| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117919208
Identifier: 117919208
GI number: 117919208
Start: 877644
End: 878144
Strand: Reverse
Name: 117919208
Synonym: Shewana3_0756
Alternate gene names: NA
Gene position: 878144-877644 (Counterclockwise)
Preceding gene: 117919209
Following gene: 117919205
Centisome position: 17.66
GC content: 46.91
Gene sequence:
>501_bases ATGTCGAAAAATATTGGCTTGAACGCCATCGAAATGAGCTACTTACGCCAATCACTCAGCCTCAGTGCGGCTCAAGTAGG ACAACTGACCAACCATAGCGAAGCCGAAGTATTAGCGTGGGAAAATGCTGAAACACAGGCCCCTGAACTGGCACAGAAAA AGCTGCTAGATCTCGATGATATTATCGAGATGCAAGTACTGAATACCACTGACGGCATCGAAGCCTTATTCAAGAAAGAG CCTAAGCGTCACCTAGCCTTCGTGGTGTATCCAACTCAAGCCGTTTACACCCAATATAATCCTGAATTTTTAAGCTCGCT GCCGTTGACTGAGCTATACAATACGGCGGCATGGCGCATTAAGAAAGAATGTAAACTGGTGCTCGAAGTAGATGTTAGCT TAGTCAATCTCGATGTCGAAGCCTACAAGGCATTCCGTGAGCAAAATGGGTTAAGCGAAAGCCGTGAAAGCCGCTCCAAA TGGGCGGCGACTCAGCTATAA
Upstream 100 bases:
>100_bases CTTATTGGGAATCCTTCTGGGAATGGGTCGAAGATATTTGGCTTAAAAACAAATACTGATTTTACCGAGATTTTATTTTT ATCAACTTGAGAACCGCATT
Downstream 100 bases:
>100_bases ACGCCTAAGGATTTAAGCAAAAAGGGCAGAAGTAAATCTTCTGCCCTTTTGTTTTTTATCGCTTTGTGCCAATTAAGCCT GCGCTGCGTTGGCCACGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSKNIGLNAIEMSYLRQSLSLSAAQVGQLTNHSEAEVLAWENAETQAPELAQKKLLDLDDIIEMQVLNTTDGIEALFKKE PKRHLAFVVYPTQAVYTQYNPEFLSSLPLTELYNTAAWRIKKECKLVLEVDVSLVNLDVEAYKAFREQNGLSESRESRSK WAATQL
Sequences:
>Translated_166_residues MSKNIGLNAIEMSYLRQSLSLSAAQVGQLTNHSEAEVLAWENAETQAPELAQKKLLDLDDIIEMQVLNTTDGIEALFKKE PKRHLAFVVYPTQAVYTQYNPEFLSSLPLTELYNTAAWRIKKECKLVLEVDVSLVNLDVEAYKAFREQNGLSESRESRSK WAATQL >Mature_165_residues SKNIGLNAIEMSYLRQSLSLSAAQVGQLTNHSEAEVLAWENAETQAPELAQKKLLDLDDIIEMQVLNTTDGIEALFKKEP KRHLAFVVYPTQAVYTQYNPEFLSSLPLTELYNTAAWRIKKECKLVLEVDVSLVNLDVEAYKAFREQNGLSESRESRSKW AATQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18793; Mature: 18661
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNIGLNAIEMSYLRQSLSLSAAQVGQLTNHSEAEVLAWENAETQAPELAQKKLLDLDD CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHCCHHH IIEMQVLNTTDGIEALFKKEPKRHLAFVVYPTQAVYTQYNPEFLSSLPLTELYNTAAWRI HHHHHEECCCHHHHHHHHCCCCCEEEEEEECCHHEEECCCHHHHHHCCHHHHHHHHHHHH KKECKLVLEVDVSLVNLDVEAYKAFREQNGLSESRESRSKWAATQL HHHCEEEEEECEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SKNIGLNAIEMSYLRQSLSLSAAQVGQLTNHSEAEVLAWENAETQAPELAQKKLLDLDD CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHCCHHH IIEMQVLNTTDGIEALFKKEPKRHLAFVVYPTQAVYTQYNPEFLSSLPLTELYNTAAWRI HHHHHEECCCHHHHHHHHCCCCCEEEEEEECCHHEEECCCHHHHHHCCHHHHHHHHHHHH KKECKLVLEVDVSLVNLDVEAYKAFREQNGLSESRESRSKWAATQL HHHCEEEEEECEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA