15484; Mature: 15353
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKVVEVTTHMGSGWKVTAQVREHLLIIDQPSATNEGANPLETFLFSLGGCISAIAKMV CCCCCEEEEECCCCCEEEEHHHHHCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ARERNITIHQFDVHVRAVMNSAGLLGQPSDDPVGFKEIAINASIDADLTDAQKSEFLDTV HHHCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHEEECCCCCCCCCHHHHHHHHHHH CNRCPVHDNLLRPSLVTHQVQH HHCCCCCCCCCCCHHHHHCCCC >Mature Secondary Structure ADKVVEVTTHMGSGWKVTAQVREHLLIIDQPSATNEGANPLETFLFSLGGCISAIAKMV CCCCEEEEECCCCCEEEEHHHHHCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ARERNITIHQFDVHVRAVMNSAGLLGQPSDDPVGFKEIAINASIDADLTDAQKSEFLDTV HHHCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHEEECCCCCCCCCHHHHHHHHHHH CNRCPVHDNLLRPSLVTHQVQH HHCCCCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA