Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

Click here to switch to the map view.

The map label for this gene is 117919208

Identifier: 117919208

GI number: 117919208

Start: 877644

End: 878144

Strand: Reverse

Name: 117919208

Synonym: Shewana3_0756

Alternate gene names: NA

Gene position: 878144-877644 (Counterclockwise)

Preceding gene: 117919209

Following gene: 117919205

Centisome position: 17.66

GC content: 46.91

Gene sequence:

>501_bases
ATGTCGAAAAATATTGGCTTGAACGCCATCGAAATGAGCTACTTACGCCAATCACTCAGCCTCAGTGCGGCTCAAGTAGG
ACAACTGACCAACCATAGCGAAGCCGAAGTATTAGCGTGGGAAAATGCTGAAACACAGGCCCCTGAACTGGCACAGAAAA
AGCTGCTAGATCTCGATGATATTATCGAGATGCAAGTACTGAATACCACTGACGGCATCGAAGCCTTATTCAAGAAAGAG
CCTAAGCGTCACCTAGCCTTCGTGGTGTATCCAACTCAAGCCGTTTACACCCAATATAATCCTGAATTTTTAAGCTCGCT
GCCGTTGACTGAGCTATACAATACGGCGGCATGGCGCATTAAGAAAGAATGTAAACTGGTGCTCGAAGTAGATGTTAGCT
TAGTCAATCTCGATGTCGAAGCCTACAAGGCATTCCGTGAGCAAAATGGGTTAAGCGAAAGCCGTGAAAGCCGCTCCAAA
TGGGCGGCGACTCAGCTATAA

Upstream 100 bases:

>100_bases
CTTATTGGGAATCCTTCTGGGAATGGGTCGAAGATATTTGGCTTAAAAACAAATACTGATTTTACCGAGATTTTATTTTT
ATCAACTTGAGAACCGCATT

Downstream 100 bases:

>100_bases
ACGCCTAAGGATTTAAGCAAAAAGGGCAGAAGTAAATCTTCTGCCCTTTTGTTTTTTATCGCTTTGTGCCAATTAAGCCT
GCGCTGCGTTGGCCACGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSKNIGLNAIEMSYLRQSLSLSAAQVGQLTNHSEAEVLAWENAETQAPELAQKKLLDLDDIIEMQVLNTTDGIEALFKKE
PKRHLAFVVYPTQAVYTQYNPEFLSSLPLTELYNTAAWRIKKECKLVLEVDVSLVNLDVEAYKAFREQNGLSESRESRSK
WAATQL

Sequences:

>Translated_166_residues
MSKNIGLNAIEMSYLRQSLSLSAAQVGQLTNHSEAEVLAWENAETQAPELAQKKLLDLDDIIEMQVLNTTDGIEALFKKE
PKRHLAFVVYPTQAVYTQYNPEFLSSLPLTELYNTAAWRIKKECKLVLEVDVSLVNLDVEAYKAFREQNGLSESRESRSK
WAATQL
>Mature_165_residues
SKNIGLNAIEMSYLRQSLSLSAAQVGQLTNHSEAEVLAWENAETQAPELAQKKLLDLDDIIEMQVLNTTDGIEALFKKEP
KRHLAFVVYPTQAVYTQYNPEFLSSLPLTELYNTAAWRIKKECKLVLEVDVSLVNLDVEAYKAFREQNGLSESRESRSKW
AATQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18793; Mature: 18661

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNIGLNAIEMSYLRQSLSLSAAQVGQLTNHSEAEVLAWENAETQAPELAQKKLLDLDD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHCCHHH
IIEMQVLNTTDGIEALFKKEPKRHLAFVVYPTQAVYTQYNPEFLSSLPLTELYNTAAWRI
HHHHHEECCCHHHHHHHHCCCCCEEEEEEECCHHEEECCCHHHHHHCCHHHHHHHHHHHH
KKECKLVLEVDVSLVNLDVEAYKAFREQNGLSESRESRSKWAATQL
HHHCEEEEEECEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKNIGLNAIEMSYLRQSLSLSAAQVGQLTNHSEAEVLAWENAETQAPELAQKKLLDLDD
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHCCHHH
IIEMQVLNTTDGIEALFKKEPKRHLAFVVYPTQAVYTQYNPEFLSSLPLTELYNTAAWRI
HHHHHEECCCHHHHHHHHCCCCCEEEEEEECCHHEEECCCHHHHHHCCHHHHHHHHHHHH
KKECKLVLEVDVSLVNLDVEAYKAFREQNGLSESRESRSKWAATQL
HHHCEEEEEECEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA