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The map label for this gene is yqhA [C]

Identifier: 117919096

GI number: 117919096

Start: 761000

End: 761488

Strand: Reverse

Name: yqhA [C]

Synonym: Shewana3_0644

Alternate gene names: 117919096

Gene position: 761488-761000 (Counterclockwise)

Preceding gene: 117919097

Following gene: 117919095

Centisome position: 15.31

GC content: 43.76

Gene sequence:

>489_bases
ATGGAAAAAATATTTGAAAGGCTAATGTACGCATCACGCTGGATTATGGCGCCCATCTACTTGGGGCTGAGTCTAGTGTT
GTTGGGTTTAGGCATTAAATTCTTCCAAGAGATCTTCCATATTCTGCCGATTATTTTTGAGATGACCGAAGTGGATCTGG
TGCTGGTCACCCTGTCCTTGATTGATATCACCCTAGTGGGCGGTCTGATTGTGATGGTGATGTTTTCTGGCTACGAGAAT
TTTGTCTCGCAGCTGGATGTCGGCGAAGACAGTGAGAAGCTCAGCTGGTTGGGTAAATTAGATTCTGGCTCACTAAAAAA
CAAAGTGGCCGCGTCCATTGTGGCGATTTCGTCTATCCACCTGCTGAAAATCTTTATGGATGTGAAGAATATCGATAACG
ACAAAATCATGTGGTATTTGCTTATCCATATCACCTTCGTGGTGTCGGCATTTGCCATGGGCTACTTGGATAAAATGACT
CGTAAATAA

Upstream 100 bases:

>100_bases
CCTTTGCGATTGGCCGATAGCGCGGCGTTAACCCAGTATGTTATTGTTTTGGCTTCATAGATTCGATTATTAAGCTTTAA
CCACTAAGGATTTACTCCAT

Downstream 100 bases:

>100_bases
ACAGCGACATCGCCCCGTAAGCGACGTTGCTGTTTGAGAGTGAGTGCTAAGCGTCACTAAACCCGCCATAGCCAAACAAT
GCCGAGTGCCAAAGATTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MEKIFERLMYASRWIMAPIYLGLSLVLLGLGIKFFQEIFHILPIIFEMTEVDLVLVTLSLIDITLVGGLIVMVMFSGYEN
FVSQLDVGEDSEKLSWLGKLDSGSLKNKVAASIVAISSIHLLKIFMDVKNIDNDKIMWYLLIHITFVVSAFAMGYLDKMT
RK

Sequences:

>Translated_162_residues
MEKIFERLMYASRWIMAPIYLGLSLVLLGLGIKFFQEIFHILPIIFEMTEVDLVLVTLSLIDITLVGGLIVMVMFSGYEN
FVSQLDVGEDSEKLSWLGKLDSGSLKNKVAASIVAISSIHLLKIFMDVKNIDNDKIMWYLLIHITFVVSAFAMGYLDKMT
RK
>Mature_162_residues
MEKIFERLMYASRWIMAPIYLGLSLVLLGLGIKFFQEIFHILPIIFEMTEVDLVLVTLSLIDITLVGGLIVMVMFSGYEN
FVSQLDVGEDSEKLSWLGKLDSGSLKNKVAASIVAISSIHLLKIFMDVKNIDNDKIMWYLLIHITFVVSAFAMGYLDKMT
RK

Specific function: Unknown

COG id: COG2862

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0114 family [H]

Homologues:

Organism=Escherichia coli, GI1789376, Length=161, Percent_Identity=70.1863354037267, Blast_Score=236, Evalue=6e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005134
- InterPro:   IPR020761
- InterPro:   IPR020765 [H]

Pfam domain/function: PF03350 UPF0114 [H]

EC number: NA

Molecular weight: Translated: 18401; Mature: 18401

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIFERLMYASRWIMAPIYLGLSLVLLGLGIKFFQEIFHILPIIFEMTEVDLVLVTLSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDITLVGGLIVMVMFSGYENFVSQLDVGEDSEKLSWLGKLDSGSLKNKVAASIVAISSIH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LLKIFMDVKNIDNDKIMWYLLIHITFVVSAFAMGYLDKMTRK
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKIFERLMYASRWIMAPIYLGLSLVLLGLGIKFFQEIFHILPIIFEMTEVDLVLVTLSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDITLVGGLIVMVMFSGYENFVSQLDVGEDSEKLSWLGKLDSGSLKNKVAASIVAISSIH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LLKIFMDVKNIDNDKIMWYLLIHITFVVSAFAMGYLDKMTRK
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA