| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117919255
Identifier: 117919255
GI number: 117919255
Start: 926008
End: 928281
Strand: Reverse
Name: 117919255
Synonym: Shewana3_0803
Alternate gene names: NA
Gene position: 928281-926008 (Counterclockwise)
Preceding gene: 117919257
Following gene: 117919251
Centisome position: 18.67
GC content: 48.11
Gene sequence:
>2274_bases ATGTCGTTGTTTCGCGCATTTAAAGCTAAGTTATTTAATGCAAAAAAGAATAGCTGCGCCCACCAAGACATACCTCTTCA AACCTCTCCCAATCCCGCTCCACTCCCATCCAGTACGTTCAAACCTTATTTTAGTCTTGCCATTCAAGCGACTCCGGCGC AAGCCACTCATTCAGACACCCACGAAGAGTTTACCCGCCACTACTTCGACAGCCCGCAAACGATCGAGCTGCTCGGTTGG GAACGAGAGCATGAATCCTGCACCTTCCACGAGAACCAATTTGACCGCATAGAGATACACGGCCCAGTGCAAGATTTTTA TCTCGGTCAGGATAAGACCTGTAGCCTAGAGCAAGATGCTGATGCTGATGCTGATGCGAACCAAGCCCGTTGGCAAGTGG CACTGGTAAACCCGCAGGAATTAGTGATCTGCCGTTTTTATATCGATGCAGGGTACAGAGTACAAGGCGATATGCAGGAC TTCGGCAGTCTCACTGGCAAACTGCAACGGACATTCCACCAGATTGAGACCGAGCAAGGTCAGAATCTACTCAGAATTGT CACCCAATCCCCCAACCTCACTCAGGCAGTCGATTGTAATTACTTTGGTGAGCGCAACGGCATCACTCGCCAATTCAATG CCTTAGGTGTATTGCAGTTCGAAGGACATTTTATTGAGGAACAGCAGCTCGGGCGCCAGACTTGGTATGACAATGAGGGC AAAATCAATCAAGTCGAGGAGCGCCACGCCGAAGGAATGTTACTAACCCGCTACTATAGCAATGGTCAGATAAAAGAAAC CGCCGAAAAGGATAGTGAAGATAATTATATCAATCAGTTAACTCGCTATTATGAATCAGGCGCCCTGTGGCTGATACGCC CCATGCAGGCGGGAAAAATCCATGGAACCGAGCATATCTACTATGAAGATGGCACGCTGCAGGCCAAATTAAGCTATGAC ATGGGGGAATTGGTTAAAGAGCTTTGGTACCATACCAACGGCAATCTTAAACAAGAAGTCCATCTCGATGCAGCGGGCAA AAGCCTCGAAACCTATTACGAAGATGGCCAACTCGCCTGGCGAGAACGCCTCAATCCACAGGGGTTAAATTGCGGTTTAC GTCAGGAATGGCACCCCAATGGCTTGCTGGCAAATCAACTCAATTTTGTTGATGGCGTTGCCCATGGTAACAGCGAGAAA TGGTATTCGAACGGACAGCTTGAACAATGCATCCCCTTTGAAAATGGCCATGAGCAGGGTCTTGCTACTTGGTACCATGA AAATGGTCAACTCTCCCTTGAGATCTACCTTGAAAAGGGCTTAAGAGAAGGCCTTTTCCGCAGTTATTACGAAAGCGGCG TATTGTCAGCCGAGGGCCAATATCAGCGTAACCTCTCCATCGCGCCCTTTATCGAATACTATGAAAACCAGCAAATTCAA ATGTATTTGCCCCACACTCAAGGCAATCGCGATGGCACGGCCCGCTGGTTTTATGAAGACGGTACCATCAAGACGATTGC TGAATATGTTGTCCGCGATGGCCAAGGTTACCTTAAGGAACGCTCCTCCTATAACAAACAAGGTGTTCTCGAATCCTTTG AGAGCCACTCCAACACCCGTTGCGGCTACCATCTTGAGGATAATCAACGGGAATATTATCAAACGGGTCACCCTGACACT CGCATCGAATACTATGAGGATGGGGCTATCCGTTGGCTGCTCACTCGCCTAGACGAGAACCTATTCAGCTCAAAAGCCTT TTCAAAACAAGGCGAATTGCTCGAGTCAGGCTTTGTAAAAGTGATAGAAAACGATTATCAGGATGTCGGCCACTGGCAAC TTTTTACAGCTCAAGGCCAGTTACAACGCGAAGCCTGGCTCAGCGACGATGGCAAGCTCAATGAAACCCGCCACTATTTT GATGCTACCGAGCAGGAACAGACGGTAGCAACGGAAACCTGCGGCGATGACAGCAACATTGTCGAAGCAATGGCTCGGGC CAATGATGCGAAGGAGCCTCAAACCTCGGCGCCTATCCTCAGCTACCATTTAAAATTTGACCCAGATAGCCAACTCTATG CCATGAAACGCTATCATCCGAATCGTCAAATCGCCGAAGAAGGCAACTTACTTTTTCAGGGGCAAGAACACTTTTGGGTG GGGATCCACAATCAGTACGATAAACAAGGCCAGCTCGAATTATCCGAAACCTATACTATGAGTGGTGAACCGATAGAACA GACAACAAGGTCAAATACCATTCGTTTAAATTAA
Upstream 100 bases:
>100_bases ACCAAAGTATAAACCGTTATCATAGGCGCTCTTAGGGCTAAGAGCCTTATGAGATGACAAAAAAGATCGTTGTATCATAT GGATATGGAGAAGTTGACCT
Downstream 100 bases:
>100_bases CTAGTTTTACAGAAAACTAAGGATGACTAGATGTGCAATCATATGGGCACCAATTGCGCACTCTAAACCTCGCTTCCAAT ACAAGTAGCCAGCGATCAAG
Product: MORN repeat-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 757; Mature: 756
Protein sequence:
>757_residues MSLFRAFKAKLFNAKKNSCAHQDIPLQTSPNPAPLPSSTFKPYFSLAIQATPAQATHSDTHEEFTRHYFDSPQTIELLGW EREHESCTFHENQFDRIEIHGPVQDFYLGQDKTCSLEQDADADADANQARWQVALVNPQELVICRFYIDAGYRVQGDMQD FGSLTGKLQRTFHQIETEQGQNLLRIVTQSPNLTQAVDCNYFGERNGITRQFNALGVLQFEGHFIEEQQLGRQTWYDNEG KINQVEERHAEGMLLTRYYSNGQIKETAEKDSEDNYINQLTRYYESGALWLIRPMQAGKIHGTEHIYYEDGTLQAKLSYD MGELVKELWYHTNGNLKQEVHLDAAGKSLETYYEDGQLAWRERLNPQGLNCGLRQEWHPNGLLANQLNFVDGVAHGNSEK WYSNGQLEQCIPFENGHEQGLATWYHENGQLSLEIYLEKGLREGLFRSYYESGVLSAEGQYQRNLSIAPFIEYYENQQIQ MYLPHTQGNRDGTARWFYEDGTIKTIAEYVVRDGQGYLKERSSYNKQGVLESFESHSNTRCGYHLEDNQREYYQTGHPDT RIEYYEDGAIRWLLTRLDENLFSSKAFSKQGELLESGFVKVIENDYQDVGHWQLFTAQGQLQREAWLSDDGKLNETRHYF DATEQEQTVATETCGDDSNIVEAMARANDAKEPQTSAPILSYHLKFDPDSQLYAMKRYHPNRQIAEEGNLLFQGQEHFWV GIHNQYDKQGQLELSETYTMSGEPIEQTTRSNTIRLN
Sequences:
>Translated_757_residues MSLFRAFKAKLFNAKKNSCAHQDIPLQTSPNPAPLPSSTFKPYFSLAIQATPAQATHSDTHEEFTRHYFDSPQTIELLGW EREHESCTFHENQFDRIEIHGPVQDFYLGQDKTCSLEQDADADADANQARWQVALVNPQELVICRFYIDAGYRVQGDMQD FGSLTGKLQRTFHQIETEQGQNLLRIVTQSPNLTQAVDCNYFGERNGITRQFNALGVLQFEGHFIEEQQLGRQTWYDNEG KINQVEERHAEGMLLTRYYSNGQIKETAEKDSEDNYINQLTRYYESGALWLIRPMQAGKIHGTEHIYYEDGTLQAKLSYD MGELVKELWYHTNGNLKQEVHLDAAGKSLETYYEDGQLAWRERLNPQGLNCGLRQEWHPNGLLANQLNFVDGVAHGNSEK WYSNGQLEQCIPFENGHEQGLATWYHENGQLSLEIYLEKGLREGLFRSYYESGVLSAEGQYQRNLSIAPFIEYYENQQIQ MYLPHTQGNRDGTARWFYEDGTIKTIAEYVVRDGQGYLKERSSYNKQGVLESFESHSNTRCGYHLEDNQREYYQTGHPDT RIEYYEDGAIRWLLTRLDENLFSSKAFSKQGELLESGFVKVIENDYQDVGHWQLFTAQGQLQREAWLSDDGKLNETRHYF DATEQEQTVATETCGDDSNIVEAMARANDAKEPQTSAPILSYHLKFDPDSQLYAMKRYHPNRQIAEEGNLLFQGQEHFWV GIHNQYDKQGQLELSETYTMSGEPIEQTTRSNTIRLN >Mature_756_residues SLFRAFKAKLFNAKKNSCAHQDIPLQTSPNPAPLPSSTFKPYFSLAIQATPAQATHSDTHEEFTRHYFDSPQTIELLGWE REHESCTFHENQFDRIEIHGPVQDFYLGQDKTCSLEQDADADADANQARWQVALVNPQELVICRFYIDAGYRVQGDMQDF GSLTGKLQRTFHQIETEQGQNLLRIVTQSPNLTQAVDCNYFGERNGITRQFNALGVLQFEGHFIEEQQLGRQTWYDNEGK INQVEERHAEGMLLTRYYSNGQIKETAEKDSEDNYINQLTRYYESGALWLIRPMQAGKIHGTEHIYYEDGTLQAKLSYDM GELVKELWYHTNGNLKQEVHLDAAGKSLETYYEDGQLAWRERLNPQGLNCGLRQEWHPNGLLANQLNFVDGVAHGNSEKW YSNGQLEQCIPFENGHEQGLATWYHENGQLSLEIYLEKGLREGLFRSYYESGVLSAEGQYQRNLSIAPFIEYYENQQIQM YLPHTQGNRDGTARWFYEDGTIKTIAEYVVRDGQGYLKERSSYNKQGVLESFESHSNTRCGYHLEDNQREYYQTGHPDTR IEYYEDGAIRWLLTRLDENLFSSKAFSKQGELLESGFVKVIENDYQDVGHWQLFTAQGQLQREAWLSDDGKLNETRHYFD ATEQEQTVATETCGDDSNIVEAMARANDAKEPQTSAPILSYHLKFDPDSQLYAMKRYHPNRQIAEEGNLLFQGQEHFWVG IHNQYDKQGQLELSETYTMSGEPIEQTTRSNTIRLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87537; Mature: 87406
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFRAFKAKLFNAKKNSCAHQDIPLQTSPNPAPLPSSTFKPYFSLAIQATPAQATHSDT CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCH HEEFTRHYFDSPQTIELLGWEREHESCTFHENQFDRIEIHGPVQDFYLGQDKTCSLEQDA HHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCEEEEECCHHHHCCCCCCCCCCCCCC DADADANQARWQVALVNPQELVICRFYIDAGYRVQGDMQDFGSLTGKLQRTFHQIETEQG CCCCCCCCCEEEEEEECCCEEEEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHCC QNLLRIVTQSPNLTQAVDCNYFGERNGITRQFNALGVLQFEGHFIEEQQLGRQTWYDNEG CCEEEEEECCCCCCEEECCCCCCCCCCCCEECCEEEEEEECCCEECHHHHCHHCCCCCCC KINQVEERHAEGMLLTRYYSNGQIKETAEKDSEDNYINQLTRYYESGALWLIRPMQAGKI CCHHHHHHHCCCEEEEEEECCCCEEHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCC HGTEHIYYEDGTLQAKLSYDMGELVKELWYHTNGNLKQEVHLDAAGKSLETYYEDGQLAW CCCEEEEEECCEEEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHCCCCHHH RERLNPQGLNCGLRQEWHPNGLLANQLNFVDGVAHGNSEKWYSNGQLEQCIPFENGHEQG HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCHHCCCCCCCCCCCC LATWYHENGQLSLEIYLEKGLREGLFRSYYESGVLSAEGQYQRNLSIAPFIEYYENQQIQ CEEEEECCCEEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHCCCEEE MYLPHTQGNRDGTARWFYEDGTIKTIAEYVVRDGQGYLKERSSYNKQGVLESFESHSNTR EEECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCC CGYHLEDNQREYYQTGHPDTRIEYYEDGAIRWLLTRLDENLFSSKAFSKQGELLESGFVK CCEEECCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VIENDYQDVGHWQLFTAQGQLQREAWLSDDGKLNETRHYFDATEQEQTVATETCGDDSNI HHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHCCCCCHHH VEAMARANDAKEPQTSAPILSYHLKFDPDSQLYAMKRYHPNRQIAEEGNLLFQGQEHFWV HHHHHHCCCCCCCCCCCCEEEEEEEECCCCCEEEHHHCCCCCCHHHCCCEEEECCCEEEE GIHNQYDKQGQLELSETYTMSGEPIEQTTRSNTIRLN EECCCCCCCCCEEEEEEEECCCCCHHHHCCCCEEEEC >Mature Secondary Structure SLFRAFKAKLFNAKKNSCAHQDIPLQTSPNPAPLPSSTFKPYFSLAIQATPAQATHSDT CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCH HEEFTRHYFDSPQTIELLGWEREHESCTFHENQFDRIEIHGPVQDFYLGQDKTCSLEQDA HHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCEEEEECCHHHHCCCCCCCCCCCCCC DADADANQARWQVALVNPQELVICRFYIDAGYRVQGDMQDFGSLTGKLQRTFHQIETEQG CCCCCCCCCEEEEEEECCCEEEEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHCC QNLLRIVTQSPNLTQAVDCNYFGERNGITRQFNALGVLQFEGHFIEEQQLGRQTWYDNEG CCEEEEEECCCCCCEEECCCCCCCCCCCCEECCEEEEEEECCCEECHHHHCHHCCCCCCC KINQVEERHAEGMLLTRYYSNGQIKETAEKDSEDNYINQLTRYYESGALWLIRPMQAGKI CCHHHHHHHCCCEEEEEEECCCCEEHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCC HGTEHIYYEDGTLQAKLSYDMGELVKELWYHTNGNLKQEVHLDAAGKSLETYYEDGQLAW CCCEEEEEECCEEEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHCCCCHHH RERLNPQGLNCGLRQEWHPNGLLANQLNFVDGVAHGNSEKWYSNGQLEQCIPFENGHEQG HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCHHCCCCCCCCCCCC LATWYHENGQLSLEIYLEKGLREGLFRSYYESGVLSAEGQYQRNLSIAPFIEYYENQQIQ CEEEEECCCEEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHCCCEEE MYLPHTQGNRDGTARWFYEDGTIKTIAEYVVRDGQGYLKERSSYNKQGVLESFESHSNTR EEECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCC CGYHLEDNQREYYQTGHPDTRIEYYEDGAIRWLLTRLDENLFSSKAFSKQGELLESGFVK CCEEECCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VIENDYQDVGHWQLFTAQGQLQREAWLSDDGKLNETRHYFDATEQEQTVATETCGDDSNI HHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHCCCCCHHH VEAMARANDAKEPQTSAPILSYHLKFDPDSQLYAMKRYHPNRQIAEEGNLLFQGQEHFWV HHHHHHCCCCCCCCCCCCEEEEEEEECCCCCEEEHHHCCCCCCHHHCCCEEEECCCEEEE GIHNQYDKQGQLELSETYTMSGEPIEQTTRSNTIRLN EECCCCCCCCCEEEEEEEECCCCCHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA