| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is yegP [C]
Identifier: 117919192
GI number: 117919192
Start: 860105
End: 860437
Strand: Reverse
Name: yegP [C]
Synonym: Shewana3_0740
Alternate gene names: 117919192
Gene position: 860437-860105 (Counterclockwise)
Preceding gene: 117919193
Following gene: 117919190
Centisome position: 17.3
GC content: 45.65
Gene sequence:
>333_bases ATGTCAGGATGGTATGAATTAAGCAAAAGTAGTAACGATCAATTTAAGTTTGTGCTTAAGGCTGGTAACGGAGAAGTCAT CCTCACCAGCGAACTCTACACGGGTAAGAGTGGTGCCATGAATGGTATCGAATCCGTTCAAACCAACTCCCCTATCGAAG CCCGATATGCCAAAGAAGTGGCAAAAAACGATAAGCCGTACTTCAACCTAAAAGCCGCGAACCATCAGATCATTGGCACC AGCCAAATGTATTCGAGTACCGCAGCGAGAGACAACGGGATCAAGTCGGTGATGGAGAATGGGAAAACCACGACGATTAA AGATCTAACCTAG
Upstream 100 bases:
>100_bases GTCATATCAAATCTGTGAATATCGACTACACTGGGGCTCGAGCAGGAAATGGTTTCCTCGCTTGCGCTATGCAATGCCTT AAAGAAGAAGGAGCAATTCC
Downstream 100 bases:
>100_bases ATCGGTATGTGCAGAGTGGTGATATTTAAGGAAATAAACGTACCAATAAAAAGCGGGGTTTAAAGCGGTAAGTATCTAAC AATGCTGGATTTTAGATACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MSGWYELSKSSNDQFKFVLKAGNGEVILTSELYTGKSGAMNGIESVQTNSPIEARYAKEVAKNDKPYFNLKAANHQIIGT SQMYSSTAARDNGIKSVMENGKTTTIKDLT
Sequences:
>Translated_110_residues MSGWYELSKSSNDQFKFVLKAGNGEVILTSELYTGKSGAMNGIESVQTNSPIEARYAKEVAKNDKPYFNLKAANHQIIGT SQMYSSTAARDNGIKSVMENGKTTTIKDLT >Mature_109_residues SGWYELSKSSNDQFKFVLKAGNGEVILTSELYTGKSGAMNGIESVQTNSPIEARYAKEVAKNDKPYFNLKAANHQIIGTS QMYSSTAARDNGIKSVMENGKTTTIKDLT
Specific function: Unknown
COG id: COG3422
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0339 family. Duplicated subfamily
Homologues:
Organism=Escherichia coli, GI87082037, Length=110, Percent_Identity=65.4545454545455, Blast_Score=151, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3888_SHEON (Q8EAL4)
Other databases:
- EMBL: AE014299 - RefSeq: NP_719419.1 - PDB: 2K49 - PDBsum: 2K49 - ProteinModelPortal: Q8EAL4 - SMR: Q8EAL4 - GeneID: 1171531 - GenomeReviews: AE014299_GR - KEGG: son:SO_3888 - TIGR: SO_3888 - HOGENOM: HBG287299 - OMA: ANHQVIG - ProtClustDB: CLSK815902 - BioCyc: SONE211586:SO_3888-MONOMER - InterPro: IPR010879
Pfam domain/function: PF07411 DUF1508
EC number: NA
Molecular weight: Translated: 12019; Mature: 11887
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGWYELSKSSNDQFKFVLKAGNGEVILTSELYTGKSGAMNGIESVQTNSPIEARYAKEV CCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCHHHHHHHH AKNDKPYFNLKAANHQIIGTSQMYSSTAARDNGIKSVMENGKTTTIKDLT HCCCCCEEEEECCCEEEEECHHHHHHHCCCCCCHHHHHHCCCEEEEECCC >Mature Secondary Structure SGWYELSKSSNDQFKFVLKAGNGEVILTSELYTGKSGAMNGIESVQTNSPIEARYAKEV CCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCHHHHHHHH AKNDKPYFNLKAANHQIIGTSQMYSSTAARDNGIKSVMENGKTTTIKDLT HCCCCCEEEEECCCEEEEECHHHHHHHCCCCCCHHHHHHCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813