| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is yhbJ [C]
Identifier: 117919121
GI number: 117919121
Start: 790351
End: 791205
Strand: Reverse
Name: yhbJ [C]
Synonym: Shewana3_0669
Alternate gene names: 117919121
Gene position: 791205-790351 (Counterclockwise)
Preceding gene: 117919122
Following gene: 117919120
Centisome position: 15.91
GC content: 49.71
Gene sequence:
>855_bases ATGAAACTGGTCATAGTGTCAGGGCGCTCAGGCTCGGGCAAATCGGTCGCACTAAGAGTGCTTGAAGATCTCGGCTACTA TTGTGTCGATAATCTTCCTTTGCCGCTGATTGGCAGCTTACTCGAACAGCTCAAGGGCAGTAACGATCTCGTCGCCATCA GCGTCGACGTGCGTAACCTGCCGGAGCAAGACAAGGTACTCGTCAAACAGCTCGCAAGCCTGCCAGAGGGCACTGAACTT ACCAGCTTTTTCTTAAATTCCAGCGATAAAGTACTGTTAAAGCGCTACAGCGAGACTCGGCGCTTACATCCCTTATCTAA GAGCCGAGTATCGCTGCAGGAAGCCATTAAGCTTGAAGGCAAATTGCTCGAGCCACTGTCACAGCAAATGGATCACTACA TAGATACCTCGAATCTGAATATCTATGAACTGAGCGACCAAGTACGGCAAATCCTGCTTGGAAGTGTCGATAAGGAACTG GTGATCAACTTCGAGTCCTTCGGTTTTAAGCATGGTATGCCAACCGAAGCCGACTTTATGTTCGATGTGCGCTTTTTACC CAATCCCCATTGGGAACCTGAGCTGCGCCCCCTCACCGGCTTAGATGAACCTGTGGCAGAGTTTTTAAATCGCCAGCCAC TGGTCAATAAGTTCATCTGGCAAATCGAGAATTTACTCGAAACTTGGTTGCCCCACTTAGAGCGTAATAACCGCAGCTAT CTGACCATAGCCATCGGCTGTACCGGCGGTCAACACAGATCGGTTTACGTGGCCGAGCAACTGGCTAAACGCTTTAGCAA CGGCAAACACAAAGTGAATGCCCGCCATCGAGAGTTAAGTCATGCCAAAGCTTGA
Upstream 100 bases:
>100_bases GCACTTTGTCCTGCATGGCAGAAAAGCTCAGCGACAAACAAATATTGAAGCAATTGCGCAAGACGCATGATGAAACGGAA CTCTATCAGGTAATCACTGG
Downstream 100 bases:
>100_bases GCGCCAAGTCACCATCTGCAATAAACTCGGCTTACATGCCCGCGCCGCCACTAAGCTCGTGGTGCTTGCGTCTGAGTTTG ATGCCAGCATTACGCTGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGSLLEQLKGSNDLVAISVDVRNLPEQDKVLVKQLASLPEGTEL TSFFLNSSDKVLLKRYSETRRLHPLSKSRVSLQEAIKLEGKLLEPLSQQMDHYIDTSNLNIYELSDQVRQILLGSVDKEL VINFESFGFKHGMPTEADFMFDVRFLPNPHWEPELRPLTGLDEPVAEFLNRQPLVNKFIWQIENLLETWLPHLERNNRSY LTIAIGCTGGQHRSVYVAEQLAKRFSNGKHKVNARHRELSHAKA
Sequences:
>Translated_284_residues MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGSLLEQLKGSNDLVAISVDVRNLPEQDKVLVKQLASLPEGTEL TSFFLNSSDKVLLKRYSETRRLHPLSKSRVSLQEAIKLEGKLLEPLSQQMDHYIDTSNLNIYELSDQVRQILLGSVDKEL VINFESFGFKHGMPTEADFMFDVRFLPNPHWEPELRPLTGLDEPVAEFLNRQPLVNKFIWQIENLLETWLPHLERNNRSY LTIAIGCTGGQHRSVYVAEQLAKRFSNGKHKVNARHRELSHAKA >Mature_284_residues MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGSLLEQLKGSNDLVAISVDVRNLPEQDKVLVKQLASLPEGTEL TSFFLNSSDKVLLKRYSETRRLHPLSKSRVSLQEAIKLEGKLLEPLSQQMDHYIDTSNLNIYELSDQVRQILLGSVDKEL VINFESFGFKHGMPTEADFMFDVRFLPNPHWEPELRPLTGLDEPVAEFLNRQPLVNKFIWQIENLLETWLPHLERNNRSY LTIAIGCTGGQHRSVYVAEQLAKRFSNGKHKVNARHRELSHAKA
Specific function: Displays ATPase and GTPase activities [H]
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family [H]
Homologues:
Organism=Escherichia coli, GI1789598, Length=283, Percent_Identity=55.1236749116608, Blast_Score=333, Evalue=5e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005337 [H]
Pfam domain/function: PF03668 ATP_bind_2 [H]
EC number: NA
Molecular weight: Translated: 32268; Mature: 32268
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGSLLEQLKGSNDLVAISVDVRNL CEEEEEECCCCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCC PEQDKVLVKQLASLPEGTELTSFFLNSSDKVLLKRYSETRRLHPLSKSRVSLQEAIKLEG CHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC KLLEPLSQQMDHYIDTSNLNIYELSDQVRQILLGSVDKELVINFESFGFKHGMPTEADFM HHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCHHHEEEHHHHCCCCCCCCCCCEE FDVRFLPNPHWEPELRPLTGLDEPVAEFLNRQPLVNKFIWQIENLLETWLPHLERNNRSY EEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE LTIAIGCTGGQHRSVYVAEQLAKRFSNGKHKVNARHRELSHAKA EEEEEECCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHCCC >Mature Secondary Structure MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGSLLEQLKGSNDLVAISVDVRNL CEEEEEECCCCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCC PEQDKVLVKQLASLPEGTELTSFFLNSSDKVLLKRYSETRRLHPLSKSRVSLQEAIKLEG CHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC KLLEPLSQQMDHYIDTSNLNIYELSDQVRQILLGSVDKELVINFESFGFKHGMPTEADFM HHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCHHHEEEHHHHCCCCCCCCCCCEE FDVRFLPNPHWEPELRPLTGLDEPVAEFLNRQPLVNKFIWQIENLLETWLPHLERNNRSY EEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE LTIAIGCTGGQHRSVYVAEQLAKRFSNGKHKVNARHRELSHAKA EEEEEECCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA