| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117919496
Identifier: 117919496
GI number: 117919496
Start: 1224809
End: 1225810
Strand: Direct
Name: 117919496
Synonym: Shewana3_1047
Alternate gene names: NA
Gene position: 1224809-1225810 (Clockwise)
Preceding gene: 117919495
Following gene: 117919498
Centisome position: 24.63
GC content: 53.29
Gene sequence:
>1002_bases ATGGACTACCAGCGACTGACTTTGACTTCCCCTGCATCCCAACACTCGGCGCCAACGCCTGCACAAACTTCCTTCTATAT TCCGTACCGAGATGGACAGCTGCATCTGCGTCAGTTGTTGCCTGCCAATGCGGATTTTTCGAAGCCACCGATCCTTATGT TGCATGGTGCCATGTCCAATGGCCGGGTATTTTACAGCCAAAGTGGTCGAGGCTTAGGATGTTTTCTCGCTCAGGCGGGC TTTGTGGTTTATGTGCTGGATACGGCGGGCAGGGGTATGAGTCTGCCCAAAATTGCGCGTGGCTTTACTCTGGGGCAAGG GGAGGTGATCCGCGAGCAGCTGCCATTAGTGCAGCAGTCTATTTTGACTATGCATCAACAGCTTTGCCAAGAACAGGGAA AGCCTGCACCATCGCAGCTGCATTGGTGTGCGCATTCTTGGGGCGGCGTGTTGATGGCAAGCGCCTTAGCGCGTTATCCC GAATTGCAGCAGAGTGTGCGGTCGCTGCTGACCTTTGGCAGTAAACGCACGATTCGAGTGAAGTCCTTTAAAAAATGGTT GATGGTCGATGTGTTTTGGAATCGCCTCGCCCCAAGTTTAGCCGTGGGGCAGGGGTATCTCGCCGCCGATAAGCTGCGTG TCGGTATGGATAACGAGAGCCGCGCCTCGTTAACTCAAAGCATAGATTGGGTGCGTGGAGAGTGGCTCGACCATGATGAT GGCTTCGATTATGGCAAGGCGGCGAAGGCGGCTAACTGGCCCATCGCGTGGTTTATTGCTGGGCAAAACGATACTGTGCT CGGGCATCCCGAAGATGTCGCCGATATGATCTCTGAGTGTGGTTTTCGCCAAGTGAAATACACTCTGCTCTCAAAGGCGA ACGGCTTTAAACACGACTATGGTCATGCGGATATGCTGACCCATCTGGATGCGATGGGTGACCATTTTCCGCTGATCCGC GATTGGTATCTCGGGTTTGAATTGGCAGTGTTAAAAGACTAG
Upstream 100 bases:
>100_bases TATCTGCTGCAGTTTTAATTCATCCTCTGTATCCGAGTCGTTAACATTAGAGTAATGACTCTTGTTTTTTGACGCTTAGC TGGTAGTTTAGTGTTCATTA
Downstream 100 bases:
>100_bases GGCGATGCCCCCCTAGTTTATTTTTGCAGAGCAGGGTAGCGCAGCTCTACCTCTTGGGTGATATCGAGTAGCTCACCAAC ACCGATAATCCGCCAGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Esterase/Lipase; Esterase/Lipase/Thioesterase Family Protein; Alpha/Beta Fold Family Hydrolase; Esterase; Alpha/Beta Hydrolase Fold Protein
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MDYQRLTLTSPASQHSAPTPAQTSFYIPYRDGQLHLRQLLPANADFSKPPILMLHGAMSNGRVFYSQSGRGLGCFLAQAG FVVYVLDTAGRGMSLPKIARGFTLGQGEVIREQLPLVQQSILTMHQQLCQEQGKPAPSQLHWCAHSWGGVLMASALARYP ELQQSVRSLLTFGSKRTIRVKSFKKWLMVDVFWNRLAPSLAVGQGYLAADKLRVGMDNESRASLTQSIDWVRGEWLDHDD GFDYGKAAKAANWPIAWFIAGQNDTVLGHPEDVADMISECGFRQVKYTLLSKANGFKHDYGHADMLTHLDAMGDHFPLIR DWYLGFELAVLKD
Sequences:
>Translated_333_residues MDYQRLTLTSPASQHSAPTPAQTSFYIPYRDGQLHLRQLLPANADFSKPPILMLHGAMSNGRVFYSQSGRGLGCFLAQAG FVVYVLDTAGRGMSLPKIARGFTLGQGEVIREQLPLVQQSILTMHQQLCQEQGKPAPSQLHWCAHSWGGVLMASALARYP ELQQSVRSLLTFGSKRTIRVKSFKKWLMVDVFWNRLAPSLAVGQGYLAADKLRVGMDNESRASLTQSIDWVRGEWLDHDD GFDYGKAAKAANWPIAWFIAGQNDTVLGHPEDVADMISECGFRQVKYTLLSKANGFKHDYGHADMLTHLDAMGDHFPLIR DWYLGFELAVLKD >Mature_333_residues MDYQRLTLTSPASQHSAPTPAQTSFYIPYRDGQLHLRQLLPANADFSKPPILMLHGAMSNGRVFYSQSGRGLGCFLAQAG FVVYVLDTAGRGMSLPKIARGFTLGQGEVIREQLPLVQQSILTMHQQLCQEQGKPAPSQLHWCAHSWGGVLMASALARYP ELQQSVRSLLTFGSKRTIRVKSFKKWLMVDVFWNRLAPSLAVGQGYLAADKLRVGMDNESRASLTQSIDWVRGEWLDHDD GFDYGKAAKAANWPIAWFIAGQNDTVLGHPEDVADMISECGFRQVKYTLLSKANGFKHDYGHADMLTHLDAMGDHFPLIR DWYLGFELAVLKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37172; Mature: 37172
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYQRLTLTSPASQHSAPTPAQTSFYIPYRDGQLHLRQLLPANADFSKPPILMLHGAMSN CCCCEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCEEEEECCCCC GRVFYSQSGRGLGCFLAQAGFVVYVLDTAGRGMSLPKIARGFTLGQGEVIREQLPLVQQS CEEEEECCCCCCEEHEECCCEEEEEEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHH ILTMHQQLCQEQGKPAPSQLHWCAHSWGGVLMASALARYPELQQSVRSLLTFGSKRTIRV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEH KSFKKWLMVDVFWNRLAPSLAVGQGYLAADKLRVGMDNESRASLTQSIDWVRGEWLDHDD HHHHHHHHHHHHHHHHCCHHHHCCCCEEHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCC GFDYGKAAKAANWPIAWFIAGQNDTVLGHPEDVADMISECGFRQVKYTLLSKANGFKHDY CCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC GHADMLTHLDAMGDHFPLIRDWYLGFELAVLKD CCHHHHHHHHHCCCCCCHHHHHHCCEEEEEECC >Mature Secondary Structure MDYQRLTLTSPASQHSAPTPAQTSFYIPYRDGQLHLRQLLPANADFSKPPILMLHGAMSN CCCCEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCEEEEECCCCC GRVFYSQSGRGLGCFLAQAGFVVYVLDTAGRGMSLPKIARGFTLGQGEVIREQLPLVQQS CEEEEECCCCCCEEHEECCCEEEEEEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHH ILTMHQQLCQEQGKPAPSQLHWCAHSWGGVLMASALARYPELQQSVRSLLTFGSKRTIRV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEH KSFKKWLMVDVFWNRLAPSLAVGQGYLAADKLRVGMDNESRASLTQSIDWVRGEWLDHDD HHHHHHHHHHHHHHHHCCHHHHCCCCEEHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCC GFDYGKAAKAANWPIAWFIAGQNDTVLGHPEDVADMISECGFRQVKYTLLSKANGFKHDY CCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC GHADMLTHLDAMGDHFPLIRDWYLGFELAVLKD CCHHHHHHHHHCCCCCCHHHHHHCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA