Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is yhbJ [C]

Identifier: 117919121

GI number: 117919121

Start: 790351

End: 791205

Strand: Reverse

Name: yhbJ [C]

Synonym: Shewana3_0669

Alternate gene names: 117919121

Gene position: 791205-790351 (Counterclockwise)

Preceding gene: 117919122

Following gene: 117919120

Centisome position: 15.91

GC content: 49.71

Gene sequence:

>855_bases
ATGAAACTGGTCATAGTGTCAGGGCGCTCAGGCTCGGGCAAATCGGTCGCACTAAGAGTGCTTGAAGATCTCGGCTACTA
TTGTGTCGATAATCTTCCTTTGCCGCTGATTGGCAGCTTACTCGAACAGCTCAAGGGCAGTAACGATCTCGTCGCCATCA
GCGTCGACGTGCGTAACCTGCCGGAGCAAGACAAGGTACTCGTCAAACAGCTCGCAAGCCTGCCAGAGGGCACTGAACTT
ACCAGCTTTTTCTTAAATTCCAGCGATAAAGTACTGTTAAAGCGCTACAGCGAGACTCGGCGCTTACATCCCTTATCTAA
GAGCCGAGTATCGCTGCAGGAAGCCATTAAGCTTGAAGGCAAATTGCTCGAGCCACTGTCACAGCAAATGGATCACTACA
TAGATACCTCGAATCTGAATATCTATGAACTGAGCGACCAAGTACGGCAAATCCTGCTTGGAAGTGTCGATAAGGAACTG
GTGATCAACTTCGAGTCCTTCGGTTTTAAGCATGGTATGCCAACCGAAGCCGACTTTATGTTCGATGTGCGCTTTTTACC
CAATCCCCATTGGGAACCTGAGCTGCGCCCCCTCACCGGCTTAGATGAACCTGTGGCAGAGTTTTTAAATCGCCAGCCAC
TGGTCAATAAGTTCATCTGGCAAATCGAGAATTTACTCGAAACTTGGTTGCCCCACTTAGAGCGTAATAACCGCAGCTAT
CTGACCATAGCCATCGGCTGTACCGGCGGTCAACACAGATCGGTTTACGTGGCCGAGCAACTGGCTAAACGCTTTAGCAA
CGGCAAACACAAAGTGAATGCCCGCCATCGAGAGTTAAGTCATGCCAAAGCTTGA

Upstream 100 bases:

>100_bases
GCACTTTGTCCTGCATGGCAGAAAAGCTCAGCGACAAACAAATATTGAAGCAATTGCGCAAGACGCATGATGAAACGGAA
CTCTATCAGGTAATCACTGG

Downstream 100 bases:

>100_bases
GCGCCAAGTCACCATCTGCAATAAACTCGGCTTACATGCCCGCGCCGCCACTAAGCTCGTGGTGCTTGCGTCTGAGTTTG
ATGCCAGCATTACGCTGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGSLLEQLKGSNDLVAISVDVRNLPEQDKVLVKQLASLPEGTEL
TSFFLNSSDKVLLKRYSETRRLHPLSKSRVSLQEAIKLEGKLLEPLSQQMDHYIDTSNLNIYELSDQVRQILLGSVDKEL
VINFESFGFKHGMPTEADFMFDVRFLPNPHWEPELRPLTGLDEPVAEFLNRQPLVNKFIWQIENLLETWLPHLERNNRSY
LTIAIGCTGGQHRSVYVAEQLAKRFSNGKHKVNARHRELSHAKA

Sequences:

>Translated_284_residues
MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGSLLEQLKGSNDLVAISVDVRNLPEQDKVLVKQLASLPEGTEL
TSFFLNSSDKVLLKRYSETRRLHPLSKSRVSLQEAIKLEGKLLEPLSQQMDHYIDTSNLNIYELSDQVRQILLGSVDKEL
VINFESFGFKHGMPTEADFMFDVRFLPNPHWEPELRPLTGLDEPVAEFLNRQPLVNKFIWQIENLLETWLPHLERNNRSY
LTIAIGCTGGQHRSVYVAEQLAKRFSNGKHKVNARHRELSHAKA
>Mature_284_residues
MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGSLLEQLKGSNDLVAISVDVRNLPEQDKVLVKQLASLPEGTEL
TSFFLNSSDKVLLKRYSETRRLHPLSKSRVSLQEAIKLEGKLLEPLSQQMDHYIDTSNLNIYELSDQVRQILLGSVDKEL
VINFESFGFKHGMPTEADFMFDVRFLPNPHWEPELRPLTGLDEPVAEFLNRQPLVNKFIWQIENLLETWLPHLERNNRSY
LTIAIGCTGGQHRSVYVAEQLAKRFSNGKHKVNARHRELSHAKA

Specific function: Displays ATPase and GTPase activities [H]

COG id: COG1660

COG function: function code R; Predicted P-loop-containing kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0042 family [H]

Homologues:

Organism=Escherichia coli, GI1789598, Length=283, Percent_Identity=55.1236749116608, Blast_Score=333, Evalue=5e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005337 [H]

Pfam domain/function: PF03668 ATP_bind_2 [H]

EC number: NA

Molecular weight: Translated: 32268; Mature: 32268

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGSLLEQLKGSNDLVAISVDVRNL
CEEEEEECCCCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCC
PEQDKVLVKQLASLPEGTELTSFFLNSSDKVLLKRYSETRRLHPLSKSRVSLQEAIKLEG
CHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
KLLEPLSQQMDHYIDTSNLNIYELSDQVRQILLGSVDKELVINFESFGFKHGMPTEADFM
HHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCHHHEEEHHHHCCCCCCCCCCCEE
FDVRFLPNPHWEPELRPLTGLDEPVAEFLNRQPLVNKFIWQIENLLETWLPHLERNNRSY
EEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LTIAIGCTGGQHRSVYVAEQLAKRFSNGKHKVNARHRELSHAKA
EEEEEECCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHCCC
>Mature Secondary Structure
MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGSLLEQLKGSNDLVAISVDVRNL
CEEEEEECCCCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCC
PEQDKVLVKQLASLPEGTELTSFFLNSSDKVLLKRYSETRRLHPLSKSRVSLQEAIKLEG
CHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
KLLEPLSQQMDHYIDTSNLNIYELSDQVRQILLGSVDKELVINFESFGFKHGMPTEADFM
HHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCHHHEEEHHHHCCCCCCCCCCCEE
FDVRFLPNPHWEPELRPLTGLDEPVAEFLNRQPLVNKFIWQIENLLETWLPHLERNNRSY
EEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LTIAIGCTGGQHRSVYVAEQLAKRFSNGKHKVNARHRELSHAKA
EEEEEECCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA