Click here to switch to the map view.

The map label for this gene is 117919214

Identifier: 117919214

GI number: 117919214

Start: 883977

End: 884555

Strand: Reverse

Name: 117919214

Synonym: Shewana3_0762

Alternate gene names: NA

Gene position: 884555-883977 (Counterclockwise)

Preceding gene: 117919215

Following gene: 117919213

Centisome position: 17.79

GC content: 51.99

Gene sequence:

>579_bases
ATGTCCTTATCTAACGATCCCCGCGAGGCCAAACTCCAGCAATTGATTGATAATGCCCCCAAAGCATTAACCCCCGAACG
GGATCTTTGGCAAGGCATCGAAAAACGTATGGATAAGCCATTGGCGTCGCAAACGGCGAGTCGCCAAGCGCCGCGACCGC
AAGGTGCGCAATGGGCGATTGCCGCAGCTGTGGTGATGGCGGTGTTCTTCGGGTTCTACACTCAAGCGCCGATAAAAACG
TCGCTCCCTGAACAAATCGCTAGCCAATCGGCGGATGATGAGCAAGCGCTGCACACTCTGCTTAACCAAATTGCCCAGAC
ACATCAAGCCCAAGTCACGAGCCTCGAACAAACCCCAACGGTTGTCGCGTGGCAAACCAGTCGCTTTAGCGCGCCGCTAG
AGCAAGGCTTAGCAGAATTACGACGCGCAGGCGAACAGATTTATCAAGCGTTACAAGCTAATCCAACCGACAAACAACTT
TGGCAACTCTGGCTTTGGGTGCAACAACGTGAACTCGATTTGCTACAGCAAGGCCAAAAACTTCCGATTCAAAACTCAAC
ACAAGGAAATAGCATATGA

Upstream 100 bases:

>100_bases
GCTACCAACATGAAGAAATTGCACAATTACTTGGTATTGCCGTGGGAACCAGTAAGACCCAGTACCACAGAGCCAAGCAA
TTACTACAGGAGATGCTGTA

Downstream 100 bases:

>100_bases
GCCATTTTACCCTCACGAAAACCAGTCTCTTAGTGTCAACGCTTTATCTTGGCCTCATGGGCAGTGTATTTGCCGCTGAA
AGTGTGGATAAACAGTTACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MSLSNDPREAKLQQLIDNAPKALTPERDLWQGIEKRMDKPLASQTASRQAPRPQGAQWAIAAAVVMAVFFGFYTQAPIKT
SLPEQIASQSADDEQALHTLLNQIAQTHQAQVTSLEQTPTVVAWQTSRFSAPLEQGLAELRRAGEQIYQALQANPTDKQL
WQLWLWVQQRELDLLQQGQKLPIQNSTQGNSI

Sequences:

>Translated_192_residues
MSLSNDPREAKLQQLIDNAPKALTPERDLWQGIEKRMDKPLASQTASRQAPRPQGAQWAIAAAVVMAVFFGFYTQAPIKT
SLPEQIASQSADDEQALHTLLNQIAQTHQAQVTSLEQTPTVVAWQTSRFSAPLEQGLAELRRAGEQIYQALQANPTDKQL
WQLWLWVQQRELDLLQQGQKLPIQNSTQGNSI
>Mature_191_residues
SLSNDPREAKLQQLIDNAPKALTPERDLWQGIEKRMDKPLASQTASRQAPRPQGAQWAIAAAVVMAVFFGFYTQAPIKTS
LPEQIASQSADDEQALHTLLNQIAQTHQAQVTSLEQTPTVVAWQTSRFSAPLEQGLAELRRAGEQIYQALQANPTDKQLW
QLWLWVQQRELDLLQQGQKLPIQNSTQGNSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21492; Mature: 21361

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSNDPREAKLQQLIDNAPKALTPERDLWQGIEKRMDKPLASQTASRQAPRPQGAQWAI
CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHH
AAAVVMAVFFGFYTQAPIKTSLPEQIASQSADDEQALHTLLNQIAQTHQAQVTSLEQTPT
HHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VVAWQTSRFSAPLEQGLAELRRAGEQIYQALQANPTDKQLWQLWLWVQQRELDLLQQGQK
EEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
LPIQNSTQGNSI
CCCCCCCCCCCC
>Mature Secondary Structure 
SLSNDPREAKLQQLIDNAPKALTPERDLWQGIEKRMDKPLASQTASRQAPRPQGAQWAI
CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHH
AAAVVMAVFFGFYTQAPIKTSLPEQIASQSADDEQALHTLLNQIAQTHQAQVTSLEQTPT
HHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VVAWQTSRFSAPLEQGLAELRRAGEQIYQALQANPTDKQLWQLWLWVQQRELDLLQQGQK
EEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
LPIQNSTQGNSI
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA